pip installing package in CI (#5)

raphael-group · Aug 9, 2024 · 9bdebd2 · 9bdebd2
1 parent ed59977
commit 9bdebd2
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diff --git a/.github/workflows/build.yml b/.github/workflows/build.yml
@@ -33,5 +33,8 @@ jobs:
           activate-environment: paste
           environment-file: environment.yml
 
+      - name: Install package
+        run: pip install .
+
       - name: Pytest
         run: pytest
diff --git a/tests/test_paste.py b/tests/test_paste.py
@@ -6,7 +6,7 @@
 import pandas as pd
 import tempfile
 
-from src.paste import pairwise_align, center_align, center_ot, intersect, center_NMF
+from paste import pairwise_align, center_align, center_ot, intersect, center_NMF
 
 test_dir = Path(__file__).parent
 input_dir = test_dir / "data/input"