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1. GATB/bcalm GATB/bcalm Public

   compacted de Bruijn graph construction in low memory

   Python 99 20

2. GATB/gatb-core GATB/gatb-core Public

   Core library of the Genome Analysis Toolbox with de-Bruijn graph

   C++ 63 27

3. GATB/minia GATB/minia Public

   Minia is a short-read assembler based on a de Bruijn graph

   C++ 72 14

4. GATB/dsk GATB/dsk Public

   k-mer counting software

   Shell 38 9

5. GATB/gatb-minia-pipeline GATB/gatb-minia-pipeline Public

   GATB Minia assembly pipeline

   Perl 29 8

6. rizkg/BBHash rizkg/BBHash Public

   Bloom-filter based minimal perfect hash function library

   C++ 253 28