diff --git a/bin/awk_filter_reads.sh b/bin/awk_filter_reads.sh index 800a789..9a1b1a4 100755 --- a/bin/awk_filter_reads.sh +++ b/bin/awk_filter_reads.sh @@ -1,2 +1,2 @@ #remove the read number added earlier --yy5 -awk 'BEGIN{OFS="\t"}{if($1 ~ /^@/) {print} else {$2=and($2,compl(2048)); print substr($1,2),$2,$3,$4,$5,$6,$7,$8,$9,$10,$11}}' \ No newline at end of file +awk 'BEGIN{OFS="\t"}{if($1 ~ /^@/) {print} else {$2=and($2,compl(2048)); print substr($1,2),$2,$3,$4,$5,$6,$7,$8,$9,$10,$11}}'