diff --git a/.github/CONTRIBUTING.md b/.github/CONTRIBUTING.md new file mode 100644 index 00000000..4f6fc36f --- /dev/null +++ b/.github/CONTRIBUTING.md @@ -0,0 +1,11 @@ +# Contributing Guidelines for `spglm` + +Thank you for your interest in contributing! We work primarily on Github. Please review the contributing procedures [here](http://pysal.org/getting_started#for-developers) and [here](https://github.com/pysal/pysal/wiki/GitHub-Standard-Operating-Procedures) so that we can accept your contributions! Alternatively, contact someone in the [development chat channel](https://gitter.im//pysal/pysal). + + +## Style and format + +This project utilizes: +* [`black`](https://black.readthedocs.io/en/stable/) for formatting; +* [`ruff`](https://docs.astral.sh/ruff/) for linting; and +* [`pre-commit`](https://pre-commit.com) to check format and lint on commits prior to pull requests being made. \ No newline at end of file diff --git a/.github/release.yml b/.github/release.yml new file mode 100644 index 00000000..f5435449 --- /dev/null +++ b/.github/release.yml @@ -0,0 +1,16 @@ +changelog: + exclude: + labels: + - ignore-for-release + authors: + - dependabot + categories: + - title: Bug Fixes + labels: + - bug + - title: Enhancements + labels: + - enhancement + - title: Other Changes + labels: + - "*" diff --git a/.github/workflows/build_docs.yml b/.github/workflows/build_docs.yml new file mode 100644 index 00000000..fdd2755c --- /dev/null +++ b/.github/workflows/build_docs.yml @@ -0,0 +1,62 @@ + name: Build Docs + + on: + push: + # Sequence of patterns matched against refs/tags + tags: + - 'v*' # Push events to matching v*, i.e. v1.0, v20.15.10 + workflow_dispatch: + inputs: + version: + description: Manual Doc Build Reason + default: test + required: false + jobs: + docs: + name: build & push docs + runs-on: ${{ matrix.os }} + timeout-minutes: 90 + strategy: + matrix: + os: ['ubuntu-latest'] + environment-file: [.ci/311.yaml] + experimental: [false] + defaults: + run: + shell: bash -l {0} + + steps: + - name: checkout repo + uses: actions/checkout@v4 + + - name: setup micromamba + uses: mamba-org/setup-micromamba@v1 + with: + environment-file: ${{ matrix.environment-file }} + micromamba-version: 'latest' + + - name: Install package + run: pip install . + + - name: make docs + run: cd docs; make html + + - name: commit docs + run: | + git clone https://github.com/ammaraskar/sphinx-action-test.git --branch gh-pages --single-branch gh-pages + cp -r docs/_build/html/* gh-pages/ + cd gh-pages + git config --local user.email "action@github.com" + git config --local user.name "GitHub Action" + git add . + git commit -m "Update documentation" -a || true + # The above command will fail if no changes were present, + # so we ignore the return code. + + - name: push to gh-pages + uses: ad-m/github-push-action@master + with: + branch: gh-pages + directory: gh-pages + github_token: ${{ secrets.GITHUB_TOKEN }} + force: true diff --git a/.github/workflows/release_and_publish.yml b/.github/workflows/release_and_publish.yml new file mode 100644 index 00000000..b29048be --- /dev/null +++ b/.github/workflows/release_and_publish.yml @@ -0,0 +1,48 @@ +name: Release Package + +on: + push: + # Sequence of patterns matched against refs/tags + tags: + - 'v*' # Push events to matching v*, i.e. v1.0, v20.15.10 + workflow_dispatch: + inputs: + version: + description: Manual Release + default: test + required: false + +jobs: + build: + runs-on: ubuntu-latest + steps: + + - name: Checkout repo + uses: actions/checkout@v4 + + - name: Set up Python + uses: actions/setup-python@v4 + with: + python-version: '3.x' + + - name: Install Dependencies + run: | + python -m pip install --upgrade pip build twine + python -m build + twine check --strict dist/* + + - name: Create Release Notes + uses: actions/github-script@v6 + with: + github-token: ${{secrets.GITHUB_TOKEN}} + script: | + await github.request(`POST /repos/${{ github.repository }}/releases`, { + tag_name: "${{ github.ref }}", + generate_release_notes: true + }); + + - name: Publish distribution 📦 to PyPI + uses: pypa/gh-action-pypi-publish@release/v1 + with: + user: __token__ + password: ${{ secrets.PYPI_PASSWORD }} diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml new file mode 100644 index 00000000..8ed5f101 --- /dev/null +++ b/.pre-commit-config.yaml @@ -0,0 +1,15 @@ +files: "spglm\/" +repos: + - repo: https://github.com/psf/black + rev: "23.9.1" + hooks: + - id: black + language_version: python3 + - repo: https://github.com/astral-sh/ruff-pre-commit + rev: "v0.1.2" + hooks: + - id: ruff + +ci: + autofix_prs: false + autoupdate_schedule: quarterly diff --git a/.travis.yml b/.travis.yml deleted file mode 100644 index 96429600..00000000 --- a/.travis.yml +++ /dev/null @@ -1,61 +0,0 @@ -language: python -dist: xenial -sudo: true -branches: - only: - - master -python: - - 3.6 - - 3.7 - -env: - - PYSAL_PYPI=true #testing on dependencies libpysal, esda, mapcalssify on pypi - - PYSAL_PYPI=false - -matrix: - allow_failures: - - python: 3.6 - env: PYSAL_PYPI=false - - python: 3.7 - env: PYSAL_PYPI=false - -before_install: - - wget https://repo.continuum.io/miniconda/Miniconda3-latest-Linux-x86_64.sh -O miniconda.sh - - chmod +x miniconda.sh - - ./miniconda.sh -b -p ./miniconda - - export PATH=`pwd`/miniconda/bin:$PATH - - conda update --yes conda - - conda config --add channels conda-forge - - conda create -y -q -n test-env python=$TRAVIS_PYTHON_VERSION - - source activate test-env - -install: - - conda install --yes pip - - pip install -r requirements.txt - - pip install -r requirements_tests.txt - - if "$PYSAL_PYPI"; then - echo 'testing pypi libpysal spreg' && pip install libpysal spreg; - else - echo 'testing git libpysal spreg'; - git clone https://github.com/pysal/libpysal.git; - cd libpysal; pip install .; cd ../; - git clone https://github.com/pysal/spreg.git; - cd spreg; pip install .; cd ../; - fi; - - - -script: - - python setup.py sdist >/dev/null - - python setup.py install - - nosetests --with-coverage --cover-package=spglm; - -notifications: - email: - recipients: - - tayoshan@gmail.com - on_change: change - on_failure: always - -after_success: - - coveralls diff --git a/LICENSE b/LICENSE.txt similarity index 100% rename from LICENSE rename to LICENSE.txt diff --git a/MANIFEST.in b/MANIFEST.in deleted file mode 100644 index dfc93223..00000000 --- a/MANIFEST.in +++ /dev/null @@ -1,2 +0,0 @@ -include LICENSE.txt CHANGELOG.txt MANIFEST.in requirements_docs.txt requirements_tests.txt requirements.txt - diff --git a/codecov.yml b/codecov.yml new file mode 100644 index 00000000..7640976c --- /dev/null +++ b/codecov.yml @@ -0,0 +1,22 @@ +codecov: + notify: + after_n_builds: 5 +coverage: + range: 50..95 + round: nearest + precision: 1 + status: + project: + default: + threshold: 2% + patch: + default: + threshold: 2% + target: 80% + ignore: + - "tests/*" +comment: + layout: "reach, diff, files" + behavior: once + after_n_builds: 5 + require_changes: true diff --git a/docs/Makefile b/docs/Makefile index 6d699fe2..f00d45e8 100644 --- a/docs/Makefile +++ b/docs/Makefile @@ -17,8 +17,18 @@ help: # Catch-all target: route all unknown targets to Sphinx using the new # "make mode" option. $(O) is meant as a shortcut for $(SPHINXOPTS). %: Makefile + @rsync -r --exclude '.ipynb_checkpoints/' ../notebooks/ ./notebooks/ @$(SPHINXBUILD) -M $@ "$(SOURCEDIR)" "$(BUILDDIR)" $(SPHINXOPTS) $(O) +github: + @make html + +sync: + @rsync -avh _build/html/ ../docs/ --delete + @make clean + touch .nojekyll + clean: rm -rf $(BUILDDIR)/* rm -rf auto_examples/ + rm -rf generated/ diff --git a/docs/_build/doctrees/api.doctree b/docs/_build/doctrees/api.doctree deleted file mode 100644 index c0e03929..00000000 Binary files a/docs/_build/doctrees/api.doctree and /dev/null differ diff --git a/docs/_build/doctrees/environment.pickle b/docs/_build/doctrees/environment.pickle deleted file mode 100644 index 8580c959..00000000 Binary files a/docs/_build/doctrees/environment.pickle and /dev/null differ diff --git a/docs/_build/doctrees/generated/spglm.glm.GLM.doctree b/docs/_build/doctrees/generated/spglm.glm.GLM.doctree deleted file mode 100644 index 081a51b5..00000000 Binary files a/docs/_build/doctrees/generated/spglm.glm.GLM.doctree and /dev/null differ diff --git a/docs/_build/doctrees/index.doctree b/docs/_build/doctrees/index.doctree deleted file mode 100644 index 9a943dc1..00000000 Binary files a/docs/_build/doctrees/index.doctree and /dev/null differ diff --git a/docs/_build/doctrees/installation.doctree b/docs/_build/doctrees/installation.doctree deleted file mode 100644 index 856ed742..00000000 Binary files a/docs/_build/doctrees/installation.doctree and /dev/null differ diff --git a/docs/_build/doctrees/references.doctree b/docs/_build/doctrees/references.doctree deleted file mode 100644 index 5f3b9fee..00000000 Binary files a/docs/_build/doctrees/references.doctree and /dev/null differ diff --git a/docs/_build/html/.buildinfo b/docs/_build/html/.buildinfo deleted file mode 100644 index 068a2aa5..00000000 --- a/docs/_build/html/.buildinfo +++ /dev/null @@ -1,4 +0,0 @@ -# Sphinx build info version 1 -# This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done. -config: 6e3e615c61a74a0c1be1058a0f731922 -tags: 645f666f9bcd5a90fca523b33c5a78b7 diff --git a/docs/_build/html/_modules/index.html b/docs/_build/html/_modules/index.html deleted file mode 100644 index 9be855c4..00000000 --- a/docs/_build/html/_modules/index.html +++ /dev/null @@ -1,147 +0,0 @@ - - - - - - - - Overview: module code — spglm v1.0.5 Manual - - - - - - - - - - - - - - - - - - - - - - - - - - -
-
-
- -

All modules for which code is available

- - -
- -
-
- - - \ No newline at end of file diff --git a/docs/_build/html/_modules/spglm/glm.html b/docs/_build/html/_modules/spglm/glm.html deleted file mode 100644 index 546eb2e3..00000000 --- a/docs/_build/html/_modules/spglm/glm.html +++ /dev/null @@ -1,551 +0,0 @@ - - - - - - - - spglm.glm — spglm v1.0.5 Manual - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-
-
- -

Source code for spglm.glm

-# Main GLM classes
-
-__author__ = "Taylor Oshan tayoshan@gmail.com"
-
-import numpy as np
-import numpy.linalg as la
-from spreg.utils import RegressionPropsY, spdot
-from spreg import user_output as USER
-from .utils import cache_readonly
-from .base import LikelihoodModelResults
-from .iwls import iwls
-from . import family
-
-__all__ = ['GLM']
-
-
-
[docs]class GLM(RegressionPropsY): - """ - Generalised linear models. Can currently estimate Guassian, Poisson and - Logisitc regression coefficients. GLM object prepares model input and fit - method performs estimation which then returns a GLMResults object. - - Parameters - ---------- - y : array - n*1, dependent variable. - X : array - n*k, independent variable, exlcuding the constant. - family : string - Model type: 'Gaussian', 'Poisson', 'Binomial' - offset : array - n*1, the offset variable at the ith location. For Poisson model - this term is often the size of the population at risk or - the expected size of the outcome in spatial epidemiology. - Default is None where Ni becomes 1.0 for all locations. - y_fix : array - n*1, the fix intercept value of y - - Attributes - ---------- - y : array - n*1, dependent variable. - X : array - n*k, independent variable, including constant. - family : string - Model type: 'Gaussian', 'Poisson', 'logistic' - n : integer - Number of observations - k : integer - Number of independent variables - df_model : float - k-1, where k is the number of variables (including - intercept) - df_residual : float - observations minus variables (n-k) - mean_y : float - Mean of y - std_y : float - Standard deviation of y - fit_params : dict - Parameters passed into fit method to define estimation - routine. - - Examples - -------- - >>> import libpysal - >>> from spglm.glm import GLM - >>> from spglm.family import Gaussian - >>> db = libpysal.io.open(libpysal.examples.get_path('columbus.dbf'),'r') - >>> y = np.array(db.by_col("HOVAL")) - >>> y = np.reshape(y, (49,1)) - >>> X = [] - >>> X.append(db.by_col("INC")) - >>> X.append(db.by_col("CRIME")) - >>> X = np.array(X).T - >>> model = GLM(y, X, family=Gaussian()) - >>> results = model.fit() - >>> results.params - array([46.42818268, 0.62898397, -0.48488854]) - - """ - -
[docs] def __init__(self, y, X, family=family.Gaussian(), offset=None, y_fix=None, - constant=True): - """ - Initialize class - """ - self.n = USER.check_arrays(y, X) - USER.check_y(y, self.n) - self.y = y - if constant: - self.X = USER.check_constant(X) - else: - self.X = X - self.family = family - self.k = self.X.shape[1] - if offset is None: - self.offset = np.ones(shape=(self.n, 1)) - else: - self.offset = offset * 1.0 - if y_fix is None: - self.y_fix = np.zeros(shape=(self.n, 1)) - else: - self.y_fix = y_fix - self.fit_params = {}
- - def fit(self, ini_betas=None, tol=1.0e-6, max_iter=200, solve='iwls'): - """ - Method that fits a model with a particular estimation routine. - - Parameters - ---------- - - ini_betas : array - k*1, initial coefficient values, including constant. - Default is None, which calculates initial values during - estimation. - tol: float - Tolerence for estimation convergence. - max_iter : integer - Maximum number of iterations if convergence not - achieved. - solve :string - Technique to solve MLE equations. - 'iwls' = iteratively (re)weighted least squares (default) - """ - self.fit_params['ini_betas'] = ini_betas - self.fit_params['tol'] = tol - self.fit_params['max_iter'] = max_iter - self.fit_params['solve'] = solve - if solve.lower() == 'iwls': - params, predy, w, n_iter = iwls( - self.y, self.X, self.family, self.offset, self.y_fix, ini_betas, tol, max_iter) - self.fit_params['n_iter'] = n_iter - return GLMResults(self, params.flatten(), predy, w) - - @cache_readonly - def df_model(self): - return self.X.shape[1] - 1 - - @cache_readonly - def df_resid(self): - return self.n - self.df_model - 1
- - -
[docs]class GLMResults(LikelihoodModelResults): - """ - Results of estimated GLM and diagnostics. - - Parameters - ---------- - model : GLM object - Pointer to GLM object with estimation parameters. - params : array - k*1, estimared coefficients - mu : array - n*1, predicted y values. - w : array - n*1, final weight used for iwls - - Attributes - ---------- - model : GLM Object - Points to GLM object for which parameters have been - estimated. - y : array - n*1, dependent variable. - x : array - n*k, independent variable, including constant. - family : string - Model type: 'Gaussian', 'Poisson', 'Logistic' - n : integer - Number of observations - k : integer - Number of independent variables - df_model : float - k-1, where k is the number of variables (including - intercept) - df_residual : float - observations minus variables (n-k) - fit_params : dict - parameters passed into fit method to define estimation - routine. - scale : float - sigma squared used for subsequent computations. - params : array - n*k, estimared beta coefficients - w : array - n*1, final weight values of x - mu : array - n*1, predicted value of y (i.e., fittedvalues) - cov_params : array - Variance covariance matrix (kxk) of betas - bse : array - k*1, standard errors of betas - pvalues : array - k*1, two-tailed pvalues of parameters - tvalues : array - k*1, the tvalues of the standard errors - null : array - n*1, predicted values of y for null model - deviance : float - value of the deviance function evalued at params; - see family.py for distribution-specific deviance - null_deviance : float - value of the deviance function for the model fit with - a constant as the only regressor - llf : float - value of the loglikelihood function evalued at params; - see family.py for distribution-specific loglikelihoods - llnull : float - value of log-likelihood function evaluated at null - aic : float - AIC - bic : float - BIC - D2 : float - percent deviance explained - adj_D2 : float - adjusted percent deviance explained - pseudo_R2 : float - McFadden's pseudo R2 (coefficient of determination) - adj_pseudoR2 : float - adjusted McFadden's pseudo R2 - tr_S : trace of the hat matrix S - resid_response : array - response residuals; defined as y-mu - resid_pearson : array - Pearson residuals; defined as (y-mu)/sqrt(VAR(mu)) - where VAR is the distribution specific variance - function; see family.py and varfuncs.py for more information. - resid_working : array - Working residuals; the working residuals are defined as - resid_response/link'(mu); see links.py for the - derivatives of the link functions. - - resid_anscombe : array - Anscombe residuals; see family.py for - distribution-specific Anscombe residuals. - - resid_deviance : array - deviance residuals; see family.py for - distribution-specific deviance residuals. - - pearson_chi2 : float - chi-Squared statistic is defined as the sum - of the squares of the Pearson residuals - - normalized_cov_params : array - k*k, approximates [X.T*X]-1 - - Examples - -------- - >>> import libpysal - >>> from spglm.glm import GLM, GLMResults - >>> from spglm.family import Gaussian - >>> db = libpysal.io.open(libpysal.examples.get_path('columbus.dbf'),'r') - >>> y = np.array(db.by_col("HOVAL")) - >>> y = np.reshape(y, (49,1)) - >>> X = [] - >>> X.append(db.by_col("INC")) - >>> X.append(db.by_col("CRIME")) - >>> X = np.array(X).T - >>> model = GLM(y, X, family=Gaussian()) - >>> results1 = model.fit() - >>> results1.aic - 408.73548964604873 - >>> model = results1.model - >>> params = results1.params.flatten() - >>> predy = results1.mu - >>> w = results1.w - >>> results2 = GLMResults(model, params, predy, w) - >>> results2.aic - 408.73548964604873 - - """ - -
[docs] def __init__(self, model, params, mu, w): - self.model = model - self.n = model.n - self.y = model.y.T.flatten() - self.X = model.X - self.k = model.k - self.offset = model.offset - self.family = model.family - self.fit_params = model.fit_params - self.params = params - self.w = w - self.mu = mu.flatten() - self._cache = {}
- - @cache_readonly - def df_model(self): - return self.model.df_model - - @cache_readonly - def df_resid(self): - return self.model.df_resid - - @cache_readonly - def normalized_cov_params(self): - return la.inv(spdot(self.w.T, self.w)) - - @cache_readonly - def resid_response(self): - return (self.y - self.mu) - - @cache_readonly - def resid_pearson(self): - return ((self.y - self.mu) / - np.sqrt(self.family.variance(self.mu))) - - @cache_readonly - def resid_working(self): - return (self.resid_response / self.family.link.deriv(self.mu)) - - @cache_readonly - def resid_anscombe(self): - return (self.family.resid_anscombe(self.y, self.mu)) - - @cache_readonly - def resid_deviance(self): - return (self.family.resid_dev(self.y, self.mu)) - - @cache_readonly - def pearson_chi2(self): - chisq = (self.y - self.mu)**2 / self.family.variance(self.mu) - chisqsum = np.sum(chisq) - return chisqsum - - @cache_readonly - def null(self): - y = np.reshape(self.y, (-1, 1)) - model = self.model - X = np.ones((len(y), 1)) - null_mod = GLM( - y, - X, - family=self.family, - offset=self.offset, - constant=False) - return null_mod.fit().mu - - @cache_readonly - def scale(self): - if isinstance(self.family, (family.Binomial, family.Poisson)): - return 1. - else: - return (((np.power(self.resid_response, 2) / - self.family.variance(self.mu))).sum() / - (self.df_resid)) - - @cache_readonly - def deviance(self): - return self.family.deviance(self.y, self.mu) - - @cache_readonly - def null_deviance(self): - return self.family.deviance(self.y, self.null) - - @cache_readonly - def llnull(self): - return self.family.loglike(self.y, self.null, scale=self.scale) - - @cache_readonly - def llf(self): - return self.family.loglike(self.y, self.mu, scale=self.scale) - - @cache_readonly - def aic(self): - if isinstance(self.family, family.QuasiPoisson): - return np.nan - else: - return -2 * self.llf + 2 * (self.df_model + 1) - - @cache_readonly - def bic(self): - return (self.deviance - - (self.model.n - self.df_model - 1) * - np.log(self.model.n)) - - @cache_readonly - def D2(self): - return 1 - (self.deviance / self.null_deviance) - - @cache_readonly - def adj_D2(self): - return 1.0 - (float(self.n) - 1.0) / \ - (float(self.n) - float(self.k)) * (1.0 - self.D2) - - @cache_readonly - def pseudoR2(self): - return 1 - (self.llf / self.llnull) - - @cache_readonly - def adj_pseudoR2(self): - return 1 - ((self.llf - self.k) / self.llnull) - - @cache_readonly - def tr_S(self): - xtx_inv = np.linalg.inv(np.dot(self.X.T, self.X)) - xtx_inv_xt = np.dot(xtx_inv, self.X.T) - S = np.dot(self.X, xtx_inv_xt) - return np.trace(S)
-
- -
- -
-
- - - \ No newline at end of file diff --git a/docs/_build/html/_sources/api.txt b/docs/_build/html/_sources/api.txt deleted file mode 100644 index a7be72b2..00000000 --- a/docs/_build/html/_sources/api.txt +++ /dev/null @@ -1,18 +0,0 @@ -.. _api_ref: - -.. currentmodule:: spglm - -API reference -============= - -.. _glm_api: - -GLM --------------- - -.. autosummary:: - :toctree: generated/ - - spglm.glm.GLM - spglm.glm.GLMResults - diff --git a/docs/_build/html/_sources/generated/spglm.glm.GLM.txt b/docs/_build/html/_sources/generated/spglm.glm.GLM.txt deleted file mode 100644 index 92f04023..00000000 --- a/docs/_build/html/_sources/generated/spglm.glm.GLM.txt +++ /dev/null @@ -1,32 +0,0 @@ -spglm.glm.GLM -============= - -.. currentmodule:: spglm.glm - -.. autoclass:: GLM - - - .. automethod:: __init__ - - - .. rubric:: Methods - - .. autosummary:: - - ~GLM.__init__ - ~GLM.df_model - ~GLM.df_resid - ~GLM.fit - - - - - - .. rubric:: Attributes - - .. autosummary:: - - ~GLM.mean_y - ~GLM.std_y - - \ No newline at end of file diff --git a/docs/_build/html/_sources/index.txt b/docs/_build/html/_sources/index.txt deleted file mode 100644 index 222a0745..00000000 --- a/docs/_build/html/_sources/index.txt +++ /dev/null @@ -1,16 +0,0 @@ -.. documentation master file - -Sparse generalize linear models (spglm) - - -.. toctree:: - :hidden: - :maxdepth: 3 - :caption: Contents: - - Installation - API - References - - -.. _PySAL: https://github.com/pysal/pysal diff --git a/docs/_build/html/_sources/installation.txt b/docs/_build/html/_sources/installation.txt deleted file mode 100644 index 8eb99bdc..00000000 --- a/docs/_build/html/_sources/installation.txt +++ /dev/null @@ -1,44 +0,0 @@ -.. Installation - -Installation -============ - - -spglm supports python `3.5`_ and `3.6`_ only. Please make sure that you are -operating in a python 3 environment. - -Installing released version ---------------------------- - -spglm is available on the `Python Package Index`_. Therefore, you can either -install directly with `pip` from the command line:: - - pip install -U spglm - - -or download the source distribution (.tar.gz) and decompress it to your selected -destination. Open a command shell and navigate to the decompressed folder. -Type:: - - pip install . - -Installing development version ------------------------------- - -Potentially, you might want to use the newest features in the development -version of spglm on github - `pysal/spglm`_ while have not been incorporated -in the Pypi released version. You can achieve that by installing `pysal/spglm`_ -by running the following from a command shell:: - - pip install https://github.com/pysal/spglm/archive/master.zip - -You can also `fork`_ the `pysal/spglm`_ repo and create a local clone of -your fork. By making changes -to your local clone and submitting a pull request to `pysal/spglm`_, you can -contribute to the mgwr development. - -.. _3.5: https://docs.python.org/3.5/ -.. _3.6: https://docs.python.org/3.6/ -.. _Python Package Index: https://pypi.org/project/spglm/ -.. _pysal/spglm: https://github.com/pysal/spglm -.. _fork: https://help.github.com/articles/fork-a-repo/ diff --git a/docs/_build/html/_sources/references.txt b/docs/_build/html/_sources/references.txt deleted file mode 100644 index 09d2529e..00000000 --- a/docs/_build/html/_sources/references.txt +++ /dev/null @@ -1,7 +0,0 @@ -.. reference for the docs - -References -========== - -.. bibliography:: _static/references.bib - :cited: diff --git a/docs/_build/html/_static/ajax-loader.gif b/docs/_build/html/_static/ajax-loader.gif deleted file mode 100644 index 61faf8ca..00000000 Binary files a/docs/_build/html/_static/ajax-loader.gif and /dev/null differ diff --git a/docs/_build/html/_static/basic.css 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.btn-large { - font-size: 17.5px; -} - -.btn-group > .btn:first-child { - margin-left: 0; - -webkit-border-bottom-left-radius: 4px; - border-bottom-left-radius: 4px; - -webkit-border-top-left-radius: 4px; - border-top-left-radius: 4px; - -moz-border-radius-bottomleft: 4px; - -moz-border-radius-topleft: 4px; -} - -.btn-group > .btn:last-child, -.btn-group > .dropdown-toggle { - -webkit-border-top-right-radius: 4px; - border-top-right-radius: 4px; - -webkit-border-bottom-right-radius: 4px; - border-bottom-right-radius: 4px; - -moz-border-radius-topright: 4px; - -moz-border-radius-bottomright: 4px; -} - -.btn-group > .btn.large:first-child { - margin-left: 0; - -webkit-border-bottom-left-radius: 6px; - border-bottom-left-radius: 6px; - -webkit-border-top-left-radius: 6px; - border-top-left-radius: 6px; - -moz-border-radius-bottomleft: 6px; - -moz-border-radius-topleft: 6px; -} - -.btn-group > .btn.large:last-child, -.btn-group > .large.dropdown-toggle { - -webkit-border-top-right-radius: 6px; - border-top-right-radius: 6px; - -webkit-border-bottom-right-radius: 6px; - border-bottom-right-radius: 6px; - -moz-border-radius-topright: 6px; - -moz-border-radius-bottomright: 6px; -} - -.btn-group > .btn:hover, -.btn-group > .btn:focus, -.btn-group > .btn:active, -.btn-group > .btn.active { - z-index: 2; -} - -.btn-group .dropdown-toggle:active, -.btn-group.open .dropdown-toggle { - outline: 0; -} - -.btn-group > .btn + .dropdown-toggle { - *padding-top: 5px; - padding-right: 8px; - *padding-bottom: 5px; - padding-left: 8px; - -webkit-box-shadow: inset 1px 0 0 rgba(255, 255, 255, 0.125), inset 0 1px 0 rgba(255, 255, 255, 0.2), 0 1px 2px rgba(0, 0, 0, 0.05); - -moz-box-shadow: inset 1px 0 0 rgba(255, 255, 255, 0.125), inset 0 1px 0 rgba(255, 255, 255, 0.2), 0 1px 2px rgba(0, 0, 0, 0.05); - box-shadow: inset 1px 0 0 rgba(255, 255, 255, 0.125), inset 0 1px 0 rgba(255, 255, 255, 0.2), 0 1px 2px rgba(0, 0, 0, 0.05); -} - -.btn-group > .btn-mini + .dropdown-toggle { - *padding-top: 2px; - padding-right: 5px; - *padding-bottom: 2px; - padding-left: 5px; -} - -.btn-group > .btn-small + .dropdown-toggle { - *padding-top: 5px; - *padding-bottom: 4px; -} - -.btn-group > .btn-large + .dropdown-toggle { - *padding-top: 7px; - padding-right: 12px; - *padding-bottom: 7px; - padding-left: 12px; -} - -.btn-group.open .dropdown-toggle { - background-image: none; - -webkit-box-shadow: inset 0 2px 4px rgba(0, 0, 0, 0.15), 0 1px 2px rgba(0, 0, 0, 0.05); - -moz-box-shadow: inset 0 2px 4px rgba(0, 0, 0, 0.15), 0 1px 2px rgba(0, 0, 0, 0.05); - box-shadow: inset 0 2px 4px rgba(0, 0, 0, 0.15), 0 1px 2px rgba(0, 0, 0, 0.05); -} - -.btn-group.open .btn.dropdown-toggle { - background-color: #e6e6e6; -} - -.btn-group.open .btn-primary.dropdown-toggle { - background-color: #0044cc; -} - -.btn-group.open .btn-warning.dropdown-toggle { - background-color: #f89406; -} - -.btn-group.open .btn-danger.dropdown-toggle { - background-color: #bd362f; -} - -.btn-group.open .btn-success.dropdown-toggle { - background-color: #51a351; -} - -.btn-group.open .btn-info.dropdown-toggle { - background-color: #2f96b4; -} - -.btn-group.open .btn-inverse.dropdown-toggle { - background-color: #222222; -} - -.btn .caret { - margin-top: 8px; - margin-left: 0; -} - -.btn-large .caret { - margin-top: 6px; -} - -.btn-large .caret { - border-top-width: 5px; - border-right-width: 5px; - border-left-width: 5px; -} - -.btn-mini .caret, -.btn-small .caret { - margin-top: 8px; -} - -.dropup .btn-large .caret { - border-bottom-width: 5px; -} - -.btn-primary .caret, -.btn-warning .caret, -.btn-danger .caret, -.btn-info .caret, -.btn-success .caret, -.btn-inverse .caret { - border-top-color: #ffffff; - border-bottom-color: #ffffff; -} - -.btn-group-vertical { - display: inline-block; - *display: inline; - /* IE7 inline-block hack */ - - *zoom: 1; -} - -.btn-group-vertical > .btn { - display: block; - float: none; - max-width: 100%; - -webkit-border-radius: 0; - -moz-border-radius: 0; - border-radius: 0; -} - -.btn-group-vertical > .btn + .btn { - margin-top: -1px; - margin-left: 0; -} - -.btn-group-vertical > .btn:first-child { - -webkit-border-radius: 4px 4px 0 0; - -moz-border-radius: 4px 4px 0 0; - border-radius: 4px 4px 0 0; -} - -.btn-group-vertical > .btn:last-child { - -webkit-border-radius: 0 0 4px 4px; - -moz-border-radius: 0 0 4px 4px; - border-radius: 0 0 4px 4px; -} - -.btn-group-vertical > .btn-large:first-child { - -webkit-border-radius: 6px 6px 0 0; - -moz-border-radius: 6px 6px 0 0; - border-radius: 6px 6px 0 0; -} - -.btn-group-vertical > .btn-large:last-child { - -webkit-border-radius: 0 0 6px 6px; - -moz-border-radius: 0 0 6px 6px; - border-radius: 0 0 6px 6px; -} - -.alert { - padding: 8px 35px 8px 14px; - margin-bottom: 20px; - text-shadow: 0 1px 0 rgba(255, 255, 255, 0.5); - background-color: #fcf8e3; - border: 1px solid #fbeed5; - -webkit-border-radius: 4px; - -moz-border-radius: 4px; - border-radius: 4px; -} - -.alert, -.alert h4 { - color: #c09853; -} - -.alert h4 { - margin: 0; -} - -.alert .close { - position: relative; - top: -2px; - right: -21px; - line-height: 20px; -} - -.alert-success { - color: #468847; - background-color: #dff0d8; - border-color: #d6e9c6; -} - -.alert-success h4 { - color: #468847; -} - -.alert-danger, -.alert-error { - color: #b94a48; - background-color: #f2dede; - border-color: #eed3d7; -} - -.alert-danger h4, -.alert-error h4 { - color: #b94a48; -} - -.alert-info { - color: #3a87ad; - background-color: #d9edf7; - border-color: #bce8f1; -} - -.alert-info h4 { - color: #3a87ad; -} - -.alert-block { - padding-top: 14px; - padding-bottom: 14px; -} - -.alert-block > p, -.alert-block > ul { - margin-bottom: 0; -} - -.alert-block p + p { - margin-top: 5px; -} - -.nav { - margin-bottom: 20px; - margin-left: 0; - list-style: none; -} - -.nav > li > a { - display: block; -} - -.nav > li > a:hover, -.nav > li > a:focus { - text-decoration: none; - background-color: #eeeeee; -} - -.nav > li > a > img { - max-width: none; -} - -.nav > .pull-right { - float: right; -} - -.nav-header { - display: block; - padding: 3px 15px; - font-size: 11px; - font-weight: bold; - line-height: 20px; - color: #999999; - text-shadow: 0 1px 0 rgba(255, 255, 255, 0.5); - text-transform: uppercase; -} - -.nav li + .nav-header { - margin-top: 9px; -} - -.nav-list { - padding-right: 15px; - padding-left: 15px; - margin-bottom: 0; -} - -.nav-list > li > a, -.nav-list .nav-header { - margin-right: -15px; - margin-left: -15px; - text-shadow: 0 1px 0 rgba(255, 255, 255, 0.5); -} - -.nav-list > li > a { - padding: 3px 15px; -} - -.nav-list > .active > a, -.nav-list > .active > a:hover, -.nav-list > .active > a:focus { - color: #ffffff; - text-shadow: 0 -1px 0 rgba(0, 0, 0, 0.2); - background-color: #0088cc; -} - -.nav-list [class^="icon-"], -.nav-list [class*=" icon-"] { - margin-right: 2px; -} - -.nav-list .divider { - *width: 100%; - height: 1px; - margin: 9px 1px; - *margin: -5px 0 5px; - overflow: hidden; - background-color: #e5e5e5; - border-bottom: 1px solid #ffffff; -} - -.nav-tabs, -.nav-pills { - *zoom: 1; -} - -.nav-tabs:before, -.nav-pills:before, -.nav-tabs:after, -.nav-pills:after { - display: table; - line-height: 0; - content: ""; -} - -.nav-tabs:after, -.nav-pills:after { - clear: both; -} - -.nav-tabs > li, -.nav-pills > li { - float: left; -} - -.nav-tabs > li > a, -.nav-pills > li > a { - padding-right: 12px; - padding-left: 12px; - margin-right: 2px; - line-height: 14px; -} - -.nav-tabs { - border-bottom: 1px solid #ddd; -} - -.nav-tabs > li { - margin-bottom: -1px; -} - -.nav-tabs > li > a { - padding-top: 8px; - padding-bottom: 8px; - line-height: 20px; - border: 1px solid transparent; - -webkit-border-radius: 4px 4px 0 0; - -moz-border-radius: 4px 4px 0 0; - border-radius: 4px 4px 0 0; -} - -.nav-tabs > li > a:hover, -.nav-tabs > li > a:focus { - border-color: #eeeeee #eeeeee #dddddd; -} - -.nav-tabs > .active > a, -.nav-tabs > .active > a:hover, 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4px; - -moz-border-radius-topleft: 4px; -} - -.nav-tabs.nav-stacked > li:last-child > a { - -webkit-border-bottom-right-radius: 4px; - border-bottom-right-radius: 4px; - -webkit-border-bottom-left-radius: 4px; - border-bottom-left-radius: 4px; - -moz-border-radius-bottomright: 4px; - -moz-border-radius-bottomleft: 4px; -} - -.nav-tabs.nav-stacked > li > a:hover, -.nav-tabs.nav-stacked > li > a:focus { - z-index: 2; - border-color: #ddd; -} - -.nav-pills.nav-stacked > li > a { - margin-bottom: 3px; -} - -.nav-pills.nav-stacked > li:last-child > a { - margin-bottom: 1px; -} - -.nav-tabs .dropdown-menu { - -webkit-border-radius: 0 0 6px 6px; - -moz-border-radius: 0 0 6px 6px; - border-radius: 0 0 6px 6px; -} - -.nav-pills .dropdown-menu { - -webkit-border-radius: 6px; - -moz-border-radius: 6px; - border-radius: 6px; -} - -.nav .dropdown-toggle .caret { - margin-top: 6px; - border-top-color: #0088cc; - border-bottom-color: #0088cc; -} - -.nav .dropdown-toggle:hover .caret, -.nav .dropdown-toggle:focus .caret { - border-top-color: #005580; - border-bottom-color: #005580; -} - -/* move down carets for tabs */ - -.nav-tabs .dropdown-toggle .caret { - margin-top: 8px; -} - -.nav .active .dropdown-toggle .caret { - border-top-color: #fff; - border-bottom-color: #fff; -} - -.nav-tabs .active .dropdown-toggle .caret { - border-top-color: #555555; - border-bottom-color: #555555; -} - -.nav > .dropdown.active > a:hover, -.nav > .dropdown.active > a:focus { - cursor: pointer; -} - -.nav-tabs .open .dropdown-toggle, -.nav-pills .open .dropdown-toggle, -.nav > li.dropdown.open.active > a:hover, -.nav > li.dropdown.open.active > a:focus { - color: #ffffff; - background-color: #999999; - border-color: #999999; -} - -.nav li.dropdown.open .caret, -.nav li.dropdown.open.active .caret, -.nav li.dropdown.open a:hover .caret, -.nav li.dropdown.open a:focus .caret { - border-top-color: #ffffff; - border-bottom-color: #ffffff; - opacity: 1; - filter: alpha(opacity=100); -} - 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a9969993..00000000 Binary files a/docs/_build/html/_static/bootstrap-2.3.2/img/glyphicons-halflings.png and /dev/null differ diff --git a/docs/_build/html/_static/bootstrap-2.3.2/js/bootstrap.js b/docs/_build/html/_static/bootstrap-2.3.2/js/bootstrap.js deleted file mode 100644 index 638bb187..00000000 --- a/docs/_build/html/_static/bootstrap-2.3.2/js/bootstrap.js +++ /dev/null @@ -1,2287 +0,0 @@ -/* =================================================== - * bootstrap-transition.js v2.3.2 - * http://twitter.github.com/bootstrap/javascript.html#transitions - * =================================================== - * Copyright 2012 Twitter, Inc. - * - * Licensed under the Apache License, Version 2.0 (the "License"); - * you may not use this file except in compliance with the License. - * You may obtain a copy of the License at - * - * http://www.apache.org/licenses/LICENSE-2.0 - * - * Unless required by applicable law or agreed to in writing, software - * distributed under the License is distributed on an "AS IS" BASIS, - * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. - * See the License for the specific language governing permissions and - * limitations under the License. - * ========================================================== */ - - -!function ($) { - - "use strict"; // jshint ;_; - - - /* CSS TRANSITION SUPPORT (http://www.modernizr.com/) - * ======================================================= */ - - $(function () { - - $.support.transition = (function () { - - var transitionEnd = (function () { - - var el = document.createElement('bootstrap') - , transEndEventNames = { - 'WebkitTransition' : 'webkitTransitionEnd' - , 'MozTransition' : 'transitionend' - , 'OTransition' : 'oTransitionEnd otransitionend' - , 'transition' : 'transitionend' - } - , name - - for (name in transEndEventNames){ - if (el.style[name] !== undefined) { - return transEndEventNames[name] - } - } - - }()) - - return transitionEnd && { - end: transitionEnd - } - - })() - - }) - -}(window.$jqTheme || window.jQuery); -/* ========================================================== - * bootstrap-alert.js v2.3.2 - * http://twitter.github.com/bootstrap/javascript.html#alerts - * ========================================================== - * Copyright 2012 Twitter, Inc. - * - * Licensed under the Apache License, Version 2.0 (the "License"); - * you may not use this file except in compliance with the License. - * You may obtain a copy of the License at - * - * http://www.apache.org/licenses/LICENSE-2.0 - * - * Unless required by applicable law or agreed to in writing, software - * distributed under the License is distributed on an "AS IS" BASIS, - * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. - * See the License for the specific language governing permissions and - * limitations under the License. - * ========================================================== */ - - -!function ($) { - - "use strict"; // jshint ;_; - - - /* ALERT CLASS DEFINITION - * ====================== */ - - var dismiss = '[data-dismiss="alert"]' - , Alert = function (el) { - $(el).on('click', dismiss, this.close) - } - - Alert.prototype.close = function (e) { - var $this = $(this) - , selector = $this.attr('data-target') - , $parent - - if (!selector) { - selector = $this.attr('href') - selector = selector && selector.replace(/.*(?=#[^\s]*$)/, '') //strip for ie7 - } - - $parent = $(selector) - - e && e.preventDefault() - - $parent.length || ($parent = $this.hasClass('alert') ? $this : $this.parent()) - - $parent.trigger(e = $.Event('close')) - - if (e.isDefaultPrevented()) return - - $parent.removeClass('in') - - function removeElement() { - $parent - .trigger('closed') - .remove() - } - - $.support.transition && $parent.hasClass('fade') ? - $parent.on($.support.transition.end, removeElement) : - removeElement() - } - - - /* ALERT PLUGIN DEFINITION - * ======================= */ - - var old = $.fn.alert - - $.fn.alert = function (option) { - return this.each(function () { - var $this = $(this) - , data = $this.data('alert') - if (!data) $this.data('alert', (data = new Alert(this))) - if (typeof option == 'string') data[option].call($this) - }) - } - - $.fn.alert.Constructor = Alert - - - /* ALERT NO CONFLICT - * ================= */ - - $.fn.alert.noConflict = function () { - $.fn.alert = old - return this - } - - - /* ALERT DATA-API - * ============== */ - - $(document).on('click.alert.data-api', dismiss, Alert.prototype.close) - -}(window.$jqTheme || window.jQuery); -/* ============================================================ - * bootstrap-button.js v2.3.2 - * http://twitter.github.com/bootstrap/javascript.html#buttons - * ============================================================ - * Copyright 2012 Twitter, Inc. - * - * Licensed under the Apache License, Version 2.0 (the "License"); - * you may not use this file except in compliance with the License. - * You may obtain a copy of the License at - * - * http://www.apache.org/licenses/LICENSE-2.0 - * - * Unless required by applicable law or agreed to in writing, software - * distributed under the License is distributed on an "AS IS" BASIS, - * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. - * See the License for the specific language governing permissions and - * limitations under the License. - * ============================================================ */ - - -!function ($) { - - "use strict"; // jshint ;_; - - - /* BUTTON PUBLIC CLASS DEFINITION - * ============================== */ - - var Button = function (element, options) { - this.$element = $(element) - this.options = $.extend({}, $.fn.button.defaults, options) - } - - Button.prototype.setState = function (state) { - var d = 'disabled' - , $el = this.$element - , data = $el.data() - , val = $el.is('input') ? 'val' : 'html' - - state = state + 'Text' - data.resetText || $el.data('resetText', $el[val]()) - - $el[val](data[state] || this.options[state]) - - // push to event loop to allow forms to submit - setTimeout(function () { - state == 'loadingText' ? - $el.addClass(d).attr(d, d) : - $el.removeClass(d).removeAttr(d) - }, 0) - } - - Button.prototype.toggle = function () { - var $parent = this.$element.closest('[data-toggle="buttons-radio"]') - - $parent && $parent - .find('.active') - .removeClass('active') - - this.$element.toggleClass('active') - } - - - /* BUTTON PLUGIN DEFINITION - * ======================== */ - - var old = $.fn.button - - $.fn.button = function (option) { - return this.each(function () { - var $this = $(this) - , data = $this.data('button') - , options = typeof option == 'object' && option - if (!data) $this.data('button', (data = new Button(this, options))) - if (option == 'toggle') data.toggle() - else if (option) data.setState(option) - }) - } - - $.fn.button.defaults = { - loadingText: 'loading...' - } - - $.fn.button.Constructor = Button - - - /* BUTTON NO CONFLICT - * ================== */ - - $.fn.button.noConflict = function () { - $.fn.button = old - return this - } - - - /* BUTTON DATA-API - * =============== */ - - $(document).on('click.button.data-api', '[data-toggle^=button]', function (e) { - var $btn = $(e.target) - if (!$btn.hasClass('btn')) $btn = $btn.closest('.btn') - $btn.button('toggle') - }) - -}(window.$jqTheme || window.jQuery); -/* ========================================================== - * bootstrap-carousel.js v2.3.2 - * http://twitter.github.com/bootstrap/javascript.html#carousel - * ========================================================== - * Copyright 2012 Twitter, Inc. - * - * Licensed under the Apache License, Version 2.0 (the "License"); - * you may not use this file except in compliance with the License. - * You may obtain a copy of the License at - * - * http://www.apache.org/licenses/LICENSE-2.0 - * - * Unless required by applicable law or agreed to in writing, software - * distributed under the License is distributed on an "AS IS" BASIS, - * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. - * See the License for the specific language governing permissions and - * limitations under the License. - * ========================================================== */ - - -!function ($) { - - "use strict"; // jshint ;_; - - - /* CAROUSEL CLASS DEFINITION - * ========================= */ - - var Carousel = function (element, options) { - this.$element = $(element) - this.$indicators = this.$element.find('.carousel-indicators') - this.options = options - this.options.pause == 'hover' && this.$element - .on('mouseenter', $.proxy(this.pause, this)) - .on('mouseleave', $.proxy(this.cycle, this)) - } - - Carousel.prototype = { - - cycle: function (e) { - if (!e) this.paused = false - if (this.interval) clearInterval(this.interval); - this.options.interval - && !this.paused - && (this.interval = setInterval($.proxy(this.next, this), this.options.interval)) - return this - } - - , getActiveIndex: function () { - this.$active = this.$element.find('.item.active') - this.$items = this.$active.parent().children() - return this.$items.index(this.$active) - } - - , to: function (pos) { - var activeIndex = this.getActiveIndex() - , that = this - - if (pos > (this.$items.length - 1) || pos < 0) return - - if (this.sliding) { - return this.$element.one('slid', function () { - that.to(pos) - }) - } - - if (activeIndex == pos) { - return this.pause().cycle() - } - - return this.slide(pos > activeIndex ? 'next' : 'prev', $(this.$items[pos])) - } - - , pause: function (e) { - if (!e) this.paused = true - if (this.$element.find('.next, .prev').length && $.support.transition.end) { - this.$element.trigger($.support.transition.end) - this.cycle(true) - } - clearInterval(this.interval) - this.interval = null - return this - } - - , next: function () { - if (this.sliding) return - return this.slide('next') - } - - , prev: function () { - if (this.sliding) return - return this.slide('prev') - } - - , slide: function (type, next) { - var $active = this.$element.find('.item.active') - , $next = next || $active[type]() - , isCycling = this.interval - , direction = type == 'next' ? 'left' : 'right' - , fallback = type == 'next' ? 'first' : 'last' - , that = this - , e - - this.sliding = true - - isCycling && this.pause() - - $next = $next.length ? $next : this.$element.find('.item')[fallback]() - - e = $.Event('slide', { - relatedTarget: $next[0] - , direction: direction - }) - - if ($next.hasClass('active')) return - - if (this.$indicators.length) { - this.$indicators.find('.active').removeClass('active') - this.$element.one('slid', function () { - var $nextIndicator = $(that.$indicators.children()[that.getActiveIndex()]) - $nextIndicator && $nextIndicator.addClass('active') - }) - } - - if ($.support.transition && this.$element.hasClass('slide')) { - this.$element.trigger(e) - if (e.isDefaultPrevented()) return - $next.addClass(type) - $next[0].offsetWidth // force reflow - $active.addClass(direction) - $next.addClass(direction) - this.$element.one($.support.transition.end, function () { - $next.removeClass([type, direction].join(' ')).addClass('active') - $active.removeClass(['active', direction].join(' ')) - that.sliding = false - setTimeout(function () { that.$element.trigger('slid') }, 0) - }) - } else { - this.$element.trigger(e) - if (e.isDefaultPrevented()) return - $active.removeClass('active') - $next.addClass('active') - this.sliding = false - this.$element.trigger('slid') - } - - isCycling && this.cycle() - - return this - } - - } - - - /* CAROUSEL PLUGIN DEFINITION - * ========================== */ - - var old = $.fn.carousel - - $.fn.carousel = function (option) { - return this.each(function () { - var $this = $(this) - , data = $this.data('carousel') - , options = $.extend({}, $.fn.carousel.defaults, typeof option == 'object' && option) - , action = typeof option == 'string' ? option : options.slide - if (!data) $this.data('carousel', (data = new Carousel(this, options))) - if (typeof option == 'number') data.to(option) - else if (action) data[action]() - else if (options.interval) data.pause().cycle() - }) - } - - $.fn.carousel.defaults = { - interval: 5000 - , pause: 'hover' - } - - $.fn.carousel.Constructor = Carousel - - - /* CAROUSEL NO CONFLICT - * ==================== */ - - $.fn.carousel.noConflict = function () { - $.fn.carousel = old - return this - } - - /* CAROUSEL DATA-API - * ================= */ - - $(document).on('click.carousel.data-api', '[data-slide], [data-slide-to]', function (e) { - var $this = $(this), href - , $target = $($this.attr('data-target') || (href = $this.attr('href')) && href.replace(/.*(?=#[^\s]+$)/, '')) //strip for ie7 - , options = $.extend({}, $target.data(), $this.data()) - , slideIndex - - $target.carousel(options) - - if (slideIndex = $this.attr('data-slide-to')) { - $target.data('carousel').pause().to(slideIndex).cycle() - } - - e.preventDefault() - }) - -}(window.$jqTheme || window.jQuery); -/* ============================================================= - * bootstrap-collapse.js v2.3.2 - * http://twitter.github.com/bootstrap/javascript.html#collapse - * ============================================================= - * Copyright 2012 Twitter, Inc. - * - * Licensed under the Apache License, Version 2.0 (the "License"); - * you may not use this file except in compliance with the License. - * You may obtain a copy of the License at - * - * http://www.apache.org/licenses/LICENSE-2.0 - * - * Unless required by applicable law or agreed to in writing, software - * distributed under the License is distributed on an "AS IS" BASIS, - * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. - * See the License for the specific language governing permissions and - * limitations under the License. - * ============================================================ */ - - -!function ($) { - - "use strict"; // jshint ;_; - - - /* COLLAPSE PUBLIC CLASS DEFINITION - * ================================ */ - - var Collapse = function (element, options) { - this.$element = $(element) - this.options = $.extend({}, $.fn.collapse.defaults, options) - - if (this.options.parent) { - this.$parent = $(this.options.parent) - } - - this.options.toggle && this.toggle() - } - - Collapse.prototype = { - - constructor: Collapse - - , dimension: function () { - var hasWidth = this.$element.hasClass('width') - return hasWidth ? 'width' : 'height' - } - - , show: function () { - var dimension - , scroll - , actives - , hasData - - if (this.transitioning || this.$element.hasClass('in')) return - - dimension = this.dimension() - scroll = $.camelCase(['scroll', dimension].join('-')) - actives = this.$parent && this.$parent.find('> .accordion-group > .in') - - if (actives && actives.length) { - hasData = actives.data('collapse') - if (hasData && hasData.transitioning) return - actives.collapse('hide') - hasData || actives.data('collapse', null) - } - - this.$element[dimension](0) - this.transition('addClass', $.Event('show'), 'shown') - $.support.transition && this.$element[dimension](this.$element[0][scroll]) - } - - , hide: function () { - var dimension - if (this.transitioning || !this.$element.hasClass('in')) return - dimension = this.dimension() - this.reset(this.$element[dimension]()) - this.transition('removeClass', $.Event('hide'), 'hidden') - this.$element[dimension](0) - } - - , reset: function (size) { - var dimension = this.dimension() - - this.$element - .removeClass('collapse') - [dimension](size || 'auto') - [0].offsetWidth - - this.$element[size !== null ? 'addClass' : 'removeClass']('collapse') - - return this - } - - , transition: function (method, startEvent, completeEvent) { - var that = this - , complete = function () { - if (startEvent.type == 'show') that.reset() - that.transitioning = 0 - that.$element.trigger(completeEvent) - } - - this.$element.trigger(startEvent) - - if (startEvent.isDefaultPrevented()) return - - this.transitioning = 1 - - this.$element[method]('in') - - $.support.transition && this.$element.hasClass('collapse') ? - this.$element.one($.support.transition.end, complete) : - complete() - } - - , toggle: function () { - this[this.$element.hasClass('in') ? 'hide' : 'show']() - } - - } - - - /* COLLAPSE PLUGIN DEFINITION - * ========================== */ - - var old = $.fn.collapse - - $.fn.collapse = function (option) { - return this.each(function () { - var $this = $(this) - , data = $this.data('collapse') - , options = $.extend({}, $.fn.collapse.defaults, $this.data(), typeof option == 'object' && option) - if (!data) $this.data('collapse', (data = new Collapse(this, options))) - if (typeof option == 'string') data[option]() - }) - } - - $.fn.collapse.defaults = { - toggle: true - } - - $.fn.collapse.Constructor = Collapse - - - /* COLLAPSE NO CONFLICT - * ==================== */ - - $.fn.collapse.noConflict = function () { - $.fn.collapse = old - return this - } - - - /* COLLAPSE DATA-API - * ================= */ - - $(document).on('click.collapse.data-api', '[data-toggle=collapse]', function (e) { - var $this = $(this), href - , target = $this.attr('data-target') - || e.preventDefault() - || (href = $this.attr('href')) && href.replace(/.*(?=#[^\s]+$)/, '') //strip for ie7 - , option = $(target).data('collapse') ? 'toggle' : $this.data() - $this[$(target).hasClass('in') ? 'addClass' : 'removeClass']('collapsed') - $(target).collapse(option) - }) - -}(window.$jqTheme || window.jQuery); -/* ============================================================ - * bootstrap-dropdown.js v2.3.2 - * http://twitter.github.com/bootstrap/javascript.html#dropdowns - * ============================================================ - * Copyright 2012 Twitter, Inc. - * - * Licensed under the Apache License, Version 2.0 (the "License"); - * you may not use this file except in compliance with the License. - * You may obtain a copy of the License at - * - * http://www.apache.org/licenses/LICENSE-2.0 - * - * Unless required by applicable law or agreed to in writing, software - * distributed under the License is distributed on an "AS IS" BASIS, - * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. - * See the License for the specific language governing permissions and - * limitations under the License. - * ============================================================ */ - - -!function ($) { - - "use strict"; // jshint ;_; - - - /* DROPDOWN CLASS DEFINITION - * ========================= */ - - var toggle = '[data-toggle=dropdown]' - , Dropdown = function (element) { - var $el = $(element).on('click.dropdown.data-api', this.toggle) - $('html').on('click.dropdown.data-api', function () { - $el.parent().removeClass('open') - }) - } - - Dropdown.prototype = { - - constructor: Dropdown - - , toggle: function (e) { - var $this = $(this) - , $parent - , isActive - - if ($this.is('.disabled, :disabled')) return - - $parent = getParent($this) - - isActive = $parent.hasClass('open') - - clearMenus() - - if (!isActive) { - if ('ontouchstart' in document.documentElement) { - // if mobile we we use a backdrop because click events don't delegate - $('