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datacite.yml
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# Metadata for DOI registration according to DataCite Metadata Schema 4.1.
# For detailed schema description see https://doi.org/10.5438/0014
authors:
- firstname: Michael
lastname: Hanke
id: "ORCID:0000-0001-6398-6370"
- firstname: Adina
lastname: Wagner
id: "ORCID:0000-0003-2917-3450"
- firstname: Falko
lastname: Kaule
- firstname: Laura
lastname: Waite
id: "ORCID:0000-0003-2213-7465"
- firstname: Christian
lastname: Mönch
id: "ORCID:0000-0002-3092-0612"
title: Template images and image space transformations
description: |
"This repository contains data derived from the raw data releases of
the studyforrest.org project. In particular these are:
- participant/scan-specific template images
- transformation between these respective image spaces
For more information about the project visit: http://studyforrest.org
File name conventions:
Each directory in the subject directories and the "templates" directory
corresponds to one image template. Templates in sub* directories are
participant-specific (not aligned across participants). However, templates
with the same name have corresponding input data. Templates in the templates
directory have been derived from all participants, and there are typically
transformation from participant specific templates into the group template
space provided. Group template images carry a grp prefix in their label.
All transformations are the output if FSL tools: either MAT files with
4x4 affine transformation matrices from FLIRT, or FNIRT warp files.
Here is an example of how transformations can be located. The transformation
of the template image created from all 3T BOLD images of participant 01
acquired in phase 2 of the project into the group template space for 3T BOLD
scans can be found in:
sub-01/bold3Tp2/in_grpbold3Tp2/subj2tmpl_warp.nii.gz
Each template directory contains one or more image files with more-or-less
self-explanatory names, such as "head", "brain", or "brain_mask". File with
such a name in the one of the in_* folders represent the image in the parent
folder, aligned and resliced to the target space for this transformation.
These images can be used to inspect the quality of the transformation.
Lastly, the code/ directory contains the source code for computing template
images and transformation between them."
keywords:
- Neuroscience
- Studyforrest
license:
name: "Open Data Commons Public Domain Dedication and License (PDDL)"
url: "https://opendatacommons.org/licenses/pddl/"
# Resource type. Default is Dataset, other possible values are Software, Image, Text.
resourcetype: Dataset
# Do not edit or remove the following line
templateversion: 1.2