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@reconhub

R Epidemics Consortium

Consortium for epidemics analysis and outbreak response using R

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  1. incidence incidence Public

    ☣:chart_with_upwards_trend::chart_with_downwards_trend:☣ Compute and visualise incidence

    R 58 13

  2. outbreaker2 outbreaker2 Public

    Disease outbreak reconstruction from epidemiological and genetic data

    R 31 20

  3. learn learn Public

    RECON learn: a free, open platform for training material on epidemics analysis

    HTML 35 30

  4. epicontacts epicontacts Public

    Handling, Visualisation and Analysis of Epidemiological Contacts

    R 15 19

  5. aweek aweek Public

    Convert dates to arbitrary week definitions 📆

    R 17 4

  6. deployer deployer Public

    Self-contained R environment on a thumb drive

    R 10 3

Repositories

Showing 10 of 69 repositories
  • outbreaker2 Public

    Disease outbreak reconstruction from epidemiological and genetic data

    reconhub/outbreaker2’s past year of commit activity
    R 31 20 7 1 Updated Sep 25, 2024
  • incidence Public

    ☣:chart_with_upwards_trend::chart_with_downwards_trend:☣ Compute and visualise incidence

    reconhub/incidence’s past year of commit activity
    R 58 13 16 3 Updated Aug 7, 2024
  • reconhub.github.io Public

    Official website for RECON - The R Epidemics CONsortium

    reconhub/reconhub.github.io’s past year of commit activity
    R 31 MIT 67 3 2 Updated Aug 2, 2024
  • epicontacts Public

    Handling, Visualisation and Analysis of Epidemiological Contacts

    reconhub/epicontacts’s past year of commit activity
    R 15 19 14 3 Updated Apr 29, 2024
  • epiflows Public

    ☣:airplane: Risk assessment of travel-related disease spread

    reconhub/epiflows’s past year of commit activity
    R 18 12 3 4 Updated Sep 20, 2023
  • epitrix Public

    Small Helpers and Tricks for Epidemics Analysis

    reconhub/epitrix’s past year of commit activity
    R 11 5 3 1 Updated Sep 20, 2023
  • task-covid19-webpage Public
    reconhub/task-covid19-webpage’s past year of commit activity
    Vue 0 0 1 5 Updated Apr 21, 2023
  • projections Public

    Projections of future incidence

    reconhub/projections’s past year of commit activity
    R 14 8 4 0 Updated Mar 23, 2023
  • linelist Public

    An R package to import, clean, and store case data

    reconhub/linelist’s past year of commit activity
    R 25 5 14 (1 issue needs help) 3 Updated Dec 9, 2022
  • aweek Public

    Convert dates to arbitrary week definitions 📆

    reconhub/aweek’s past year of commit activity
    R 17 4 4 1 Updated Oct 6, 2022
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