From 24b1b9b498bb1bc9db966d1302bcb79402f9c147 Mon Sep 17 00:00:00 2001 From: "renovate[bot]" <29139614+renovate[bot]@users.noreply.github.com> Date: Thu, 5 Oct 2023 12:04:58 -0700 Subject: [PATCH 1/3] Update aws-actions/configure-aws-credentials action to v4 (#138) MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit [![Mend Renovate](https://app.renovatebot.com/images/banner.svg)](https://renovatebot.com) This PR contains the following updates: | Package | Type | Update | Change | |---|---|---|---| | [aws-actions/configure-aws-credentials](https://togithub.com/aws-actions/configure-aws-credentials) | action | major | `v3` -> `v4` | --- ### Release Notes
aws-actions/configure-aws-credentials (aws-actions/configure-aws-credentials) ### [`v4`](https://togithub.com/aws-actions/configure-aws-credentials/releases/tag/v4) [Compare Source](https://togithub.com/aws-actions/configure-aws-credentials/compare/v3...v4) This tag tracks the latest v4.x.x release
--- ### Configuration 📅 **Schedule**: Branch creation - At any time (no schedule defined), Automerge - At any time (no schedule defined). 🚦 **Automerge**: Disabled by config. Please merge this manually once you are satisfied. ♻ **Rebasing**: Whenever PR becomes conflicted, or you tick the rebase/retry checkbox. 🔕 **Ignore**: Close this PR and you won't be reminded about this update again. --- - [ ] If you want to rebase/retry this PR, check this box --- This PR has been generated by [Mend Renovate](https://www.mend.io/free-developer-tools/renovate/). View repository job log [here](https://developer.mend.io/github/quiltdata/nf-quilt). Co-authored-by: renovate[bot] <29139614+renovate[bot]@users.noreply.github.com> --- .github/workflows/pkg-test.yml | 2 +- .github/workflows/test.yml | 2 +- 2 files changed, 2 insertions(+), 2 deletions(-) diff --git a/.github/workflows/pkg-test.yml b/.github/workflows/pkg-test.yml index 51317a7c..73c74fcc 100644 --- a/.github/workflows/pkg-test.yml +++ b/.github/workflows/pkg-test.yml @@ -33,7 +33,7 @@ jobs: fetch-depth: 0 - name: Configure AWS Credentials - uses: aws-actions/configure-aws-credentials@v3 + uses: aws-actions/configure-aws-credentials@v4 with: role-to-assume: arn:aws:iam::712023778557:role/GitHub-Testing-NF-Quilt aws-region: us-east-1 diff --git a/.github/workflows/test.yml b/.github/workflows/test.yml index 4f3a22e4..2239aebe 100644 --- a/.github/workflows/test.yml +++ b/.github/workflows/test.yml @@ -33,7 +33,7 @@ jobs: fetch-depth: 0 - name: Configure AWS Credentials - uses: aws-actions/configure-aws-credentials@v3 + uses: aws-actions/configure-aws-credentials@v4 with: role-to-assume: arn:aws:iam::712023778557:role/GitHub-Testing-NF-Quilt aws-region: us-east-1 From d54ca6b45a7149f6fd57b6fee4e898b14a4f8cb0 Mon Sep 17 00:00:00 2001 From: "renovate[bot]" <29139614+renovate[bot]@users.noreply.github.com> Date: Thu, 5 Oct 2023 12:05:12 -0700 Subject: [PATCH 2/3] Update actions/checkout digest to 8ade135 (#136) MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit [![Mend Renovate](https://app.renovatebot.com/images/banner.svg)](https://renovatebot.com) This PR contains the following updates: | Package | Type | Update | Change | |---|---|---|---| | [actions/checkout](https://togithub.com/actions/checkout) | action | digest | `3df4ab1` -> `8ade135` | --- ### Configuration 📅 **Schedule**: Branch creation - At any time (no schedule defined), Automerge - At any time (no schedule defined). 🚦 **Automerge**: Disabled by config. Please merge this manually once you are satisfied. ♻ **Rebasing**: Whenever PR becomes conflicted, or you tick the rebase/retry checkbox. 🔕 **Ignore**: Close this PR and you won't be reminded about this update again. --- - [ ] If you want to rebase/retry this PR, check this box --- This PR has been generated by [Mend Renovate](https://www.mend.io/free-developer-tools/renovate/). View repository job log [here](https://developer.mend.io/github/quiltdata/nf-quilt). Co-authored-by: renovate[bot] <29139614+renovate[bot]@users.noreply.github.com> --- .github/workflows/mega-linter.yml | 2 +- .github/workflows/pkg-test.yml | 2 +- .github/workflows/test.yml | 2 +- 3 files changed, 3 insertions(+), 3 deletions(-) diff --git a/.github/workflows/mega-linter.yml b/.github/workflows/mega-linter.yml index a58224a7..fa274ab1 100644 --- a/.github/workflows/mega-linter.yml +++ b/.github/workflows/mega-linter.yml @@ -27,7 +27,7 @@ jobs: steps: # Git Checkout - name: Checkout Code - uses: actions/checkout@3df4ab11eba7bda6032a0b82a6bb43b11571feac # v4 + uses: actions/checkout@8ade135a41bc03ea155e62e844d188df1ea18608 # v4 with: token: ${{ secrets.PAT || secrets.GITHUB_TOKEN }} fetch-depth: 0 # If you use VALIDATE_ALL_CODEBASE = true, you can remove this line to improve performances diff --git a/.github/workflows/pkg-test.yml b/.github/workflows/pkg-test.yml index 73c74fcc..f6d81f05 100644 --- a/.github/workflows/pkg-test.yml +++ b/.github/workflows/pkg-test.yml @@ -27,7 +27,7 @@ jobs: steps: # Git Checkout - name: Checkout Code - uses: actions/checkout@3df4ab11eba7bda6032a0b82a6bb43b11571feac # v4 + uses: actions/checkout@8ade135a41bc03ea155e62e844d188df1ea18608 # v4 with: token: ${{ secrets.GITHUB_TOKEN }} fetch-depth: 0 diff --git a/.github/workflows/test.yml b/.github/workflows/test.yml index 2239aebe..8fd666fb 100644 --- a/.github/workflows/test.yml +++ b/.github/workflows/test.yml @@ -27,7 +27,7 @@ jobs: steps: # Git Checkout - name: Checkout Code - uses: actions/checkout@3df4ab11eba7bda6032a0b82a6bb43b11571feac # v4 + uses: actions/checkout@8ade135a41bc03ea155e62e844d188df1ea18608 # v4 with: token: ${{ secrets.GITHUB_TOKEN }} fetch-depth: 0 From ca180506c0ebb7ab756ae387a55a7758895f813f Mon Sep 17 00:00:00 2001 From: "renovate[bot]" <29139614+renovate[bot]@users.noreply.github.com> Date: Thu, 5 Oct 2023 12:05:25 -0700 Subject: [PATCH 3/3] Update dependency gradle to v8.4 (#134) MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit [![Mend Renovate](https://app.renovatebot.com/images/banner.svg)](https://renovatebot.com) This PR contains the following updates: | Package | Update | Change | |---|---|---| | [gradle](https://gradle.org) ([source](https://togithub.com/gradle/gradle)) | minor | `8.3` -> `8.4` | --- ### Release Notes
gradle/gradle (gradle) ### [`v8.4`](https://togithub.com/gradle/gradle/compare/v8.3.0...v8.4.0) [Compare Source](https://togithub.com/gradle/gradle/compare/v8.3.0...v8.4.0)
--- ### Configuration 📅 **Schedule**: Branch creation - At any time (no schedule defined), Automerge - At any time (no schedule defined). 🚦 **Automerge**: Disabled by config. Please merge this manually once you are satisfied. ♻ **Rebasing**: Whenever PR becomes conflicted, or you tick the rebase/retry checkbox. 🔕 **Ignore**: Close this PR and you won't be reminded about this update again. --- - [ ] If you want to rebase/retry this PR, check this box --- This PR has been generated by [Mend Renovate](https://www.mend.io/free-developer-tools/renovate/). View repository job log [here](https://developer.mend.io/github/quiltdata/nf-quilt). Co-authored-by: renovate[bot] <29139614+renovate[bot]@users.noreply.github.com> --- gradle/wrapper/gradle-wrapper.properties | 2 +- gradlew | 14 +++++++------- 2 files changed, 8 insertions(+), 8 deletions(-) diff --git a/gradle/wrapper/gradle-wrapper.properties b/gradle/wrapper/gradle-wrapper.properties index ac72c34e..3fa8f862 100644 --- a/gradle/wrapper/gradle-wrapper.properties +++ b/gradle/wrapper/gradle-wrapper.properties @@ -1,6 +1,6 @@ distributionBase=GRADLE_USER_HOME distributionPath=wrapper/dists -distributionUrl=https\://services.gradle.org/distributions/gradle-8.3-bin.zip +distributionUrl=https\://services.gradle.org/distributions/gradle-8.4-bin.zip networkTimeout=10000 validateDistributionUrl=true zipStoreBase=GRADLE_USER_HOME diff --git a/gradlew b/gradlew index 0adc8e1a..1aa94a42 100755 --- a/gradlew +++ b/gradlew @@ -145,7 +145,7 @@ if ! "$cygwin" && ! "$darwin" && ! "$nonstop" ; then case $MAX_FD in #( max*) # In POSIX sh, ulimit -H is undefined. That's why the result is checked to see if it worked. - # shellcheck disable=SC3045 + # shellcheck disable=SC2039,SC3045 MAX_FD=$( ulimit -H -n ) || warn "Could not query maximum file descriptor limit" esac @@ -153,7 +153,7 @@ if ! "$cygwin" && ! "$darwin" && ! "$nonstop" ; then '' | soft) :;; #( *) # In POSIX sh, ulimit -n is undefined. That's why the result is checked to see if it worked. - # shellcheck disable=SC3045 + # shellcheck disable=SC2039,SC3045 ulimit -n "$MAX_FD" || warn "Could not set maximum file descriptor limit to $MAX_FD" esac @@ -202,11 +202,11 @@ fi # Add default JVM options here. You can also use JAVA_OPTS and GRADLE_OPTS to pass JVM options to this script. DEFAULT_JVM_OPTS='"-Xmx64m" "-Xms64m"' -# Collect all arguments for the java command; -# * $DEFAULT_JVM_OPTS, $JAVA_OPTS, and $GRADLE_OPTS can contain fragments of -# shell script including quotes and variable substitutions, so put them in -# double quotes to make sure that they get re-expanded; and -# * put everything else in single quotes, so that it's not re-expanded. +# Collect all arguments for the java command: +# * DEFAULT_JVM_OPTS, JAVA_OPTS, JAVA_OPTS, and optsEnvironmentVar are not allowed to contain shell fragments, +# and any embedded shellness will be escaped. +# * For example: A user cannot expect ${Hostname} to be expanded, as it is an environment variable and will be +# treated as '${Hostname}' itself on the command line. set -- \ "-Dorg.gradle.appname=$APP_BASE_NAME" \