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BigJob on XSEDE
melrom edited this page Sep 20, 2012
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Using BigJob on XSEDE is easy using Python virtual environments.
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Installation Guide - Explains how to install BigJob on the machine that will be submitting jobs
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BigJob Tutorial Learn more about BigJob and work through ensemble examples
Supported Adaptors
Supported Adaptors | Description | Information | Machine |
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fork | Submit jobs only on localhost head node. Password less login to localhost is required. Example usage: fork://localhost | localhost | |
SSH | Submit jobs on target machine's head node. Password-less login to target machine is required. Example usage: ssh://eric1.loni.org | Allows to submit jobs to a remote host via SSH | localhost |
PBS | Submit jobs to target machine's scheduling system. Password-less login to target machine is required. Example usage: Remote (over SSH): pbs+ssh://eric1.loni.org or Local: pbs://localhost | Interfaces with a PBS, PBS Pro or TORQUE scheduler locally or remotely via SSH | Trestles, Kraken |
SGE | Submit jobs to target machine's scheduling system. Password-less login to target machine is required. Example usage: Remote (over SSH): sge+ssh://lonestar.tacc.utexas.edu or Local: sge://localhost | Interfaces with a Sun Grid Engine (SGE) scheduler locally or remotely via SSH | Lonestar, Ranger |
GRAM | Uses Globus to submit jobs. Globus certificates are required. Initiate grid proxy (myproxy-logon) before executing the BigJob application. Example usage of URL gram://gatekeeper.ranger.tacc.teragrid.org:2119/jobmanager-sge | Please find the globus resource URLs of XSEDE machines at https://www.xsede.org/wwwteragrid/archive/web/user-support/gram-gatekeepers-gateway.html | Kraken, Lonestar, Ranger, Trestles |
Torque+GSISSH | Submit jobs using gsissh. Globus certificates are required. Initiate grid proxy (myproxy-logon) before executing the BigJob application. Example usage of URL: xt5torque+gsissh://gsissh.kraken.nics.xsede.org | Please find the GSISSH resource URLs of XSEDE machines at https://www.xsede.org/wwwteragrid/archive/web/user-support/gram-gatekeepers-gateway.html | Kraken |