ci.yaml

name: CI

on: [push, pull_request]

jobs:
  test:
    runs-on: ${{ matrix.os }}
    continue-on-error: ${{ matrix.experimental }}
    strategy:
      fail-fast: true
      matrix:
        os: ["ubuntu-latest"]
        python-version: ["3.8", "3.9", "3.10"]
        experimental: [false]

    env:
      PYTHON_VERSION: ${{ matrix.python-version }}
      OS: ${{ matrix.os }}

    steps:
      - name: Checkout source
        uses: actions/checkout@v4

      - name: Setup Conda Environment
        uses: conda-incubator/setup-miniconda@v2
        with:
          miniforge-variant: Mambaforge
          miniforge-version: latest
          use-mamba: true
          python-version: ${{ matrix.python-version }}
          environment-file: continuous_integration/environment.yaml
          activate-environment: test-environment

      - name: Install pygac-fdr
        shell: bash -l {0}
        run: |
          pip install --no-deps -e  .

      - name: Run unit tests
        shell: bash -l {0}
        run: |
          pytest --cov=pygac_fdr pygac_fdr/tests --ignore=pygac_fdr/tests/test_end2end.py --cov-report=xml

      - name: Upload unittest coverage
        uses: codecov/codecov-action@v2
        with:
          file: ./coverage.xml
          env_vars: OS,PYTHON_VERSION