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NAMESPACE
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NAMESPACE
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# Generated by roxygen2: do not edit by hand
export(burnAndThin)
export(computeDic)
export(computeDistanceAbc)
export(dLogPosterior)
export(dLogPosteriorWrapper)
export(dTrajObs)
export(distanceOscillation)
export(export2Tracer)
export(fitmodel)
export(margLogLikeSto)
export(mcmcMh)
export(particleFilter)
export(plotEssBurn)
export(plotFit)
export(plotHPDregion2D)
export(plotPosteriorDensity)
export(plotPosteriorFit)
export(plotSMC)
export(plotTrace)
export(plotTraj)
export(printNamedVector)
export(rTrajObs)
export(seitlDistanceOscillation)
export(simulateFinalStateAtExtinction)
export(simulateModelReplicates)
export(simulateModelStochastic)
export(testFitmodel)
export(updateCovmat)
importFrom(adaptivetau,ssa.adaptivetau)
importFrom(coda,as.mcmc)
importFrom(coda,effectiveSize)
importFrom(coda,is.mcmc)
importFrom(coda,mcmc)
importFrom(coda,mcmc.list)
importFrom(dplyr,bind_rows)
importFrom(dplyr,filter)
importFrom(dplyr,last)
importFrom(dplyr,left_join)
importFrom(dplyr,mutate)
importFrom(dplyr,n_distinct)
importFrom(emdbook,HPDregionplot)
importFrom(ggplot2,aes)
importFrom(ggplot2,aes_string)
importFrom(ggplot2,after_stat)
importFrom(ggplot2,facet_wrap)
importFrom(ggplot2,geom_area)
importFrom(ggplot2,geom_density)
importFrom(ggplot2,geom_histogram)
importFrom(ggplot2,geom_line)
importFrom(ggplot2,geom_point)
importFrom(ggplot2,geom_ribbon)
importFrom(ggplot2,ggplot)
importFrom(ggplot2,guide_legend)
importFrom(ggplot2,guides)
importFrom(ggplot2,scale_alpha)
importFrom(ggplot2,scale_alpha_manual)
importFrom(ggplot2,scale_linetype)
importFrom(ggplot2,stat_density2d)
importFrom(ggplot2,theme)
importFrom(ggplot2,theme_bw)
importFrom(ggplot2,xlab)
importFrom(ggplot2,ylab)
importFrom(lubridate,as.period)
importFrom(purrr,map)
importFrom(rlang,.data)
importFrom(rlang,inherits_any)
importFrom(stats,approx)
importFrom(stats,median)
importFrom(stats,quantile)
importFrom(stats,runif)
importFrom(stats,var)
importFrom(stringr,str_split)
importFrom(tidyr,pivot_longer)
importFrom(tidyselect,all_of)
importFrom(tmvtnorm,dtmvnorm)
importFrom(tmvtnorm,rtmvnorm)
importFrom(utils,setTxtProgressBar)
importFrom(utils,txtProgressBar)
importFrom(utils,write.table)