diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml index a6cc78c..e9182ff 100644 --- a/.github/workflows/ci.yml +++ b/.github/workflows/ci.yml @@ -24,7 +24,7 @@ jobs: uses: actions/cache@v3 with: path: ~/.local - key: install-${{ env.INSTALL_CACHE_HASH }}-2 + key: install-${{ env.INSTALL_CACHE_HASH }}-4 - name: Install Poetry if: steps.cache-installs.outputs.cache-hit != 'true' @@ -43,7 +43,7 @@ jobs: run: poetry install --extras "testing" - name: Test command - run: poetry run python bin/shadems --help + run: poetry run shadems --help - name: Run testsuite run: poetry run py.test -vvv shade_ms/ @@ -52,7 +52,7 @@ jobs: run: curl https://ratt-public-data.s3.af-south-1.amazonaws.com/test-data/HLTau_B6cont.calavg.tav300s.tar.xz | tar xJf - - name: Run end to end test - run: poetry run python bin/shadems HLTau_B6cont.calavg.tav300s + run: poetry run shadems HLTau_B6cont.calavg.tav300s # deploy: diff --git a/.github/workflows/publish_package.yml b/.github/workflows/publish_package.yml index 981dde6..f68aa89 100644 --- a/.github/workflows/publish_package.yml +++ b/.github/workflows/publish_package.yml @@ -13,18 +13,18 @@ jobs: runs-on: ubuntu-latest steps: - - uses: actions/checkout@v2 + - uses: actions/checkout@v3 - name: Set up Python uses: actions/setup-python@v4 with: - python-version: '3.x' + python-version: '3.10' - name: Cache Installations id: cache-installs uses: actions/cache@v3 with: path: ~/.local - key: install-${{ env.INSTALL_CACHE_HASH }}-2 + key: install-${{ env.INSTALL_CACHE_HASH }}-3 - name: Install Poetry if: steps.cache-installs.outputs.cache-hit != 'true' diff --git a/bin/shadems b/bin/shadems deleted file mode 100755 index a6a555c..0000000 --- a/bin/shadems +++ /dev/null @@ -1,8 +0,0 @@ -#!/usr/bin/env python - -import os -import sys - -from shade_ms import main - -main.main([a for a in sys.argv[1:]]) diff --git a/poetry.lock b/poetry.lock new file mode 100644 index 0000000..ce78949 --- /dev/null +++ b/poetry.lock @@ -0,0 +1,1883 @@ +# This file is automatically @generated by Poetry 1.4.0 and should not be changed by hand. + +[[package]] +name = "appdirs" +version = "1.4.4" +description = "A small Python module for determining appropriate platform-specific dirs, e.g. a \"user data dir\"." +category = "main" +optional = false +python-versions = "*" +files = [ + {file = "appdirs-1.4.4-py2.py3-none-any.whl", hash = "sha256:a841dacd6b99318a741b166adb07e19ee71a274450e68237b4650ca1055ab128"}, + {file = "appdirs-1.4.4.tar.gz", hash = "sha256:7d5d0167b2b1ba821647616af46a749d1c653740dd0d2415100fe26e27afdf41"}, +] + +[[package]] +name = "bleach" +version = "6.0.0" +description = "An easy safelist-based HTML-sanitizing tool." +category = "main" +optional = false +python-versions = ">=3.7" +files = [ + {file = "bleach-6.0.0-py3-none-any.whl", hash = "sha256:33c16e3353dbd13028ab4799a0f89a83f113405c766e9c122df8a06f5b85b3f4"}, + {file = "bleach-6.0.0.tar.gz", hash = "sha256:1a1a85c1595e07d8db14c5f09f09e6433502c51c595970edc090551f0db99414"}, +] + +[package.dependencies] +six = ">=1.9.0" +webencodings = "*" + +[package.extras] +css = ["tinycss2 (>=1.1.0,<1.2)"] + +[[package]] +name = "bokeh" +version = "3.1.1" +description = "Interactive plots and applications in the browser from Python" +category = "main" +optional = false +python-versions = ">=3.8" +files = [ + {file = "bokeh-3.1.1-py3-none-any.whl", hash = "sha256:a542a076ce326f81bf6d226355458572d39fe8fc9b547eab9728a2f1d71e4bdb"}, + {file = "bokeh-3.1.1.tar.gz", hash = "sha256:ba0fc6bae4352d307541293256dee930a42d0acf92e760c72dc0e7397c3a28e9"}, +] + +[package.dependencies] +contourpy = ">=1" +Jinja2 = ">=2.9" +numpy = ">=1.16" +packaging = ">=16.8" +pandas = ">=1.2" +pillow = ">=7.1.0" +PyYAML = ">=3.10" +tornado = ">=5.1" +xyzservices = ">=2021.09.1" + +[[package]] +name = "certifi" +version = "2023.5.7" +description = "Python package for providing Mozilla's CA Bundle." +category = "main" +optional = false +python-versions = ">=3.6" +files = [ + {file = "certifi-2023.5.7-py3-none-any.whl", hash = "sha256:c6c2e98f5c7869efca1f8916fed228dd91539f9f1b444c314c06eef02980c716"}, + {file = "certifi-2023.5.7.tar.gz", hash = "sha256:0f0d56dc5a6ad56fd4ba36484d6cc34451e1c6548c61daad8c320169f91eddc7"}, +] + +[[package]] +name = "charset-normalizer" +version = "3.1.0" +description = "The Real First Universal Charset Detector. 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"Rapid Measurement Set plotting with dask-ms and datashader" authors = ["Ian Heywood & RATT "] license = "GPL-2.0-only" @@ -21,7 +21,7 @@ packages = [ ] [tool.poetry.scripts] -shadems = {reference = "bin/shadems", type = "file"} +shadems = "shade_ms.main:driver" [tool.poetry.dependencies] python = "^3.8" diff --git a/shade_ms/main.py b/shade_ms/main.py index 6ace529..c86bb90 100644 --- a/shade_ms/main.py +++ b/shade_ms/main.py @@ -573,3 +573,6 @@ def render_single_plot(df, subset, xdatum, ydatum, adatum, ared, cdatum, pngname log.info('Finished') separator() + +def driver(): + main([a for a in sys.argv[1:]])