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PixTestPhOptimization_8cc_source.html
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<div class="fragment"><div class="line"><a name="l00001"></a><span class="lineno"> 1</span> <span class="preprocessor">#include <stdlib.h></span> <span class="comment">// atof, atoi</span></div>
<div class="line"><a name="l00002"></a><span class="lineno"> 2</span> <span class="preprocessor">#include <algorithm></span> <span class="comment">// std::find</span></div>
<div class="line"><a name="l00003"></a><span class="lineno"> 3</span> <span class="preprocessor">#include <sstream></span> <span class="comment">// parsing</span></div>
<div class="line"><a name="l00004"></a><span class="lineno"> 4</span> </div>
<div class="line"><a name="l00005"></a><span class="lineno"> 5</span> <span class="preprocessor">#include <TStopwatch.h></span></div>
<div class="line"><a name="l00006"></a><span class="lineno"> 6</span> </div>
<div class="line"><a name="l00007"></a><span class="lineno"> 7</span> <span class="preprocessor">#include "PixTestPhOptimization.hh"</span></div>
<div class="line"><a name="l00008"></a><span class="lineno"> 8</span> <span class="preprocessor">#include "log.h"</span></div>
<div class="line"><a name="l00009"></a><span class="lineno"> 9</span> </div>
<div class="line"><a name="l00010"></a><span class="lineno"> 10</span> <span class="keyword">using namespace </span>std;</div>
<div class="line"><a name="l00011"></a><span class="lineno"> 11</span> <span class="keyword">using namespace </span>pxar;</div>
<div class="line"><a name="l00012"></a><span class="lineno"> 12</span> </div>
<div class="line"><a name="l00013"></a><span class="lineno"> 13</span> ClassImp(<a class="code" href="classPixTestPhOptimization.html">PixTestPhOptimization</a>)</div>
<div class="line"><a name="l00014"></a><span class="lineno"> 14</span> </div>
<div class="line"><a name="l00015"></a><span class="lineno"> 15</span> <a class="code" href="classPixTestPhOptimization.html">PixTestPhOptimization</a>::<a class="code" href="classPixTestPhOptimization.html">PixTestPhOptimization</a>() {}</div>
<div class="line"><a name="l00016"></a><span class="lineno"> 16</span> </div>
<div class="line"><a name="l00017"></a><span class="lineno"> 17</span> PixTestPhOptimization::PixTestPhOptimization( <a class="code" href="classPixSetup.html">PixSetup</a> *a, std::string name ) : <a class="code" href="classPixTest.html">PixTest</a>(a, name), fParNtrig(-1), fParDAC(<span class="stringliteral">"nada"</span>), fParDacVal(100), fFlagSinglePix(true), fSafetyMarginUp(10), fSafetyMarginLow(15) {</div>
<div class="line"><a name="l00018"></a><span class="lineno"> 18</span>  <a class="code" href="classPixTest.html#a58ed254809211288ac2b0082be4dec73">PixTest::init</a>();</div>
<div class="line"><a name="l00019"></a><span class="lineno"> 19</span>  init();</div>
<div class="line"><a name="l00020"></a><span class="lineno"> 20</span> }</div>
<div class="line"><a name="l00021"></a><span class="lineno"> 21</span> </div>
<div class="line"><a name="l00022"></a><span class="lineno"><a class="line" href="classPixTestPhOptimization.html#acaf46c0ac9f24c781cd18fabacae24a6"> 22</a></span> <span class="keywordtype">bool</span> <a class="code" href="classPixTestPhOptimization.html#acaf46c0ac9f24c781cd18fabacae24a6">PixTestPhOptimization::setParameter</a>(<span class="keywordtype">string</span> parName, <span class="keywordtype">string</span> sval) {</div>
<div class="line"><a name="l00023"></a><span class="lineno"> 23</span>  <span class="keywordtype">bool</span> found(<span class="keyword">false</span>);</div>
<div class="line"><a name="l00024"></a><span class="lineno"> 24</span>  <span class="keywordtype">string</span> str1, str2;</div>
<div class="line"><a name="l00025"></a><span class="lineno"> 25</span>  string::size_type s1;</div>
<div class="line"><a name="l00026"></a><span class="lineno"> 26</span>  <span class="keywordtype">int</span> pixc, pixr;</div>
<div class="line"><a name="l00027"></a><span class="lineno"> 27</span>  std::transform(parName.begin(), parName.end(), parName.begin(), ::tolower);</div>
<div class="line"><a name="l00028"></a><span class="lineno"> 28</span>  <span class="keywordflow">for</span> (<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> i = 0; i < <a class="code" href="classPixTest.html#ac95757b60ed532065ed69ef75340c19f">fParameters</a>.size(); ++i) {</div>
<div class="line"><a name="l00029"></a><span class="lineno"> 29</span>  <span class="keywordflow">if</span> (!<a class="code" href="classPixTest.html#ac95757b60ed532065ed69ef75340c19f">fParameters</a>[i].first.compare(parName)) {</div>
<div class="line"><a name="l00030"></a><span class="lineno"> 30</span>  found = <span class="keyword">true</span>;</div>
<div class="line"><a name="l00031"></a><span class="lineno"> 31</span>  sval.erase(<span class="keyword">remove</span>(sval.begin(), sval.end(), <span class="charliteral">' '</span>), sval.end());</div>
<div class="line"><a name="l00032"></a><span class="lineno"> 32</span>  <span class="keywordflow">if</span> (!parName.compare(<span class="stringliteral">"ntrig"</span>)) {</div>
<div class="line"><a name="l00033"></a><span class="lineno"> 33</span>  <a class="code" href="classPixTest.html#a4a5dfd992b810af6167f889302705d8b">setTestParameter</a>(<span class="stringliteral">"ntrig"</span>, sval); </div>
<div class="line"><a name="l00034"></a><span class="lineno"> 34</span>  fParNtrig = atoi( sval.c_str() );</div>
<div class="line"><a name="l00035"></a><span class="lineno"> 35</span>  LOG(logDEBUG) << <span class="stringliteral">" setting fParNtrig ->"</span> << fParNtrig</div>
<div class="line"><a name="l00036"></a><span class="lineno"> 36</span>  << <span class="stringliteral">"<- from sval = "</span> << sval;</div>
<div class="line"><a name="l00037"></a><span class="lineno"> 37</span>  }</div>
<div class="line"><a name="l00038"></a><span class="lineno"> 38</span>  <span class="keywordflow">if</span> (!parName.compare(<span class="stringliteral">"safetymarginup"</span>)) {</div>
<div class="line"><a name="l00039"></a><span class="lineno"> 39</span>  fSafetyMarginUp = atoi( sval.c_str() );</div>
<div class="line"><a name="l00040"></a><span class="lineno"> 40</span>  LOG(logDEBUG) << <span class="stringliteral">" setting fSafetyMarginUp ->"</span> << fSafetyMarginUp</div>
<div class="line"><a name="l00041"></a><span class="lineno"> 41</span>  << <span class="stringliteral">"<- from sval = "</span> << sval;</div>
<div class="line"><a name="l00042"></a><span class="lineno"> 42</span>  }</div>
<div class="line"><a name="l00043"></a><span class="lineno"> 43</span>  <span class="keywordflow">if</span> (!parName.compare(<span class="stringliteral">"safetymarginlow"</span>)) {</div>
<div class="line"><a name="l00044"></a><span class="lineno"> 44</span>  fSafetyMarginLow = atoi( sval.c_str() );</div>
<div class="line"><a name="l00045"></a><span class="lineno"> 45</span>  LOG(logDEBUG) << <span class="stringliteral">" setting fSafetyMarginLow ->"</span> << fSafetyMarginLow</div>
<div class="line"><a name="l00046"></a><span class="lineno"> 46</span>  << <span class="stringliteral">"<- from sval = "</span> << sval;</div>
<div class="line"><a name="l00047"></a><span class="lineno"> 47</span>  }</div>
<div class="line"><a name="l00048"></a><span class="lineno"> 48</span>  <span class="keywordflow">if</span> (!parName.compare(<span class="stringliteral">"singlepix"</span>)) {</div>
<div class="line"><a name="l00049"></a><span class="lineno"> 49</span>  fFlagSinglePix = atoi( sval.c_str() );</div>
<div class="line"><a name="l00050"></a><span class="lineno"> 50</span>  LOG(logDEBUG) << <span class="stringliteral">" setting fFlagSinglePix ->"</span> << fFlagSinglePix</div>
<div class="line"><a name="l00051"></a><span class="lineno"> 51</span>  << <span class="stringliteral">"<- from sval = "</span> << sval;</div>
<div class="line"><a name="l00052"></a><span class="lineno"> 52</span>  }</div>
<div class="line"><a name="l00053"></a><span class="lineno"> 53</span>  <span class="keywordflow">if</span> (!parName.compare(<span class="stringliteral">"dac"</span>)) {</div>
<div class="line"><a name="l00054"></a><span class="lineno"> 54</span>  <a class="code" href="classPixTest.html#a4a5dfd992b810af6167f889302705d8b">setTestParameter</a>(<span class="stringliteral">"dac"</span>, sval); </div>
<div class="line"><a name="l00055"></a><span class="lineno"> 55</span>  fParDAC = sval;</div>
<div class="line"><a name="l00056"></a><span class="lineno"> 56</span>  LOG(logDEBUG) << <span class="stringliteral">" setting fParDAC ->"</span> << fParDAC</div>
<div class="line"><a name="l00057"></a><span class="lineno"> 57</span>  << <span class="stringliteral">"<- from sval = "</span> << sval;</div>
<div class="line"><a name="l00058"></a><span class="lineno"> 58</span>  }</div>
<div class="line"><a name="l00059"></a><span class="lineno"> 59</span> </div>
<div class="line"><a name="l00060"></a><span class="lineno"> 60</span>  <span class="keywordflow">if</span> (!parName.compare(<span class="stringliteral">"dacval"</span>)) {</div>
<div class="line"><a name="l00061"></a><span class="lineno"> 61</span>  <a class="code" href="classPixTest.html#a4a5dfd992b810af6167f889302705d8b">setTestParameter</a>(<span class="stringliteral">"dacval"</span>, sval); </div>
<div class="line"><a name="l00062"></a><span class="lineno"> 62</span>  fParDacVal = atoi(sval.c_str());</div>
<div class="line"><a name="l00063"></a><span class="lineno"> 63</span>  LOG(logDEBUG) << <span class="stringliteral">" setting fParDacVal ->"</span> << fParDacVal</div>
<div class="line"><a name="l00064"></a><span class="lineno"> 64</span>  << <span class="stringliteral">"<- from sval = "</span> << sval;</div>
<div class="line"><a name="l00065"></a><span class="lineno"> 65</span>  }</div>
<div class="line"><a name="l00066"></a><span class="lineno"> 66</span>  </div>
<div class="line"><a name="l00067"></a><span class="lineno"> 67</span>  <span class="keywordflow">if</span> (!parName.compare(<span class="stringliteral">"pix"</span>)) {</div>
<div class="line"><a name="l00068"></a><span class="lineno"> 68</span>  s1 = sval.find(<span class="stringliteral">","</span>);</div>
<div class="line"><a name="l00069"></a><span class="lineno"> 69</span>  <span class="keywordflow">if</span> (string::npos != s1) {</div>
<div class="line"><a name="l00070"></a><span class="lineno"> 70</span>  str1 = sval.substr(0, s1);</div>
<div class="line"><a name="l00071"></a><span class="lineno"> 71</span>  pixc = atoi(str1.c_str());</div>
<div class="line"><a name="l00072"></a><span class="lineno"> 72</span>  str2 = sval.substr(s1+1);</div>
<div class="line"><a name="l00073"></a><span class="lineno"> 73</span>  pixr = atoi(str2.c_str());</div>
<div class="line"><a name="l00074"></a><span class="lineno"> 74</span>  <a class="code" href="classPixTest.html#ac6f06a808eff91d1380736ef6c8690de">fPIX</a>.push_back(make_pair(pixc, pixr));</div>
<div class="line"><a name="l00075"></a><span class="lineno"> 75</span>  <a class="code" href="classPixTest.html#a66ae12f8af17fb25059ee7172bdbe7c4">addSelectedPixels</a>(sval); </div>
<div class="line"><a name="l00076"></a><span class="lineno"> 76</span>  LOG(logDEBUG) << <span class="stringliteral">" adding to FPIX ->"</span> << pixc << <span class="stringliteral">"/"</span> << pixr << <span class="stringliteral">" fPIX.size() = "</span> << <a class="code" href="classPixTest.html#ac6f06a808eff91d1380736ef6c8690de">fPIX</a>.size() ;</div>
<div class="line"><a name="l00077"></a><span class="lineno"> 77</span>  } <span class="keywordflow">else</span> {</div>
<div class="line"><a name="l00078"></a><span class="lineno"> 78</span>  <a class="code" href="classPixTest.html#a6b9238aa60242df30cb904983e49c601">clearSelectedPixels</a>();</div>
<div class="line"><a name="l00079"></a><span class="lineno"> 79</span>  LOG(logDEBUG) << <span class="stringliteral">" clear fPIX: "</span> << <a class="code" href="classPixTest.html#ac6f06a808eff91d1380736ef6c8690de">fPIX</a>.size(); </div>
<div class="line"><a name="l00080"></a><span class="lineno"> 80</span>  }</div>
<div class="line"><a name="l00081"></a><span class="lineno"> 81</span>  }</div>
<div class="line"><a name="l00082"></a><span class="lineno"> 82</span>  <span class="keywordflow">break</span>;</div>
<div class="line"><a name="l00083"></a><span class="lineno"> 83</span>  }</div>
<div class="line"><a name="l00084"></a><span class="lineno"> 84</span>  }</div>
<div class="line"><a name="l00085"></a><span class="lineno"> 85</span>  <span class="keywordflow">return</span> found;</div>
<div class="line"><a name="l00086"></a><span class="lineno"> 86</span> }</div>
<div class="line"><a name="l00087"></a><span class="lineno"> 87</span> </div>
<div class="line"><a name="l00088"></a><span class="lineno"> 88</span> <span class="keywordtype">void</span> PixTestPhOptimization::init() {</div>
<div class="line"><a name="l00089"></a><span class="lineno"> 89</span>  <a class="code" href="classPixTest.html#ac9b395930660e93c2812ad70bb0f7b0e">fDirectory</a> = gFile->GetDirectory(fName.c_str());</div>
<div class="line"><a name="l00090"></a><span class="lineno"> 90</span>  <span class="keywordflow">if</span>(!<a class="code" href="classPixTest.html#ac9b395930660e93c2812ad70bb0f7b0e">fDirectory</a>) {</div>
<div class="line"><a name="l00091"></a><span class="lineno"> 91</span>  <a class="code" href="classPixTest.html#ac9b395930660e93c2812ad70bb0f7b0e">fDirectory</a> = gFile->mkdir(fName.c_str());</div>
<div class="line"><a name="l00092"></a><span class="lineno"> 92</span>  }</div>
<div class="line"><a name="l00093"></a><span class="lineno"> 93</span>  <a class="code" href="classPixTest.html#ac9b395930660e93c2812ad70bb0f7b0e">fDirectory</a>->cd();</div>
<div class="line"><a name="l00094"></a><span class="lineno"> 94</span> }</div>
<div class="line"><a name="l00095"></a><span class="lineno"> 95</span> </div>
<div class="line"><a name="l00096"></a><span class="lineno"> 96</span> <span class="keywordtype">void</span> PixTestPhOptimization::bookHist(<span class="keywordtype">string</span> <span class="comment">/*name*/</span>) {}</div>
<div class="line"><a name="l00097"></a><span class="lineno"> 97</span> </div>
<div class="line"><a name="l00098"></a><span class="lineno"> 98</span> PixTestPhOptimization::~PixTestPhOptimization() {}</div>
<div class="line"><a name="l00099"></a><span class="lineno"> 99</span> </div>
<div class="line"><a name="l00100"></a><span class="lineno"><a class="line" href="classPixTestPhOptimization.html#a8d28fec61dfaafccc8f14fa3c1012a41"> 100</a></span> <span class="keywordtype">void</span> <a class="code" href="classPixTestPhOptimization.html#a8d28fec61dfaafccc8f14fa3c1012a41">PixTestPhOptimization::doTest</a>() {</div>
<div class="line"><a name="l00101"></a><span class="lineno"> 101</span> </div>
<div class="line"><a name="l00102"></a><span class="lineno"> 102</span>  TStopwatch t;</div>
<div class="line"><a name="l00103"></a><span class="lineno"> 103</span> </div>
<div class="line"><a name="l00104"></a><span class="lineno"> 104</span>  <a class="code" href="classPixTest.html#a0e55eb89963ac4b0671846a217f49efb">cacheDacs</a>();</div>
<div class="line"><a name="l00105"></a><span class="lineno"> 105</span>  bigBanner(Form(<span class="stringliteral">"PixTestPhOptimization::doTest() Ntrig = %d, singlePix = %d"</span>, fParNtrig, (fFlagSinglePix?1:0)));</div>
<div class="line"><a name="l00106"></a><span class="lineno"> 106</span>  <a class="code" href="classPixTest.html#ac9b395930660e93c2812ad70bb0f7b0e">fDirectory</a>->cd();</div>
<div class="line"><a name="l00107"></a><span class="lineno"> 107</span>  <a class="code" href="classPixTest.html#acc360989384e39de77b7ad5548b1b53f">PixTest::update</a>();</div>
<div class="line"><a name="l00108"></a><span class="lineno"> 108</span> </div>
<div class="line"><a name="l00109"></a><span class="lineno"> 109</span>  TH1D *h1(0); </div>
<div class="line"><a name="l00110"></a><span class="lineno"> 110</span>  vector<uint8_t> rocIds = <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a3bbaa8cf5eb2bd76411e924952a2081e">_dut</a>-><a class="code" href="classpxar_1_1dut.html#a630bc382889766282de95bec85af766e">getEnabledRocIDs</a>(); </div>
<div class="line"><a name="l00111"></a><span class="lineno"> 111</span> <span class="comment">// LOG(logDEBUG)<<"Enabled ROCs vector has size: "<<rocIds.size();</span></div>
<div class="line"><a name="l00112"></a><span class="lineno"> 112</span> <span class="comment">// LOG(logDEBUG)<<"ROC "<<(int)rocIds[0]<<" is enabled";</span></div>
<div class="line"><a name="l00113"></a><span class="lineno"> 113</span> <span class="comment">// for(unsigned int iroc=0; iroc < rocIds.size(); iroc++){</span></div>
<div class="line"><a name="l00114"></a><span class="lineno"> 114</span> <span class="comment">// LOG(logDEBUG)<<"ROC "<<(int)rocIds[iroc]<<" is enabled";</span></div>
<div class="line"><a name="l00115"></a><span class="lineno"> 115</span> <span class="comment">// }</span></div>
<div class="line"><a name="l00116"></a><span class="lineno"> 116</span>  <span class="keywordtype">string</span> name, title;</div>
<div class="line"><a name="l00117"></a><span class="lineno"> 117</span> </div>
<div class="line"><a name="l00118"></a><span class="lineno"> 118</span>  <span class="comment">//looking for inefficient pixels, so that they can be avoided</span></div>
<div class="line"><a name="l00119"></a><span class="lineno"> 119</span>  std::vector<std::pair<uint8_t, pair<int,int> > > badPixels;</div>
<div class="line"><a name="l00120"></a><span class="lineno"> 120</span>  BlacklistPixels(badPixels, 10);</div>
<div class="line"><a name="l00121"></a><span class="lineno"> 121</span> </div>
<div class="line"><a name="l00122"></a><span class="lineno"> 122</span>  <span class="comment">//Set from trim file minimum vcal where PH is sampled for minphpix search</span></div>
<div class="line"><a name="l00123"></a><span class="lineno"> 123</span>  SetMinThr();</div>
<div class="line"><a name="l00124"></a><span class="lineno"> 124</span> </div>
<div class="line"><a name="l00125"></a><span class="lineno"> 125</span>  <span class="comment">//flag allows to choose between PhOpt on single pixel (1) or on the whole roc (0)</span></div>
<div class="line"><a name="l00126"></a><span class="lineno"> 126</span>  pair<int, pxar::pixel> maxpixel;</div>
<div class="line"><a name="l00127"></a><span class="lineno"> 127</span>  pair<int, pxar::pixel> minpixel;</div>
<div class="line"><a name="l00128"></a><span class="lineno"> 128</span>  map<int, pxar::pixel> maxpixels;</div>
<div class="line"><a name="l00129"></a><span class="lineno"> 129</span>  map<int, pxar::pixel> minpixels;</div>
<div class="line"><a name="l00130"></a><span class="lineno"> 130</span>  map<int, int> minVcal;</div>
<div class="line"><a name="l00131"></a><span class="lineno"> 131</span>  </div>
<div class="line"><a name="l00132"></a><span class="lineno"> 132</span>  <span class="keywordflow">if</span>(fFlagSinglePix){</div>
<div class="line"><a name="l00133"></a><span class="lineno"> 133</span>  <span class="keywordflow">for</span> (<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> iroc = 0; iroc < rocIds.size(); ++iroc){</div>
<div class="line"><a name="l00134"></a><span class="lineno"> 134</span>  LOG(logDEBUG)<<<span class="stringliteral">"**********Ph range will be optimised on a single random pixel***********"</span>;</div>
<div class="line"><a name="l00135"></a><span class="lineno"> 135</span>  <a class="code" href="classpxar_1_1pixel.html">pxar::pixel</a> randomPix;</div>
<div class="line"><a name="l00136"></a><span class="lineno"> 136</span>  randomPix= *(RandomPixel(badPixels, rocIds[iroc]));</div>
<div class="line"><a name="l00137"></a><span class="lineno"> 137</span>  LOG(logDEBUG)<<<span class="stringliteral">"In doTest(), randomCol "</span><<(int)randomPix.<a class="code" href="classpxar_1_1pixel.html#a715b0c16d22f93ccd6d9f192fc5aa65d">column</a>()<<<span class="stringliteral">", randomRow "</span><<(int)randomPix.<a class="code" href="classpxar_1_1pixel.html#ae69d1f5a422aa3a6f8b0a020aa5987c2">row</a>()<<<span class="stringliteral">", pixel "</span><<randomPix;</div>
<div class="line"><a name="l00138"></a><span class="lineno"> 138</span>  maxpixel.first = rocIds[iroc]; </div>
<div class="line"><a name="l00139"></a><span class="lineno"> 139</span>  maxpixel.second.<a class="code" href="classpxar_1_1pixel.html#a36fd1ae54c2348c5b47948e806b34f3b">setRoc</a>(rocIds[iroc]);</div>
<div class="line"><a name="l00140"></a><span class="lineno"> 140</span>  maxpixel.second.setColumn(randomPix.<a class="code" href="classpxar_1_1pixel.html#a715b0c16d22f93ccd6d9f192fc5aa65d">column</a>());</div>
<div class="line"><a name="l00141"></a><span class="lineno"> 141</span>  maxpixel.second.setRow(randomPix.<a class="code" href="classpxar_1_1pixel.html#ae69d1f5a422aa3a6f8b0a020aa5987c2">row</a>());</div>
<div class="line"><a name="l00142"></a><span class="lineno"> 142</span>  minpixel.first = iroc; </div>
<div class="line"><a name="l00143"></a><span class="lineno"> 143</span>  minpixel.second.setRoc(rocIds[iroc]);</div>
<div class="line"><a name="l00144"></a><span class="lineno"> 144</span>  minpixel.second.setColumn(randomPix.<a class="code" href="classpxar_1_1pixel.html#a715b0c16d22f93ccd6d9f192fc5aa65d">column</a>());</div>
<div class="line"><a name="l00145"></a><span class="lineno"> 145</span>  minpixel.second.setRow(randomPix.<a class="code" href="classpxar_1_1pixel.html#ae69d1f5a422aa3a6f8b0a020aa5987c2">row</a>());</div>
<div class="line"><a name="l00146"></a><span class="lineno"> 146</span>  LOG(logDEBUG)<<<span class="stringliteral">"random pixel: "</span><<maxpixel.second<<<span class="stringliteral">", "</span><<minpixel.second<<<span class="stringliteral">"is not on the blacklist"</span>;</div>
<div class="line"><a name="l00147"></a><span class="lineno"> 147</span>  maxpixels.insert(maxpixel);</div>
<div class="line"><a name="l00148"></a><span class="lineno"> 148</span>  minpixels.insert(minpixel);</div>
<div class="line"><a name="l00149"></a><span class="lineno"> 149</span>  }</div>
<div class="line"><a name="l00150"></a><span class="lineno"> 150</span>  }</div>
<div class="line"><a name="l00151"></a><span class="lineno"> 151</span>  <span class="keywordflow">else</span>{</div>
<div class="line"><a name="l00152"></a><span class="lineno"> 152</span>  LOG(logDEBUG)<<<span class="stringliteral">"**********Ph range will be optimised on the whole ROC***********"</span>;</div>
<div class="line"><a name="l00153"></a><span class="lineno"> 153</span>  <span class="comment">//getting highest ph pixel</span></div>
<div class="line"><a name="l00154"></a><span class="lineno"> 154</span>  GetMaxPhPixel(maxpixels, badPixels);</div>
<div class="line"><a name="l00155"></a><span class="lineno"> 155</span>  <span class="comment">//getting min ph pixel and finding its vcal threshold</span></div>
<div class="line"><a name="l00156"></a><span class="lineno"> 156</span>  GetMinPhPixel(minpixels, minVcal, badPixels);</div>
<div class="line"><a name="l00157"></a><span class="lineno"> 157</span>  }</div>
<div class="line"><a name="l00158"></a><span class="lineno"> 158</span> </div>
<div class="line"><a name="l00159"></a><span class="lineno"> 159</span>  <span class="keywordflow">for</span>(<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> roc_it = 0; roc_it < rocIds.size(); roc_it++){</div>
<div class="line"><a name="l00160"></a><span class="lineno"> 160</span>  LOG(logDEBUG)<<<span class="stringliteral">"vcal min "</span><<minVcal[roc_it]<<<span class="stringliteral">" on ROC"</span><<(int)rocIds[roc_it];</div>
<div class="line"><a name="l00161"></a><span class="lineno"> 161</span>  }</div>
<div class="line"><a name="l00162"></a><span class="lineno"> 162</span> </div>
<div class="line"><a name="l00163"></a><span class="lineno"> 163</span>  <span class="comment">//scan phoffset and phscale for max and min ph pixels</span></div>
<div class="line"><a name="l00164"></a><span class="lineno"> 164</span>  std::vector< std::pair<uint8_t, std::pair<uint8_t, std::vector<pxar::pixel> > > > dacdac_max;</div>
<div class="line"><a name="l00165"></a><span class="lineno"> 165</span>  std::vector< std::pair<uint8_t, std::pair<uint8_t, std::vector<pxar::pixel> > > > dacdac_min;</div>
<div class="line"><a name="l00166"></a><span class="lineno"> 166</span>  MaxPhVsDacDac(dacdac_max, maxpixels);</div>
<div class="line"><a name="l00167"></a><span class="lineno"> 167</span>  MinPhVsDacDac(dacdac_min, minpixels, minVcal);</div>
<div class="line"><a name="l00168"></a><span class="lineno"> 168</span> </div>
<div class="line"><a name="l00169"></a><span class="lineno"> 169</span>  <span class="comment">//search for optimal dac values in 3 steps</span></div>
<div class="line"><a name="l00170"></a><span class="lineno"> 170</span>  <span class="comment">//1. shrinking the PH to be completely inside the ADC range, adjusting phscale</span></div>
<div class="line"><a name="l00171"></a><span class="lineno"> 171</span>  map<uint8_t, int> ps_opt, po_opt;</div>
<div class="line"><a name="l00172"></a><span class="lineno"> 172</span>  <span class="keywordflow">for</span>(<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> roc_it = 0; roc_it < rocIds.size(); roc_it++){</div>
<div class="line"><a name="l00173"></a><span class="lineno"> 173</span>  po_opt[rocIds[roc_it]] = 120;</div>
<div class="line"><a name="l00174"></a><span class="lineno"> 174</span>  }</div>
<div class="line"><a name="l00175"></a><span class="lineno"> 175</span>  ps_opt = InsideRangePH(po_opt, dacdac_max, dacdac_min);</div>
<div class="line"><a name="l00176"></a><span class="lineno"> 176</span>  <span class="comment">//check for opt failure</span></div>
<div class="line"><a name="l00177"></a><span class="lineno"> 177</span>  <span class="keywordflow">for</span>(<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> roc_it = 0; roc_it < rocIds.size(); roc_it++){</div>
<div class="line"><a name="l00178"></a><span class="lineno"> 178</span>  <span class="keywordflow">if</span>(ps_opt[rocIds[roc_it]]==999){</div>
<div class="line"><a name="l00179"></a><span class="lineno"> 179</span>  LOG(logDEBUG)<<<span class="stringliteral">"PH optimization failed on ROC "</span><<(int)rocIds[roc_it]<<endl<<<span class="stringliteral">"Please run PreTest or try PhOptimization on a random pixel"</span>;</div>
<div class="line"><a name="l00180"></a><span class="lineno"> 180</span>  }</div>
<div class="line"><a name="l00181"></a><span class="lineno"> 181</span>  }</div>
<div class="line"><a name="l00182"></a><span class="lineno"> 182</span>  <span class="comment">//2. centring PH curve adjusting phoffset</span></div>
<div class="line"><a name="l00183"></a><span class="lineno"> 183</span>  po_opt = CentrePhRange(po_opt, ps_opt, dacdac_max, dacdac_min);</div>
<div class="line"><a name="l00184"></a><span class="lineno"> 184</span>  </div>
<div class="line"><a name="l00185"></a><span class="lineno"> 185</span>  <span class="comment">//3. stretching curve adjusting phscale</span></div>
<div class="line"><a name="l00186"></a><span class="lineno"> 186</span>  ps_opt = StretchPH(po_opt, ps_opt, dacdac_max, dacdac_min);</div>
<div class="line"><a name="l00187"></a><span class="lineno"> 187</span>  </div>
<div class="line"><a name="l00188"></a><span class="lineno"> 188</span>  <span class="comment">//set optimized dacs and save</span></div>
<div class="line"><a name="l00189"></a><span class="lineno"> 189</span>  <a class="code" href="classPixTest.html#adcf13ea29a336bdbea421922e8e5128a">restoreDacs</a>();</div>
<div class="line"><a name="l00190"></a><span class="lineno"> 190</span>  <span class="keywordflow">for</span>(<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> roc_it = 0; roc_it < rocIds.size(); roc_it++){</div>
<div class="line"><a name="l00191"></a><span class="lineno"> 191</span>  <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a13fad3782f3cd2f76acd6d9ae84e72d1">setDAC</a>(<span class="stringliteral">"phscale"</span>,ps_opt[rocIds[roc_it]], rocIds[roc_it] );</div>
<div class="line"><a name="l00192"></a><span class="lineno"> 192</span>  <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a13fad3782f3cd2f76acd6d9ae84e72d1">setDAC</a>(<span class="stringliteral">"phoffset"</span>,po_opt[rocIds[roc_it]], rocIds[roc_it]);</div>
<div class="line"><a name="l00193"></a><span class="lineno"> 193</span>  }</div>
<div class="line"><a name="l00194"></a><span class="lineno"> 194</span>  <a class="code" href="classPixTest.html#a5b686c74b54f79a4ab3fb010a315c4e3">saveDacs</a>();</div>
<div class="line"><a name="l00195"></a><span class="lineno"> 195</span> </div>
<div class="line"><a name="l00196"></a><span class="lineno"> 196</span>  <a class="code" href="classPixTest.html#a0e55eb89963ac4b0671846a217f49efb">cacheDacs</a>(); </div>
<div class="line"><a name="l00197"></a><span class="lineno"> 197</span>  <span class="comment">//draw figures of merit of optimization</span></div>
<div class="line"><a name="l00198"></a><span class="lineno"> 198</span>  DrawPhMaps(minVcal, badPixels);</div>
<div class="line"><a name="l00199"></a><span class="lineno"> 199</span>  DrawPhCurves(maxpixels, minpixels, po_opt, ps_opt);</div>
<div class="line"><a name="l00200"></a><span class="lineno"> 200</span>  <a class="code" href="classPixTest.html#adcf13ea29a336bdbea421922e8e5128a">restoreDacs</a>();</div>
<div class="line"><a name="l00201"></a><span class="lineno"> 201</span> </div>
<div class="line"><a name="l00202"></a><span class="lineno"> 202</span>  <span class="keywordflow">for</span> (list<TH1*>::iterator il = <a class="code" href="classPixTest.html#adbd070a27e5299a4f2b80b948fbee131">fHistList</a>.begin(); il != <a class="code" href="classPixTest.html#adbd070a27e5299a4f2b80b948fbee131">fHistList</a>.end(); ++il) {</div>
<div class="line"><a name="l00203"></a><span class="lineno"> 203</span>  (*il)->Draw(<a class="code" href="classPixTest.html#a61f85462428c3ab7ca35fc0df4bbbd3a">getHistOption</a>(*il).c_str());</div>
<div class="line"><a name="l00204"></a><span class="lineno"> 204</span>  <a class="code" href="classPixTest.html#acc360989384e39de77b7ad5548b1b53f">PixTest::update</a>();</div>
<div class="line"><a name="l00205"></a><span class="lineno"> 205</span>  }</div>
<div class="line"><a name="l00206"></a><span class="lineno"> 206</span>  <a class="code" href="classPixTest.html#a60a5a16e545cca3bacf2ad9c9bd8a320">fDisplayedHist</a> = find(<a class="code" href="classPixTest.html#adbd070a27e5299a4f2b80b948fbee131">fHistList</a>.begin(), <a class="code" href="classPixTest.html#adbd070a27e5299a4f2b80b948fbee131">fHistList</a>.end(), h1);</div>
<div class="line"><a name="l00207"></a><span class="lineno"> 207</span> </div>
<div class="line"><a name="l00208"></a><span class="lineno"> 208</span>  <span class="comment">// -- print summary information</span></div>
<div class="line"><a name="l00209"></a><span class="lineno"> 209</span>  <span class="keywordtype">string</span> psString(<span class="stringliteral">""</span>), poString(<span class="stringliteral">""</span>); </div>
<div class="line"><a name="l00210"></a><span class="lineno"> 210</span>  <span class="keywordflow">for</span> (<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> i = 0; i < rocIds.size(); ++i) {</div>
<div class="line"><a name="l00211"></a><span class="lineno"> 211</span>  psString += Form(<span class="stringliteral">" %3d"</span>, <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a3bbaa8cf5eb2bd76411e924952a2081e">_dut</a>-><a class="code" href="classpxar_1_1dut.html#af31d9705acaf0cdf7d5d1390e8ae121e">getDAC</a>(rocIds[i], <span class="stringliteral">"phscale"</span>));</div>
<div class="line"><a name="l00212"></a><span class="lineno"> 212</span>  poString += Form(<span class="stringliteral">" %3d"</span>, <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a3bbaa8cf5eb2bd76411e924952a2081e">_dut</a>-><a class="code" href="classpxar_1_1dut.html#af31d9705acaf0cdf7d5d1390e8ae121e">getDAC</a>(rocIds[i], <span class="stringliteral">"phoffset"</span>));</div>
<div class="line"><a name="l00213"></a><span class="lineno"> 213</span>  }</div>
<div class="line"><a name="l00214"></a><span class="lineno"> 214</span> </div>
<div class="line"><a name="l00215"></a><span class="lineno"> 215</span>  <span class="keywordtype">int</span> seconds = t.RealTime(); </div>
<div class="line"><a name="l00216"></a><span class="lineno"> 216</span>  LOG(logINFO) << <span class="stringliteral">"PixTestPhOptimization::doTest() done, duration: "</span> << seconds << <span class="stringliteral">" seconds"</span>;</div>
<div class="line"><a name="l00217"></a><span class="lineno"> 217</span>  LOG(logINFO) << <span class="stringliteral">"PH scale (per ROC): "</span> << psString;</div>
<div class="line"><a name="l00218"></a><span class="lineno"> 218</span>  LOG(logINFO) << <span class="stringliteral">"PH offset (per ROC): "</span> << poString;</div>
<div class="line"><a name="l00219"></a><span class="lineno"> 219</span>  </div>
<div class="line"><a name="l00220"></a><span class="lineno"> 220</span>  }</div>
<div class="line"><a name="l00221"></a><span class="lineno"> 221</span> </div>
<div class="line"><a name="l00222"></a><span class="lineno"> 222</span> <span class="keywordtype">void</span> PixTestPhOptimization::BlacklistPixels(std::vector<std::pair<uint8_t, pair<int, int> > > &badPixels, <span class="keywordtype">int</span> aliveTrig){</div>
<div class="line"><a name="l00223"></a><span class="lineno"> 223</span>  <span class="comment">//makes a list of inefficient pixels, to be avoided during optimization</span></div>
<div class="line"><a name="l00224"></a><span class="lineno"> 224</span>  <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a3bbaa8cf5eb2bd76411e924952a2081e">_dut</a>-><a class="code" href="classpxar_1_1dut.html#a79b4faf65b2296a4dda907ed3284e7ce">testAllPixels</a>(<span class="keyword">true</span>);</div>
<div class="line"><a name="l00225"></a><span class="lineno"> 225</span>  <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a3bbaa8cf5eb2bd76411e924952a2081e">_dut</a>-><a class="code" href="classpxar_1_1dut.html#a3547a151355a9920a706af71f472e65e">maskAllPixels</a>(<span class="keyword">false</span>);</div>
<div class="line"><a name="l00226"></a><span class="lineno"> 226</span> </div>
<div class="line"><a name="l00227"></a><span class="lineno"> 227</span>  vector<uint8_t> vVcal = <a class="code" href="classPixTest.html#a97767d30773519066500afcf24431e87">getDacs</a>(<span class="stringliteral">"vcal"</span>); </div>
<div class="line"><a name="l00228"></a><span class="lineno"> 228</span>  vector<uint8_t> vCreg = <a class="code" href="classPixTest.html#a97767d30773519066500afcf24431e87">getDacs</a>(<span class="stringliteral">"ctrlreg"</span>); </div>
<div class="line"><a name="l00229"></a><span class="lineno"> 229</span> </div>
<div class="line"><a name="l00230"></a><span class="lineno"> 230</span>  vector<TH2D*> testEff = <a class="code" href="classPixTest.html#ae7e51895a573e8df70fb6809d01161aa">efficiencyMaps</a>(<span class="stringliteral">"PixelAlive"</span>, aliveTrig);</div>
<div class="line"><a name="l00231"></a><span class="lineno"> 231</span>  vector<uint8_t> rocIds = <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a3bbaa8cf5eb2bd76411e924952a2081e">_dut</a>-><a class="code" href="classpxar_1_1dut.html#a630bc382889766282de95bec85af766e">getEnabledRocIDs</a>(); </div>
<div class="line"><a name="l00232"></a><span class="lineno"> 232</span>  std::pair<uint8_t, pair<int, int> > badPix;</div>
<div class="line"><a name="l00233"></a><span class="lineno"> 233</span>  Double_t eff=0.;</div>
<div class="line"><a name="l00234"></a><span class="lineno"> 234</span>  <span class="keywordflow">for</span>(uint8_t rocid = 0; rocid<rocIds.size(); rocid++){</div>
<div class="line"><a name="l00235"></a><span class="lineno"> 235</span>  <span class="keywordflow">for</span>(<span class="keywordtype">int</span> r=0; r<80; r++){</div>
<div class="line"><a name="l00236"></a><span class="lineno"> 236</span>  <span class="keywordflow">for</span>(<span class="keywordtype">int</span> c=0; c<52; c++){</div>
<div class="line"><a name="l00237"></a><span class="lineno"> 237</span>  eff = testEff[rocid]->GetBinContent( testEff[rocid]->FindFixBin((<span class="keywordtype">double</span>)c + 0.5, (<span class="keywordtype">double</span>)r+0.5) );</div>
<div class="line"><a name="l00238"></a><span class="lineno"> 238</span>  <span class="keywordflow">if</span>(eff<aliveTrig){</div>
<div class="line"><a name="l00239"></a><span class="lineno"> 239</span>  LOG(logDEBUG)<<<span class="stringliteral">"Pixel ["</span><<(int)rocIds[rocid]<<<span class="stringliteral">", "</span><<(<span class="keywordtype">int</span>)c<<<span class="stringliteral">", "</span><<(int)r<<<span class="stringliteral">"] has eff "</span><<eff<<<span class="stringliteral">"/"</span><<aliveTrig;</div>
<div class="line"><a name="l00240"></a><span class="lineno"> 240</span>  badPix.first = rocIds[rocid];</div>
<div class="line"><a name="l00241"></a><span class="lineno"> 241</span>  badPix.second.first = c;</div>
<div class="line"><a name="l00242"></a><span class="lineno"> 242</span>  badPix.second.second = r;</div>
<div class="line"><a name="l00243"></a><span class="lineno"> 243</span>  LOG(logDEBUG)<<<span class="stringliteral">"bad Pixel found and blacklisted: ["</span><<(int)badPix.first<<<span class="stringliteral">", "</span><<(<span class="keywordtype">int</span>)badPix.second.first<<<span class="stringliteral">", "</span><<(int)badPix.second.second<<<span class="stringliteral">"]"</span>;</div>
<div class="line"><a name="l00244"></a><span class="lineno"> 244</span>  (badPixels).push_back(badPix);</div>
<div class="line"><a name="l00245"></a><span class="lineno"> 245</span>  }</div>
<div class="line"><a name="l00246"></a><span class="lineno"> 246</span>  }</div>
<div class="line"><a name="l00247"></a><span class="lineno"> 247</span>  }</div>
<div class="line"><a name="l00248"></a><span class="lineno"> 248</span>  }</div>
<div class="line"><a name="l00249"></a><span class="lineno"> 249</span>  <a class="code" href="classPixTest.html#a074a6c59654a72fc4321ac039dd6736d">setDacs</a>(<span class="stringliteral">"vcal"</span>, vVcal); </div>
<div class="line"><a name="l00250"></a><span class="lineno"> 250</span>  <a class="code" href="classPixTest.html#a074a6c59654a72fc4321ac039dd6736d">setDacs</a>(<span class="stringliteral">"ctrlreg"</span>, vCreg); </div>
<div class="line"><a name="l00251"></a><span class="lineno"> 251</span>  LOG(logDEBUG)<<<span class="stringliteral">"Number of bad pixels found: "</span><<badPixels.size();</div>
<div class="line"><a name="l00252"></a><span class="lineno"> 252</span> }</div>
<div class="line"><a name="l00253"></a><span class="lineno"> 253</span> </div>
<div class="line"><a name="l00254"></a><span class="lineno"> 254</span> </div>
<div class="line"><a name="l00255"></a><span class="lineno"> 255</span> <a class="code" href="classpxar_1_1pixel.html">pxar::pixel</a>* PixTestPhOptimization::RandomPixel(std::vector<std::pair<uint8_t, pair<int, int> > > &badPixels, uint8_t iroc){</div>
<div class="line"><a name="l00256"></a><span class="lineno"> 256</span>  <span class="comment">//Returns a random pixel, taking care it is not on the blacklist</span></div>
<div class="line"><a name="l00257"></a><span class="lineno"> 257</span>  <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a13fad3782f3cd2f76acd6d9ae84e72d1">setDAC</a>(<span class="stringliteral">"ctrlreg"</span>,4);</div>
<div class="line"><a name="l00258"></a><span class="lineno"> 258</span>  <span class="keywordtype">bool</span> isPixGood=<span class="keyword">true</span>;</div>
<div class="line"><a name="l00259"></a><span class="lineno"> 259</span>  <a class="code" href="classpxar_1_1pixel.html">pxar::pixel</a> *randPixel= <span class="keyword">new</span> <a class="code" href="classpxar_1_1pixel.html">pixel</a>();</div>
<div class="line"><a name="l00260"></a><span class="lineno"> 260</span>  srand(<span class="keywordtype">int</span>(time(NULL)));</div>
<div class="line"><a name="l00261"></a><span class="lineno"> 261</span>  <span class="keywordtype">int</span> random_col=-1, random_row=-1;</div>
<div class="line"><a name="l00262"></a><span class="lineno"> 262</span>  <span class="keywordflow">do</span>{</div>
<div class="line"><a name="l00263"></a><span class="lineno"> 263</span>  random_col = rand() % 52;</div>
<div class="line"><a name="l00264"></a><span class="lineno"> 264</span>  random_row = rand() % 80;</div>
<div class="line"><a name="l00265"></a><span class="lineno"> 265</span>  LOG(logDEBUG)<<<span class="stringliteral">"random pixel: ["</span><<iroc<<<span class="stringliteral">", "</span><<random_col<<<span class="stringliteral">", "</span><<random_row<<<span class="stringliteral">"]"</span>;</div>
<div class="line"><a name="l00266"></a><span class="lineno"> 266</span>  isPixGood=<span class="keyword">true</span>;</div>
<div class="line"><a name="l00267"></a><span class="lineno"> 267</span>  <span class="keywordflow">for</span>(std::vector<std::pair<uint8_t, pair<int, int> > >::iterator bad_it = badPixels.begin(); bad_it != badPixels.end(); bad_it++){</div>
<div class="line"><a name="l00268"></a><span class="lineno"> 268</span>  <span class="keywordflow">if</span>(bad_it->first == iroc && bad_it->second.first == random_col && bad_it->second.second == random_row){</div>
<div class="line"><a name="l00269"></a><span class="lineno"> 269</span>  isPixGood=<span class="keyword">false</span>;</div>
<div class="line"><a name="l00270"></a><span class="lineno"> 270</span>  }</div>
<div class="line"><a name="l00271"></a><span class="lineno"> 271</span>  }</div>
<div class="line"><a name="l00272"></a><span class="lineno"> 272</span>  LOG(logDEBUG)<<<span class="stringliteral">"is the random pixel good? "</span><<isPixGood;</div>
<div class="line"><a name="l00273"></a><span class="lineno"> 273</span>  }<span class="keywordflow">while</span>(!isPixGood);</div>
<div class="line"><a name="l00274"></a><span class="lineno"> 274</span>  randPixel-><a class="code" href="classpxar_1_1pixel.html#a36fd1ae54c2348c5b47948e806b34f3b">setRoc</a>(iroc);</div>
<div class="line"><a name="l00275"></a><span class="lineno"> 275</span>  randPixel-><a class="code" href="classpxar_1_1pixel.html#a75358ad6a7b9de5493cd4b53711df2a6">setColumn</a>(random_col);</div>
<div class="line"><a name="l00276"></a><span class="lineno"> 276</span>  randPixel-><a class="code" href="classpxar_1_1pixel.html#aea34a696665a1ffbcca6e8e4a12a6fc5">setRow</a>(random_row);</div>
<div class="line"><a name="l00277"></a><span class="lineno"> 277</span>  LOG(logDEBUG)<<<span class="stringliteral">"In RandomPixel(), rocId "</span><<iroc<<<span class="stringliteral">", randomCol "</span><<(int)randPixel-><a class="code" href="classpxar_1_1pixel.html#a715b0c16d22f93ccd6d9f192fc5aa65d">column</a>()<<<span class="stringliteral">", randomRow "</span><<(int)randPixel-><a class="code" href="classpxar_1_1pixel.html#ae69d1f5a422aa3a6f8b0a020aa5987c2">row</a>()<<<span class="stringliteral">", pixel "</span><<randPixel;</div>
<div class="line"><a name="l00278"></a><span class="lineno"> 278</span>  <span class="keywordflow">return</span> randPixel;</div>
<div class="line"><a name="l00279"></a><span class="lineno"> 279</span> }</div>
<div class="line"><a name="l00280"></a><span class="lineno"> 280</span> </div>
<div class="line"><a name="l00281"></a><span class="lineno"> 281</span> <span class="keywordtype">void</span> PixTestPhOptimization::GetMaxPhPixel(map<int, pxar::pixel > &maxpixels, std::vector<std::pair<uint8_t, pair<int,int> > > &badPixels){</div>
<div class="line"><a name="l00282"></a><span class="lineno"> 282</span>  <span class="comment">//looks for the pixel with the highest Ph at vcal = 255, taking care the pixels are not already saturating (ph=255)</span></div>
<div class="line"><a name="l00283"></a><span class="lineno"> 283</span>  <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a3bbaa8cf5eb2bd76411e924952a2081e">_dut</a>-><a class="code" href="classpxar_1_1dut.html#a79b4faf65b2296a4dda907ed3284e7ce">testAllPixels</a>(<span class="keyword">true</span>);</div>
<div class="line"><a name="l00284"></a><span class="lineno"> 284</span>  <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a3bbaa8cf5eb2bd76411e924952a2081e">_dut</a>-><a class="code" href="classpxar_1_1dut.html#a3547a151355a9920a706af71f472e65e">maskAllPixels</a>(<span class="keyword">false</span>);</div>
<div class="line"><a name="l00285"></a><span class="lineno"> 285</span>  vector<uint8_t> rocIds = <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a3bbaa8cf5eb2bd76411e924952a2081e">_dut</a>-><a class="code" href="classpxar_1_1dut.html#a630bc382889766282de95bec85af766e">getEnabledRocIDs</a>(); </div>
<div class="line"><a name="l00286"></a><span class="lineno"> 286</span>  <span class="keywordtype">bool</span> isPixGood=<span class="keyword">true</span>;</div>
<div class="line"><a name="l00287"></a><span class="lineno"> 287</span>  <span class="keywordtype">int</span> maxph = 255;</div>
<div class="line"><a name="l00288"></a><span class="lineno"> 288</span>  <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a13fad3782f3cd2f76acd6d9ae84e72d1">setDAC</a>(<span class="stringliteral">"phoffset"</span>, 200);</div>
<div class="line"><a name="l00289"></a><span class="lineno"> 289</span>  <span class="keywordtype">int</span> init_phScale =200;</div>
<div class="line"><a name="l00290"></a><span class="lineno"> 290</span>  <span class="keywordtype">int</span> flag_maxPh=0;</div>
<div class="line"><a name="l00291"></a><span class="lineno"> 291</span>  pair<int, pxar::pixel> maxpixel;</div>
<div class="line"><a name="l00292"></a><span class="lineno"> 292</span>  maxpixel.second.setValue(0);</div>
<div class="line"><a name="l00293"></a><span class="lineno"> 293</span>  std::vector<pxar::pixel> result;</div>
<div class="line"><a name="l00294"></a><span class="lineno"> 294</span>  <span class="keywordflow">while</span>((maxph>254 || maxph==0) && flag_maxPh<52){</div>
<div class="line"><a name="l00295"></a><span class="lineno"> 295</span>  result.clear();</div>
<div class="line"><a name="l00296"></a><span class="lineno"> 296</span>  <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a13fad3782f3cd2f76acd6d9ae84e72d1">setDAC</a>(<span class="stringliteral">"phscale"</span>, init_phScale);</div>
<div class="line"><a name="l00297"></a><span class="lineno"> 297</span>  <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a13fad3782f3cd2f76acd6d9ae84e72d1">setDAC</a>(<span class="stringliteral">"vcal"</span>,255);</div>
<div class="line"><a name="l00298"></a><span class="lineno"> 298</span>  <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a13fad3782f3cd2f76acd6d9ae84e72d1">setDAC</a>(<span class="stringliteral">"ctrlreg"</span>,4);</div>
<div class="line"><a name="l00299"></a><span class="lineno"> 299</span>  <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a13fad3782f3cd2f76acd6d9ae84e72d1">setDAC</a>(<span class="stringliteral">"phoffset"</span>,200); </div>
<div class="line"><a name="l00300"></a><span class="lineno"> 300</span>  <span class="keywordtype">int</span> cnt(0); </div>
<div class="line"><a name="l00301"></a><span class="lineno"> 301</span>  <span class="keywordtype">bool</span> done(<span class="keyword">false</span>);</div>
<div class="line"><a name="l00302"></a><span class="lineno"> 302</span>  <span class="keywordflow">while</span> (!done) {</div>
<div class="line"><a name="l00303"></a><span class="lineno"> 303</span>  <span class="keywordflow">try</span> {</div>
<div class="line"><a name="l00304"></a><span class="lineno"> 304</span>  result = <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a9de11051f5c0babffd3cdef948853012">getPulseheightMap</a>(0, 10);</div>
<div class="line"><a name="l00305"></a><span class="lineno"> 305</span>  done = <span class="keyword">true</span>;</div>
<div class="line"><a name="l00306"></a><span class="lineno"> 306</span>  } <span class="keywordflow">catch</span>(<a class="code" href="classpxar_1_1pxarException.html">pxarException</a> &e) {</div>
<div class="line"><a name="l00307"></a><span class="lineno"> 307</span>  LOG(logCRITICAL) << <span class="stringliteral">"pXar execption: "</span><< e.what(); </div>
<div class="line"><a name="l00308"></a><span class="lineno"> 308</span>  ++cnt;</div>
<div class="line"><a name="l00309"></a><span class="lineno"> 309</span>  }</div>
<div class="line"><a name="l00310"></a><span class="lineno"> 310</span>  done = (cnt>5) || done;</div>
<div class="line"><a name="l00311"></a><span class="lineno"> 311</span>  }</div>
<div class="line"><a name="l00312"></a><span class="lineno"> 312</span>  </div>
<div class="line"><a name="l00313"></a><span class="lineno"> 313</span>  maxph=0;</div>
<div class="line"><a name="l00314"></a><span class="lineno"> 314</span>  LOG(logDEBUG) << <span class="stringliteral">"result size "</span><<result.size()<<endl;</div>
<div class="line"><a name="l00315"></a><span class="lineno"> 315</span>  <span class="comment">//check that the pixel showing highest PH on the module is not reaching 255</span></div>
<div class="line"><a name="l00316"></a><span class="lineno"> 316</span>  <span class="keywordflow">for</span>(std::vector<pxar::pixel>::iterator px = result.begin(); px != result.end(); px++) {</div>
<div class="line"><a name="l00317"></a><span class="lineno"> 317</span>  isPixGood=<span class="keyword">true</span>;</div>
<div class="line"><a name="l00318"></a><span class="lineno"> 318</span>  <span class="keywordflow">for</span>(std::vector<std::pair<uint8_t, pair<int, int> > >::iterator bad_it = badPixels.begin(); bad_it != badPixels.end(); bad_it++){</div>
<div class="line"><a name="l00319"></a><span class="lineno"> 319</span>  <span class="keywordflow">if</span>(bad_it->second.first == px->column() && bad_it->second.second == px->row() && bad_it->first == px->roc()){</div>
<div class="line"><a name="l00320"></a><span class="lineno"> 320</span>  isPixGood=<span class="keyword">false</span>;</div>
<div class="line"><a name="l00321"></a><span class="lineno"> 321</span>  }</div>
<div class="line"><a name="l00322"></a><span class="lineno"> 322</span>  }</div>
<div class="line"><a name="l00323"></a><span class="lineno"> 323</span>  <span class="keywordflow">if</span>(isPixGood && px->value() > maxph){</div>
<div class="line"><a name="l00324"></a><span class="lineno"> 324</span>  maxph = px->value();</div>
<div class="line"><a name="l00325"></a><span class="lineno"> 325</span>  }</div>
<div class="line"><a name="l00326"></a><span class="lineno"> 326</span>  }</div>
<div class="line"><a name="l00327"></a><span class="lineno"> 327</span>  <span class="comment">//should have flag for v2 or v2.1</span></div>
<div class="line"><a name="l00328"></a><span class="lineno"> 328</span>  init_phScale+=5;</div>
<div class="line"><a name="l00329"></a><span class="lineno"> 329</span>  flag_maxPh++;</div>
<div class="line"><a name="l00330"></a><span class="lineno"> 330</span>  }</div>
<div class="line"><a name="l00331"></a><span class="lineno"> 331</span>  <span class="comment">// Look for pixel with max. pulse height on every ROC:</span></div>
<div class="line"><a name="l00332"></a><span class="lineno"> 332</span>  <span class="keywordflow">for</span>(<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> iroc=0; iroc< rocIds.size(); iroc++){</div>
<div class="line"><a name="l00333"></a><span class="lineno"> 333</span>  maxph=0;</div>
<div class="line"><a name="l00334"></a><span class="lineno"> 334</span>  <span class="keywordflow">for</span>(std::vector<pxar::pixel>::iterator px = result.begin(); px != result.end(); px++) {</div>
<div class="line"><a name="l00335"></a><span class="lineno"> 335</span>  isPixGood=<span class="keyword">true</span>;</div>
<div class="line"><a name="l00336"></a><span class="lineno"> 336</span>  <span class="keywordflow">if</span>(px->value() > maxph && px->roc() == rocIds[iroc]){</div>
<div class="line"><a name="l00337"></a><span class="lineno"> 337</span>  <span class="keywordflow">for</span>(std::vector<std::pair<uint8_t, pair<int, int> > >::iterator bad_it = badPixels.begin(); bad_it != badPixels.end(); bad_it++){</div>
<div class="line"><a name="l00338"></a><span class="lineno"> 338</span>  <span class="keywordflow">if</span>(bad_it->second.first == px->column() && bad_it->second.second == px->row() && bad_it->first == px->roc()){</div>
<div class="line"><a name="l00339"></a><span class="lineno"> 339</span>  isPixGood=<span class="keyword">false</span>;</div>
<div class="line"><a name="l00340"></a><span class="lineno"> 340</span>  <span class="keywordflow">break</span>;</div>
<div class="line"><a name="l00341"></a><span class="lineno"> 341</span>  }</div>
<div class="line"><a name="l00342"></a><span class="lineno"> 342</span>  }</div>
<div class="line"><a name="l00343"></a><span class="lineno"> 343</span>  <span class="keywordflow">if</span>(isPixGood){</div>
<div class="line"><a name="l00344"></a><span class="lineno"> 344</span>  maxpixel = make_pair(iroc,*px);</div>
<div class="line"><a name="l00345"></a><span class="lineno"> 345</span>  maxph = px->value();</div>
<div class="line"><a name="l00346"></a><span class="lineno"> 346</span>  }</div>
<div class="line"><a name="l00347"></a><span class="lineno"> 347</span>  }</div>
<div class="line"><a name="l00348"></a><span class="lineno"> 348</span>  }</div>
<div class="line"><a name="l00349"></a><span class="lineno"> 349</span>  maxpixels.insert(maxpixel);</div>
<div class="line"><a name="l00350"></a><span class="lineno"> 350</span>  LOG(logDEBUG) << <span class="stringliteral">"maxPh "</span> << maxph <<<span class="stringliteral">" for ROC "</span><<maxpixel.first<<<span class="stringliteral">" on pixel "</span><<maxpixel.second << endl ; </div>
<div class="line"><a name="l00351"></a><span class="lineno"> 351</span>  }</div>
<div class="line"><a name="l00352"></a><span class="lineno"> 352</span> }</div>
<div class="line"><a name="l00353"></a><span class="lineno"> 353</span> </div>
<div class="line"><a name="l00354"></a><span class="lineno"> 354</span> <span class="keywordtype">void</span> PixTestPhOptimization::GetMinPhPixel(map<int, pxar::pixel > &minpixels, map<int, int> &minVcal, std::vector<std::pair<uint8_t, pair<int,int> > > &badPixels){</div>
<div class="line"><a name="l00355"></a><span class="lineno"> 355</span>  <span class="comment">//looks for the pixel with the lowest Ph at vcal = 1.2*trimValue, taking care the pixels are correclty responding (ph>0)</span></div>
<div class="line"><a name="l00356"></a><span class="lineno"> 356</span>  <span class="comment">//finds the min vcal at which the minphpixel can be sampled</span></div>
<div class="line"><a name="l00357"></a><span class="lineno"> 357</span>  <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a3bbaa8cf5eb2bd76411e924952a2081e">_dut</a>-><a class="code" href="classpxar_1_1dut.html#a79b4faf65b2296a4dda907ed3284e7ce">testAllPixels</a>(<span class="keyword">true</span>);</div>
<div class="line"><a name="l00358"></a><span class="lineno"> 358</span>  <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a3bbaa8cf5eb2bd76411e924952a2081e">_dut</a>-><a class="code" href="classpxar_1_1dut.html#a3547a151355a9920a706af71f472e65e">maskAllPixels</a>(<span class="keyword">false</span>);</div>
<div class="line"><a name="l00359"></a><span class="lineno"> 359</span>  vector<uint8_t> rocIds = <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a3bbaa8cf5eb2bd76411e924952a2081e">_dut</a>-><a class="code" href="classpxar_1_1dut.html#a630bc382889766282de95bec85af766e">getEnabledRocIDs</a>(); </div>
<div class="line"><a name="l00360"></a><span class="lineno"> 360</span>  <span class="keywordtype">bool</span> isPixGood=<span class="keyword">true</span>;</div>
<div class="line"><a name="l00361"></a><span class="lineno"> 361</span>  <span class="keywordtype">int</span> minph = 0;</div>
<div class="line"><a name="l00362"></a><span class="lineno"> 362</span>  <span class="keywordtype">int</span> init_phScale = 100;</div>
<div class="line"><a name="l00363"></a><span class="lineno"> 363</span>  <span class="keywordtype">int</span> flag_minPh=0;</div>
<div class="line"><a name="l00364"></a><span class="lineno"> 364</span>  pair<int, pxar::pixel> minpixel;</div>
<div class="line"><a name="l00365"></a><span class="lineno"> 365</span>  minpixel.second.setValue(0);</div>
<div class="line"><a name="l00366"></a><span class="lineno"> 366</span>  std::vector<pxar::pixel> result;</div>
<div class="line"><a name="l00367"></a><span class="lineno"> 367</span>  <span class="keywordflow">while</span>(minph<1 && flag_minPh<52){</div>
<div class="line"><a name="l00368"></a><span class="lineno"> 368</span>  result.clear();</div>
<div class="line"><a name="l00369"></a><span class="lineno"> 369</span>  <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a13fad3782f3cd2f76acd6d9ae84e72d1">setDAC</a>(<span class="stringliteral">"phscale"</span>, init_phScale);</div>
<div class="line"><a name="l00370"></a><span class="lineno"> 370</span>  <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a13fad3782f3cd2f76acd6d9ae84e72d1">setDAC</a>(<span class="stringliteral">"ctrlreg"</span>,0);</div>
<div class="line"><a name="l00371"></a><span class="lineno"> 371</span>  <span class="comment">// fApi->setDAC("vcal",fMinThr*1.2);</span></div>
<div class="line"><a name="l00372"></a><span class="lineno"> 372</span>  <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a13fad3782f3cd2f76acd6d9ae84e72d1">setDAC</a>(<span class="stringliteral">"vcal"</span>,130);</div>
<div class="line"><a name="l00373"></a><span class="lineno"> 373</span>  <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a13fad3782f3cd2f76acd6d9ae84e72d1">setDAC</a>(<span class="stringliteral">"phoffset"</span>,150); </div>
<div class="line"><a name="l00374"></a><span class="lineno"> 374</span>  <span class="keywordtype">int</span> cnt(0); </div>
<div class="line"><a name="l00375"></a><span class="lineno"> 375</span>  <span class="keywordtype">bool</span> done(<span class="keyword">false</span>);</div>
<div class="line"><a name="l00376"></a><span class="lineno"> 376</span>  <span class="keywordtype">int</span> size = 0;</div>
<div class="line"><a name="l00377"></a><span class="lineno"> 377</span>  <span class="keywordflow">while</span> (!(done && size !=0)) {</div>
<div class="line"><a name="l00378"></a><span class="lineno"> 378</span>  <span class="keywordflow">try</span> {</div>
<div class="line"><a name="l00379"></a><span class="lineno"> 379</span>  result = <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a9de11051f5c0babffd3cdef948853012">getPulseheightMap</a>(0, 10);</div>
<div class="line"><a name="l00380"></a><span class="lineno"> 380</span>  size = result.size();</div>
<div class="line"><a name="l00381"></a><span class="lineno"> 381</span>  ++cnt;</div>
<div class="line"><a name="l00382"></a><span class="lineno"> 382</span>  done = <span class="keyword">true</span>;</div>
<div class="line"><a name="l00383"></a><span class="lineno"> 383</span>  } <span class="keywordflow">catch</span>(<a class="code" href="classpxar_1_1pxarException.html">pxarException</a> &e) {</div>
<div class="line"><a name="l00384"></a><span class="lineno"> 384</span>  LOG(logCRITICAL) << <span class="stringliteral">"pXar execption: "</span><< e.what(); </div>
<div class="line"><a name="l00385"></a><span class="lineno"> 385</span>  ++cnt;</div>
<div class="line"><a name="l00386"></a><span class="lineno"> 386</span>  }</div>
<div class="line"><a name="l00387"></a><span class="lineno"> 387</span>  done = (cnt>5) || done;</div>
<div class="line"><a name="l00388"></a><span class="lineno"> 388</span>  }</div>
<div class="line"><a name="l00389"></a><span class="lineno"> 389</span>  minph=255;</div>
<div class="line"><a name="l00390"></a><span class="lineno"> 390</span>  LOG(logDEBUG) << <span class="stringliteral">"result size "</span><<result.size()<<endl;</div>
<div class="line"><a name="l00391"></a><span class="lineno"> 391</span>  <span class="comment">//check that the pixel showing lowest PH above 0 on the module</span></div>
<div class="line"><a name="l00392"></a><span class="lineno"> 392</span>  <span class="keywordflow">for</span>(std::vector<pxar::pixel>::iterator px = result.begin(); px != result.end(); px++) {</div>
<div class="line"><a name="l00393"></a><span class="lineno"> 393</span>  isPixGood=<span class="keyword">true</span>;</div>
<div class="line"><a name="l00394"></a><span class="lineno"> 394</span>  <span class="keywordflow">for</span>(std::vector<std::pair<uint8_t, pair<int, int> > >::iterator bad_it = badPixels.begin(); bad_it != badPixels.end(); bad_it++){</div>
<div class="line"><a name="l00395"></a><span class="lineno"> 395</span>  <span class="keywordflow">if</span>(bad_it->second.first == px->column() && bad_it->second.second == px->row() && bad_it->first == px->roc()){</div>
<div class="line"><a name="l00396"></a><span class="lineno"> 396</span>  isPixGood=<span class="keyword">false</span>;</div>
<div class="line"><a name="l00397"></a><span class="lineno"> 397</span>  <span class="keywordflow">break</span>;</div>
<div class="line"><a name="l00398"></a><span class="lineno"> 398</span>  }</div>
<div class="line"><a name="l00399"></a><span class="lineno"> 399</span>  }</div>
<div class="line"><a name="l00400"></a><span class="lineno"> 400</span>  <span class="keywordflow">if</span>(isPixGood && px->value() < minph){</div>
<div class="line"><a name="l00401"></a><span class="lineno"> 401</span>  minph = px->value();</div>
<div class="line"><a name="l00402"></a><span class="lineno"> 402</span>  }</div>
<div class="line"><a name="l00403"></a><span class="lineno"> 403</span>  }</div>
<div class="line"><a name="l00404"></a><span class="lineno"> 404</span>  <span class="comment">//should have flag for v2 or v2.1</span></div>
<div class="line"><a name="l00405"></a><span class="lineno"> 405</span>  init_phScale+=5;</div>
<div class="line"><a name="l00406"></a><span class="lineno"> 406</span>  flag_minPh++;</div>
<div class="line"><a name="l00407"></a><span class="lineno"> 407</span>  }</div>
<div class="line"><a name="l00408"></a><span class="lineno"> 408</span>  <span class="comment">// Look for pixel with min pulse height on every ROC:</span></div>
<div class="line"><a name="l00409"></a><span class="lineno"> 409</span>  <span class="keywordflow">for</span>(<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> iroc=0; iroc< rocIds.size(); iroc++){</div>
<div class="line"><a name="l00410"></a><span class="lineno"> 410</span>  minph=255;</div>
<div class="line"><a name="l00411"></a><span class="lineno"> 411</span>  <span class="keywordflow">for</span>(std::vector<pxar::pixel>::iterator px = result.begin(); px != result.end(); px++) {</div>
<div class="line"><a name="l00412"></a><span class="lineno"> 412</span>  isPixGood=<span class="keyword">true</span>;</div>
<div class="line"><a name="l00413"></a><span class="lineno"> 413</span>  <span class="keywordflow">if</span>(px->value() < minph && px->roc() == rocIds[iroc]){</div>
<div class="line"><a name="l00414"></a><span class="lineno"> 414</span>  <span class="keywordflow">for</span>(std::vector<std::pair<uint8_t, pair<int, int> > >::iterator bad_it = badPixels.begin(); bad_it != badPixels.end(); bad_it++){</div>
<div class="line"><a name="l00415"></a><span class="lineno"> 415</span>  <span class="keywordflow">if</span>(bad_it->second.first == px->column() && bad_it->second.second == px->row() && bad_it->first == px->roc()){</div>
<div class="line"><a name="l00416"></a><span class="lineno"> 416</span>  isPixGood=<span class="keyword">false</span>;</div>
<div class="line"><a name="l00417"></a><span class="lineno"> 417</span>  <span class="keywordflow">break</span>;</div>
<div class="line"><a name="l00418"></a><span class="lineno"> 418</span>  }</div>
<div class="line"><a name="l00419"></a><span class="lineno"> 419</span>  }</div>
<div class="line"><a name="l00420"></a><span class="lineno"> 420</span>  <span class="keywordflow">if</span>(isPixGood){</div>
<div class="line"><a name="l00421"></a><span class="lineno"> 421</span>  minpixel = make_pair(iroc,*px);</div>
<div class="line"><a name="l00422"></a><span class="lineno"> 422</span>  minph = px->value();</div>
<div class="line"><a name="l00423"></a><span class="lineno"> 423</span>  }</div>
<div class="line"><a name="l00424"></a><span class="lineno"> 424</span>  }</div>
<div class="line"><a name="l00425"></a><span class="lineno"> 425</span>  }</div>
<div class="line"><a name="l00426"></a><span class="lineno"> 426</span>  minpixels.insert(minpixel);</div>
<div class="line"><a name="l00427"></a><span class="lineno"> 427</span>  LOG(logDEBUG) << <span class="stringliteral">"minPh "</span> << minph <<<span class="stringliteral">" for ROC "</span><<minpixel.first<<<span class="stringliteral">" on pixel "</span><<minpixel.second << endl ; </div>
<div class="line"><a name="l00428"></a><span class="lineno"> 428</span>  }</div>
<div class="line"><a name="l00429"></a><span class="lineno"> 429</span>  </div>
<div class="line"><a name="l00430"></a><span class="lineno"> 430</span>  <span class="comment">//finds min vcal</span></div>
<div class="line"><a name="l00431"></a><span class="lineno"> 431</span>  <span class="keywordtype">int</span> cnt(0); </div>
<div class="line"><a name="l00432"></a><span class="lineno"> 432</span>  <span class="keywordtype">bool</span> done(<span class="keyword">false</span>);</div>
<div class="line"><a name="l00433"></a><span class="lineno"> 433</span>  TH1D *h1(0); </div>
<div class="line"><a name="l00434"></a><span class="lineno"> 434</span>  vector<pair<uint8_t, vector<pixel> > > results;</div>
<div class="line"><a name="l00435"></a><span class="lineno"> 435</span>  pair<int, int> vcalmin;</div>
<div class="line"><a name="l00436"></a><span class="lineno"> 436</span>  <span class="keywordtype">int</span> vcalthr = 0;</div>
<div class="line"><a name="l00437"></a><span class="lineno"> 437</span>  h1 = <a class="code" href="classPixTest.html#a0cf34ffb1e6ffd691a4641c0f89b2bd5">bookTH1D</a>(<span class="stringliteral">"h1"</span>, <span class="stringliteral">"h1"</span>, 256, 0., 256.);</div>
<div class="line"><a name="l00438"></a><span class="lineno"> 438</span>  <span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> NRocs = rocIds.size();</div>
<div class="line"><a name="l00439"></a><span class="lineno"> 439</span>  <span class="keywordflow">for</span>(<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> roc_it = 0; roc_it < NRocs; roc_it++){</div>
<div class="line"><a name="l00440"></a><span class="lineno"> 440</span>  <span class="keywordflow">for</span>(<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> roc_kt = 0; roc_kt < NRocs; roc_kt++){</div>
<div class="line"><a name="l00441"></a><span class="lineno"> 441</span>  <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a3bbaa8cf5eb2bd76411e924952a2081e">_dut</a>-><a class="code" href="classpxar_1_1dut.html#a78937195ad0d6c985a28bcedda421213">setROCEnable</a>(roc_kt, <span class="keyword">true</span>);</div>
<div class="line"><a name="l00442"></a><span class="lineno"> 442</span>  }</div>
<div class="line"><a name="l00443"></a><span class="lineno"> 443</span>  <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a3bbaa8cf5eb2bd76411e924952a2081e">_dut</a>-><a class="code" href="classpxar_1_1dut.html#a79b4faf65b2296a4dda907ed3284e7ce">testAllPixels</a>(<span class="keyword">false</span>);</div>
<div class="line"><a name="l00444"></a><span class="lineno"> 444</span>  <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a3bbaa8cf5eb2bd76411e924952a2081e">_dut</a>-><a class="code" href="classpxar_1_1dut.html#a3547a151355a9920a706af71f472e65e">maskAllPixels</a>(<span class="keyword">true</span>);</div>
<div class="line"><a name="l00445"></a><span class="lineno"> 445</span>  <span class="comment">// fApi->_dut->setROCEnable(roc_it, true);</span></div>
<div class="line"><a name="l00446"></a><span class="lineno"> 446</span>  <span class="comment">// fApi->_dut->testPixel(minpixels[rocIds[roc_it]].column(), minpixels[rocIds[roc_it]].row(), true, rocIds[roc_it]);</span></div>
<div class="line"><a name="l00447"></a><span class="lineno"> 447</span>  <span class="comment">// fApi->_dut->maskPixel(minpixels[rocIds[roc_it]].column(), minpixels[rocIds[roc_it]].row(), false, rocIds[roc_it]);</span></div>
<div class="line"><a name="l00448"></a><span class="lineno"> 448</span>  <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a3bbaa8cf5eb2bd76411e924952a2081e">_dut</a>-><a class="code" href="classpxar_1_1dut.html#a08a6e724bd095b9142cf9c0701ca2a2d">testPixel</a>(minpixels[rocIds[roc_it]].column(), minpixels[rocIds[roc_it]].row(), <span class="keyword">true</span>);</div>
<div class="line"><a name="l00449"></a><span class="lineno"> 449</span>  <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a3bbaa8cf5eb2bd76411e924952a2081e">_dut</a>-><a class="code" href="classpxar_1_1dut.html#a668c62d77171f2842ff8623558d616a6">maskPixel</a>(minpixels[rocIds[roc_it]].column(), minpixels[rocIds[roc_it]].row(), <span class="keyword">false</span>);</div>
<div class="line"><a name="l00450"></a><span class="lineno"> 450</span>  LOG(logDEBUG)<<<span class="stringliteral">"enabling pixels "</span><<(int)minpixels[roc_it].column()<<<span class="stringliteral">", "</span><<(int)minpixels[roc_it].row()<<<span class="stringliteral">", "</span><<(int)minpixels[roc_it].roc()<<<span class="stringliteral">" "</span><<(int)roc_it;</div>
<div class="line"><a name="l00451"></a><span class="lineno"> 451</span>  <span class="keywordflow">for</span>(<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> roc_jt = 0; roc_jt < NRocs; roc_jt++){</div>
<div class="line"><a name="l00452"></a><span class="lineno"> 452</span>  <span class="keywordflow">if</span>(roc_jt!= roc_it){</div>
<div class="line"><a name="l00453"></a><span class="lineno"> 453</span>  <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a3bbaa8cf5eb2bd76411e924952a2081e">_dut</a>-><a class="code" href="classpxar_1_1dut.html#a78937195ad0d6c985a28bcedda421213">setROCEnable</a>(roc_jt, <span class="keyword">false</span>);</div>
<div class="line"><a name="l00454"></a><span class="lineno"> 454</span>  }</div>
<div class="line"><a name="l00455"></a><span class="lineno"> 455</span>  }</div>
<div class="line"><a name="l00456"></a><span class="lineno"> 456</span>  <span class="comment">// fApi->_dut->testPixel(minpixels[roc_it].column(), minpixels[roc_it].row(), true, getIdFromIdx((int)roc_it));</span></div>
<div class="line"><a name="l00457"></a><span class="lineno"> 457</span>  <span class="comment">//fApi->_dut->maskPixel(minpixels[roc_it].column(), minpixels[roc_it].row(), false, getIdFromIdx((int)roc_it));</span></div>
<div class="line"><a name="l00458"></a><span class="lineno"> 458</span>  <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a3bbaa8cf5eb2bd76411e924952a2081e">_dut</a>-><a class="code" href="classpxar_1_1dut.html#a806b8b7f97988bc9e68a14d9d4ecd642">info</a>();</div>
<div class="line"><a name="l00459"></a><span class="lineno"> 459</span>  cnt = 0; </div>
<div class="line"><a name="l00460"></a><span class="lineno"> 460</span>  done = <span class="keyword">false</span>;</div>
<div class="line"><a name="l00461"></a><span class="lineno"> 461</span>  <span class="keywordflow">while</span> (!done) {</div>
<div class="line"><a name="l00462"></a><span class="lineno"> 462</span>  <span class="keywordflow">try</span> {</div>
<div class="line"><a name="l00463"></a><span class="lineno"> 463</span>  <span class="comment">// LOG(logDEBUG)<<"trying phVsDAC for roc "<<(int)roc_it<<" "<<(int)rocIds[roc_it];</span></div>
<div class="line"><a name="l00464"></a><span class="lineno"> 464</span>  results = <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a71995f1d7d7500cc4f8a9203b3de197a">getPulseheightVsDAC</a>(<span class="stringliteral">"vcal"</span>, 0, 255, FLAG_FORCE_MASKED, 10);</div>
<div class="line"><a name="l00465"></a><span class="lineno"> 465</span>  <span class="comment">//LOG(logDEBUG)<<"worked? phVsDAC for roc "<<(int)roc_it<<" "<<(int)rocIds[roc_it];</span></div>
<div class="line"><a name="l00466"></a><span class="lineno"> 466</span>  done = <span class="keyword">true</span>;</div>
<div class="line"><a name="l00467"></a><span class="lineno"> 467</span>  } <span class="keywordflow">catch</span>(<a class="code" href="classpxar_1_1pxarException.html">pxarException</a> &e) {</div>
<div class="line"><a name="l00468"></a><span class="lineno"> 468</span>  LOG(logCRITICAL) << <span class="stringliteral">"pXar execption: "</span><< e.what(); </div>
<div class="line"><a name="l00469"></a><span class="lineno"> 469</span>  ++cnt;</div>
<div class="line"><a name="l00470"></a><span class="lineno"> 470</span>  }</div>
<div class="line"><a name="l00471"></a><span class="lineno"> 471</span>  done = (cnt>5) || done;</div>
<div class="line"><a name="l00472"></a><span class="lineno"> 472</span>  }</div>
<div class="line"><a name="l00473"></a><span class="lineno"> 473</span>  </div>
<div class="line"><a name="l00474"></a><span class="lineno"> 474</span>  LOG(logDEBUG)<<<span class="stringliteral">"size of results "</span><<results.size();</div>
<div class="line"><a name="l00475"></a><span class="lineno"> 475</span>  <span class="keywordflow">for</span> (<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> i = 0; i < results.size(); ++i) {</div>
<div class="line"><a name="l00476"></a><span class="lineno"> 476</span>  <span class="comment">// LOG(logDEBUG)<<"analyzing postion "<<int(i)<<" of results";</span></div>
<div class="line"><a name="l00477"></a><span class="lineno"> 477</span>  pair<uint8_t, vector<pixel> > v = results[i];</div>
<div class="line"><a name="l00478"></a><span class="lineno"> 478</span>  <span class="keywordtype">int</span> idac = v.first; </div>
<div class="line"><a name="l00479"></a><span class="lineno"> 479</span>  <span class="comment">// LOG(logDEBUG)<<"idac is "<<(int)idac;</span></div>
<div class="line"><a name="l00480"></a><span class="lineno"> 480</span>  vector<pixel> vpix = v.second;</div>
<div class="line"><a name="l00481"></a><span class="lineno"> 481</span>  <span class="comment">//LOG(logDEBUG)<<"vpix size is "<<vpix.size();</span></div>
<div class="line"><a name="l00482"></a><span class="lineno"> 482</span>  <span class="keywordflow">for</span> (<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> ipix = 0; ipix < vpix.size(); ++ipix) {</div>
<div class="line"><a name="l00483"></a><span class="lineno"> 483</span>  <span class="comment">// LOG(logDEBUG)<<"vcalmin loop: ipix = "<<ipix<<", dac = "<<idac<<", ph = "<<vpix[ipix].value();</span></div>
<div class="line"><a name="l00484"></a><span class="lineno"> 484</span>  h1->Fill(idac, vpix[ipix].value());</div>
<div class="line"><a name="l00485"></a><span class="lineno"> 485</span>  }</div>
<div class="line"><a name="l00486"></a><span class="lineno"> 486</span>  }</div>
<div class="line"><a name="l00487"></a><span class="lineno"> 487</span>  vcalthr = <span class="keyword">static_cast<</span><span class="keywordtype">int</span><span class="keyword">></span>( h1->GetBinCenter( h1->FindFirstBinAbove(1.) ) );</div>
<div class="line"><a name="l00488"></a><span class="lineno"> 488</span>  vcalmin = make_pair(roc_it, vcalthr);</div>
<div class="line"><a name="l00489"></a><span class="lineno"> 489</span>  minVcal.insert(vcalmin);</div>
<div class="line"><a name="l00490"></a><span class="lineno"> 490</span>  h1->Reset();</div>
<div class="line"><a name="l00491"></a><span class="lineno"> 491</span>  }</div>
<div class="line"><a name="l00492"></a><span class="lineno"> 492</span>  <span class="keywordflow">for</span>(<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> roc_kt = 0; roc_kt < NRocs; roc_kt++){</div>
<div class="line"><a name="l00493"></a><span class="lineno"> 493</span>  <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a3bbaa8cf5eb2bd76411e924952a2081e">_dut</a>-><a class="code" href="classpxar_1_1dut.html#a78937195ad0d6c985a28bcedda421213">setROCEnable</a>(roc_kt, <span class="keyword">false</span>);</div>
<div class="line"><a name="l00494"></a><span class="lineno"> 494</span>  }</div>
<div class="line"><a name="l00495"></a><span class="lineno"> 495</span>  <span class="keywordflow">for</span>(<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> roc_kt = 0; roc_kt < NRocs; roc_kt++){</div>
<div class="line"><a name="l00496"></a><span class="lineno"> 496</span>  <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a3bbaa8cf5eb2bd76411e924952a2081e">_dut</a>-><a class="code" href="classpxar_1_1dut.html#a78937195ad0d6c985a28bcedda421213">setROCEnable</a>(roc_kt, <span class="keyword">true</span>);</div>
<div class="line"><a name="l00497"></a><span class="lineno"> 497</span>  }</div>
<div class="line"><a name="l00498"></a><span class="lineno"> 498</span> }</div>
<div class="line"><a name="l00499"></a><span class="lineno"> 499</span> </div>
<div class="line"><a name="l00500"></a><span class="lineno"> 500</span> map<uint8_t, int> PixTestPhOptimization::InsideRangePH(map<uint8_t,int> &po_opt, std::vector< std::pair<uint8_t, std::pair<uint8_t, std::vector<pxar::pixel> > > > &dacdac_max, std::vector< std::pair<uint8_t, std::pair<uint8_t, std::vector<pxar::pixel> > > > &dacdac_min){</div>
<div class="line"><a name="l00501"></a><span class="lineno"> 501</span>  <span class="comment">//adjusting phscale so that the PH curve is fully inside the ADC range</span></div>
<div class="line"><a name="l00502"></a><span class="lineno"> 502</span>  map<uint8_t, int> ps_opt;</div>
<div class="line"><a name="l00503"></a><span class="lineno"> 503</span>  <span class="keywordtype">int</span> maxPh(0);</div>
<div class="line"><a name="l00504"></a><span class="lineno"> 504</span>  <span class="keywordtype">int</span> minPh(0);</div>
<div class="line"><a name="l00505"></a><span class="lineno"> 505</span>  <span class="keywordtype">bool</span> lowEd=<span class="keyword">false</span>, upEd=<span class="keyword">false</span>;</div>
<div class="line"><a name="l00506"></a><span class="lineno"> 506</span>  <span class="keywordtype">int</span> upEd_dist=255, lowEd_dist=255;</div>
<div class="line"><a name="l00507"></a><span class="lineno"> 507</span>  <span class="keywordtype">int</span> safetyMargin = 40;</div>
<div class="line"><a name="l00508"></a><span class="lineno"> 508</span>  <span class="keywordtype">int</span> dist = 255;</div>
<div class="line"><a name="l00509"></a><span class="lineno"> 509</span>  map<uint8_t, int> bestDist;</div>
<div class="line"><a name="l00510"></a><span class="lineno"> 510</span>  LOG(logDEBUG) << <span class="stringliteral">"dacdac at max vcal has size "</span><<dacdac_max.size()<<endl;</div>
<div class="line"><a name="l00511"></a><span class="lineno"> 511</span>  LOG(logDEBUG) << <span class="stringliteral">"dacdac at min vcal has size "</span><<dacdac_min.size()<<endl;</div>
<div class="line"><a name="l00512"></a><span class="lineno"> 512</span>  vector<uint8_t> rocIds = <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a3bbaa8cf5eb2bd76411e924952a2081e">_dut</a>-><a class="code" href="classpxar_1_1dut.html#a630bc382889766282de95bec85af766e">getEnabledRocIDs</a>(); </div>
<div class="line"><a name="l00513"></a><span class="lineno"> 513</span>  <span class="keywordflow">for</span>(<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> roc_it = 0; roc_it < rocIds.size(); roc_it++){</div>
<div class="line"><a name="l00514"></a><span class="lineno"> 514</span>  bestDist[rocIds[roc_it]] = 255;</div>
<div class="line"><a name="l00515"></a><span class="lineno"> 515</span>  LOG(logDEBUG)<<<span class="stringliteral">"Bestdist at roc_it "</span><<roc_it<<<span class="stringliteral">" initialized with "</span><<bestDist[roc_it]<<<span class="stringliteral">" "</span><<bestDist[rocIds[roc_it]];</div>
<div class="line"><a name="l00516"></a><span class="lineno"> 516</span>  ps_opt[rocIds[roc_it]] = 999;</div>
<div class="line"><a name="l00517"></a><span class="lineno"> 517</span>  }</div>
<div class="line"><a name="l00518"></a><span class="lineno"> 518</span>  std::vector< std::pair<uint8_t, std::pair<uint8_t, std::vector<pxar::pixel> > > >::iterator dacit_max = dacdac_max.begin();</div>
<div class="line"><a name="l00519"></a><span class="lineno"> 519</span>  std::vector< std::pair<uint8_t, std::pair<uint8_t, std::vector<pxar::pixel> > > >::iterator dacit_min = dacdac_min.begin();</div>
<div class="line"><a name="l00520"></a><span class="lineno"> 520</span> <span class="comment">// for(dacit_max = dacdac_max.begin(); dacit_max != dacdac_max.end(); dacit_max++){</span></div>
<div class="line"><a name="l00521"></a><span class="lineno"> 521</span> <span class="comment">// for(int pixit = 0; pixit < dacit_max->second.second.size(); pixit++){</span></div>
<div class="line"><a name="l00522"></a><span class="lineno"> 522</span> <span class="comment">// LOG(logDEBUG)<<"dacit_max: pixel "<<(int)dacit_max->second.second[pixit].roc()<<", "<<(int)dacit_max->second.second[pixit].column()<<", "<<(int)dacit_max->second.second[pixit].row()<<", ph offset "<<(int)dacit_max->first<<", ph scale "<<(int)dacit_max->second.first<<", max ph "<<(int)dacit_max->second.second[pixit].value();</span></div>
<div class="line"><a name="l00523"></a><span class="lineno"> 523</span> <span class="comment">// LOG(logDEBUG)<<"dacit_min: pixel "<<(int)dacit_min->second.second[pixit].roc()<<", "<<(int)dacit_min->second.second[pixit].column()<<", "<<(int)dacit_min->second.second[pixit].row()<<", ph offset "<<(int)dacit_min->first<<", ph scale "<<(int)dacit_min->second.first<<", min ph "<<(int)dacit_min->second.second[pixit].value();</span></div>
<div class="line"><a name="l00524"></a><span class="lineno"> 524</span> <span class="comment">// }</span></div>
<div class="line"><a name="l00525"></a><span class="lineno"> 525</span> <span class="comment">// dacit_min++;</span></div>
<div class="line"><a name="l00526"></a><span class="lineno"> 526</span> <span class="comment">// }</span></div>
<div class="line"><a name="l00527"></a><span class="lineno"> 527</span>  <span class="keywordtype">int</span> pixsize_max=0;</div>
<div class="line"><a name="l00528"></a><span class="lineno"> 528</span>  <span class="keywordtype">int</span> pixsize_min=0;</div>
<div class="line"><a name="l00529"></a><span class="lineno"> 529</span>  LOG(logDEBUG)<<<span class="stringliteral">"InsideRange() subtest"</span>;</div>
<div class="line"><a name="l00530"></a><span class="lineno"> 530</span>  <span class="keywordflow">for</span>(<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> roc_it = 0; roc_it < rocIds.size(); roc_it++){</div>
<div class="line"><a name="l00531"></a><span class="lineno"> 531</span>  <span class="keywordflow">for</span>(dacit_max = dacdac_max.begin(); dacit_max != dacdac_max.end(); dacit_max++){</div>
<div class="line"><a name="l00532"></a><span class="lineno"> 532</span>  <span class="keywordflow">if</span>(dacit_max->first == po_opt[rocIds[roc_it]]){</div>
<div class="line"><a name="l00533"></a><span class="lineno"> 533</span>  <span class="keywordflow">for</span>(dacit_min = dacdac_min.begin(); dacit_min != dacdac_min.end(); dacit_min++)</div>
<div class="line"><a name="l00534"></a><span class="lineno"> 534</span>  <span class="keywordflow">if</span>(dacit_min->first == po_opt[rocIds[roc_it]] && dacit_min->second.first == dacit_max->second.first){</div>
<div class="line"><a name="l00535"></a><span class="lineno"> 535</span>  pixsize_max = dacit_max->second.second.size();</div>
<div class="line"><a name="l00536"></a><span class="lineno"> 536</span>  pixsize_min = dacit_min->second.second.size();</div>
<div class="line"><a name="l00537"></a><span class="lineno"> 537</span>  <span class="keywordflow">for</span>(<span class="keywordtype">int</span> pix=0; pix < pixsize_max; pix++){</div>
<div class="line"><a name="l00538"></a><span class="lineno"> 538</span>  <span class="keywordflow">if</span>((dacit_max->second.second[pix].roc()!=rocIds[roc_it] || dacit_min->second.second[pix].roc()!=rocIds[roc_it]) && dacit_max->second.second[pix].roc() != dacit_min->second.second[pix].roc()){</div>
<div class="line"><a name="l00539"></a><span class="lineno"> 539</span>  <span class="comment">// LOG(logDEBUG)<<"####//// this time roc ids DO NOT match "<<(int)dacit_min->second.second[pix].roc()<<" "<<(int)dacit_max->second.second[pix].roc()<<" "<<(int)rocIds[roc_it]<<" "<<(int)roc_it<<" ////####";</span></div>
<div class="line"><a name="l00540"></a><span class="lineno"> 540</span>  <span class="keywordflow">continue</span>;</div>
<div class="line"><a name="l00541"></a><span class="lineno"> 541</span>  }</div>
<div class="line"><a name="l00542"></a><span class="lineno"> 542</span>  <span class="comment">//LOG(logDEBUG)<<"####//// this time roc ids match "<<(int)rocIds[roc_it]<<" "<<(int)roc_it<<" ////####";</span></div>
<div class="line"><a name="l00543"></a><span class="lineno"> 543</span>  maxPh=dacit_max->second.second[pix].value();</div>
<div class="line"><a name="l00544"></a><span class="lineno"> 544</span>  minPh=dacit_min->second.second[pix].value();</div>
<div class="line"><a name="l00545"></a><span class="lineno"> 545</span>  <span class="keywordflow">if</span>(dacit_max->second.second[pix].roc() != dacit_min->second.second[pix].roc()){</div>
<div class="line"><a name="l00546"></a><span class="lineno"> 546</span>  LOG(logDEBUG) << <span class="stringliteral">"InsideRangePH: ROC ids do not correspond"</span>;</div>
<div class="line"><a name="l00547"></a><span class="lineno"> 547</span>  }</div>
<div class="line"><a name="l00548"></a><span class="lineno"> 548</span>  lowEd = (minPh > safetyMargin);</div>
<div class="line"><a name="l00549"></a><span class="lineno"> 549</span>  upEd = (maxPh < 255 - safetyMargin);</div>
<div class="line"><a name="l00550"></a><span class="lineno"> 550</span>  lowEd_dist = abs(minPh - safetyMargin);</div>
<div class="line"><a name="l00551"></a><span class="lineno"> 551</span>  upEd_dist = abs(maxPh - (255 - safetyMargin));</div>
<div class="line"><a name="l00552"></a><span class="lineno"> 552</span>  dist = (upEd_dist > lowEd_dist ) ? (upEd_dist) : (lowEd_dist);</div>
<div class="line"><a name="l00553"></a><span class="lineno"> 553</span>  <span class="keywordflow">if</span>(dist < bestDist[dacit_max->second.second[pix].roc()] && upEd && lowEd){</div>
<div class="line"><a name="l00554"></a><span class="lineno"> 554</span>  LOG(logDEBUG)<<<span class="stringliteral">"New distance "</span><<dist<<<span class="stringliteral">" is smaller than previous bestDist "</span><<bestDist[dacit_max->second.second[pix].roc()]<<<span class="stringliteral">" and edges are ok, so... "</span>;</div>
<div class="line"><a name="l00555"></a><span class="lineno"> 555</span>  ps_opt[dacit_max->second.second[pix].roc()] = dacit_max->second.first;</div>
<div class="line"><a name="l00556"></a><span class="lineno"> 556</span>  bestDist[dacit_max->second.second[pix].roc()]=dist;</div>
<div class="line"><a name="l00557"></a><span class="lineno"> 557</span>  LOG(logDEBUG)<<<span class="stringliteral">"... new bestDist is "</span><<bestDist[dacit_max->second.second[pix].roc()]<<<span class="stringliteral">" for ps_opt = "</span><<ps_opt[dacit_max->second.second[pix].roc()];</div>
<div class="line"><a name="l00558"></a><span class="lineno"> 558</span>  }</div>
<div class="line"><a name="l00559"></a><span class="lineno"> 559</span>  }</div>
<div class="line"><a name="l00560"></a><span class="lineno"> 560</span>  }</div>
<div class="line"><a name="l00561"></a><span class="lineno"> 561</span>  }</div>
<div class="line"><a name="l00562"></a><span class="lineno"> 562</span>  }</div>
<div class="line"><a name="l00563"></a><span class="lineno"> 563</span>  }</div>
<div class="line"><a name="l00564"></a><span class="lineno"> 564</span>  </div>
<div class="line"><a name="l00565"></a><span class="lineno"> 565</span>  <span class="keywordflow">for</span>(<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> roc_it = 0; roc_it < rocIds.size(); roc_it++){</div>
<div class="line"><a name="l00566"></a><span class="lineno"> 566</span>  LOG(logDEBUG)<<<span class="stringliteral">"opt step 1: po fixed to"</span><<po_opt[rocIds[roc_it]]<<<span class="stringliteral">" and scale adjusted to "</span><<ps_opt[rocIds[roc_it]]<<<span class="stringliteral">" for ROC "</span><<(int)rocIds[roc_it]<<<span class="stringliteral">", with distance "</span><<bestDist[rocIds[roc_it]];</div>
<div class="line"><a name="l00567"></a><span class="lineno"> 567</span>  }</div>
<div class="line"><a name="l00568"></a><span class="lineno"> 568</span>  <span class="keywordflow">return</span> ps_opt;</div>
<div class="line"><a name="l00569"></a><span class="lineno"> 569</span> }</div>
<div class="line"><a name="l00570"></a><span class="lineno"> 570</span> </div>
<div class="line"><a name="l00571"></a><span class="lineno"> 571</span> map<uint8_t, int> PixTestPhOptimization::CentrePhRange(map<uint8_t, int> &po_opt, map<uint8_t, int> &ps_opt, std::vector< std::pair<uint8_t, std::pair<uint8_t, std::vector<pxar::pixel> > > > &dacdac_max, std::vector< std::pair<uint8_t, std::pair<uint8_t, std::vector<pxar::pixel> > > > &dacdac_min){</div>
<div class="line"><a name="l00572"></a><span class="lineno"> 572</span>  <span class="comment">//centring PH curve adjusting phoffset </span></div>
<div class="line"><a name="l00573"></a><span class="lineno"> 573</span>  LOG(logDEBUG)<<<span class="stringliteral">"Welcome to CentrePhRange()"</span>; </div>
<div class="line"><a name="l00574"></a><span class="lineno"> 574</span>  <span class="keywordtype">int</span> maxPh(0);</div>
<div class="line"><a name="l00575"></a><span class="lineno"> 575</span>  <span class="keywordtype">int</span> minPh(0);</div>
<div class="line"><a name="l00576"></a><span class="lineno"> 576</span>  <span class="keywordtype">int</span> dist = 255;</div>
<div class="line"><a name="l00577"></a><span class="lineno"> 577</span>  map<uint8_t, int> bestDist;</div>
<div class="line"><a name="l00578"></a><span class="lineno"> 578</span>  vector<uint8_t> rocIds = <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a3bbaa8cf5eb2bd76411e924952a2081e">_dut</a>-><a class="code" href="classpxar_1_1dut.html#a630bc382889766282de95bec85af766e">getEnabledRocIDs</a>(); </div>
<div class="line"><a name="l00579"></a><span class="lineno"> 579</span>  <span class="keywordflow">for</span>(<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> roc_it = 0; roc_it < rocIds.size(); roc_it++){</div>
<div class="line"><a name="l00580"></a><span class="lineno"> 580</span>  bestDist[rocIds[roc_it]] = 255;</div>
<div class="line"><a name="l00581"></a><span class="lineno"> 581</span>  }</div>
<div class="line"><a name="l00582"></a><span class="lineno"> 582</span>  std::vector< std::pair<uint8_t, std::pair<uint8_t, std::vector<pxar::pixel> > > >::iterator dacit_max = dacdac_max.begin();</div>
<div class="line"><a name="l00583"></a><span class="lineno"> 583</span>  std::vector< std::pair<uint8_t, std::pair<uint8_t, std::vector<pxar::pixel> > > >::iterator dacit_min = dacdac_min.begin();</div>
<div class="line"><a name="l00584"></a><span class="lineno"> 584</span>  <span class="keywordtype">int</span> pixsize_max=0;</div>
<div class="line"><a name="l00585"></a><span class="lineno"> 585</span>  <span class="keywordtype">int</span> pixsize_min=0;</div>
<div class="line"><a name="l00586"></a><span class="lineno"> 586</span>  <span class="keywordflow">for</span>(<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> roc_it = 0; roc_it < rocIds.size(); roc_it++){</div>
<div class="line"><a name="l00587"></a><span class="lineno"> 587</span>  dist = 255;</div>
<div class="line"><a name="l00588"></a><span class="lineno"> 588</span>  <span class="keywordflow">for</span>(dacit_max = dacdac_max.begin(); dacit_max != dacdac_max.end(); dacit_max++){</div>
<div class="line"><a name="l00589"></a><span class="lineno"> 589</span>  <span class="keywordflow">if</span>(dacit_max->second.first != ps_opt[rocIds[roc_it]])<span class="keywordflow">continue</span>;</div>
<div class="line"><a name="l00590"></a><span class="lineno"> 590</span>  <span class="keywordflow">for</span>(dacit_min = dacdac_min.begin(); dacit_min != dacdac_min.end(); dacit_min++){</div>
<div class="line"><a name="l00591"></a><span class="lineno"> 591</span>  <span class="keywordflow">if</span>(dacit_min->second.first == ps_opt[rocIds[roc_it]] && dacit_min->first == dacit_max->first){</div>
<div class="line"><a name="l00592"></a><span class="lineno"> 592</span>  pixsize_max = dacit_max->second.second.size();</div>
<div class="line"><a name="l00593"></a><span class="lineno"> 593</span>  pixsize_min = dacit_min->second.second.size();</div>
<div class="line"><a name="l00594"></a><span class="lineno"> 594</span>  <span class="keywordflow">for</span>(<span class="keywordtype">int</span> pix=0; pix < pixsize_max; pix++){</div>
<div class="line"><a name="l00595"></a><span class="lineno"> 595</span>  <span class="keywordflow">if</span>(dacit_max->second.second[pix].roc()!=rocIds[roc_it] || dacit_min->second.second[pix].roc()!=rocIds[roc_it]) <span class="keywordflow">continue</span>;</div>
<div class="line"><a name="l00596"></a><span class="lineno"> 596</span>  maxPh=dacit_max->second.second[pix].value();</div>
<div class="line"><a name="l00597"></a><span class="lineno"> 597</span>  minPh=dacit_min->second.second[pix].value();</div>
<div class="line"><a name="l00598"></a><span class="lineno"> 598</span>  <span class="keywordflow">if</span>(dacit_max->second.second[pix].roc() != dacit_min->second.second[pix].roc()){</div>
<div class="line"><a name="l00599"></a><span class="lineno"> 599</span>  LOG(logDEBUG) << <span class="stringliteral">"CentrePhRange: ROC ids do not correspond"</span>;</div>
<div class="line"><a name="l00600"></a><span class="lineno"> 600</span>  }</div>
<div class="line"><a name="l00601"></a><span class="lineno"> 601</span>  dist = abs(minPh - (255 - maxPh));</div>
<div class="line"><a name="l00602"></a><span class="lineno"> 602</span>  <span class="keywordflow">if</span> (dist < bestDist[dacit_max->second.second[pix].roc()]){</div>
<div class="line"><a name="l00603"></a><span class="lineno"> 603</span>  po_opt[dacit_max->second.second[pix].roc()] = dacit_max->first;</div>
<div class="line"><a name="l00604"></a><span class="lineno"> 604</span>  bestDist[dacit_max->second.second[pix].roc()] = dist;</div>
<div class="line"><a name="l00605"></a><span class="lineno"> 605</span>  } </div>
<div class="line"><a name="l00606"></a><span class="lineno"> 606</span>  }</div>
<div class="line"><a name="l00607"></a><span class="lineno"> 607</span>  }</div>
<div class="line"><a name="l00608"></a><span class="lineno"> 608</span>  }</div>
<div class="line"><a name="l00609"></a><span class="lineno"> 609</span>  }</div>
<div class="line"><a name="l00610"></a><span class="lineno"> 610</span>  }</div>
<div class="line"><a name="l00611"></a><span class="lineno"> 611</span>  <span class="keywordflow">for</span>(<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> roc_it = 0; roc_it < rocIds.size(); roc_it++){</div>
<div class="line"><a name="l00612"></a><span class="lineno"> 612</span>  LOG(logDEBUG)<<<span class="stringliteral">"opt centring step: po "</span><<po_opt[rocIds[roc_it]]<<<span class="stringliteral">" and scale "</span><<ps_opt[rocIds[roc_it]]<<<span class="stringliteral">", with distance "</span><<bestDist[rocIds[roc_it]]<<<span class="stringliteral">" on ROC "</span><<(int)rocIds[roc_it];</div>
<div class="line"><a name="l00613"></a><span class="lineno"> 613</span>  }</div>
<div class="line"><a name="l00614"></a><span class="lineno"> 614</span>  <span class="keywordflow">return</span> po_opt;</div>
<div class="line"><a name="l00615"></a><span class="lineno"> 615</span> }</div>
<div class="line"><a name="l00616"></a><span class="lineno"> 616</span> </div>
<div class="line"><a name="l00617"></a><span class="lineno"> 617</span> map<uint8_t, int> PixTestPhOptimization::StretchPH(map<uint8_t, int> &po_opt, map<uint8_t, int> &ps_opt, std::vector< std::pair<uint8_t, std::pair<uint8_t, std::vector<pxar::pixel> > > > &dacdac_max, std::vector< std::pair<uint8_t, std::pair<uint8_t, std::vector<pxar::pixel> > > > &dacdac_min){</div>
<div class="line"><a name="l00618"></a><span class="lineno"> 618</span>  <span class="comment">//stretching PH curve to exploit the full ADC range, adjusting phscale </span></div>
<div class="line"><a name="l00619"></a><span class="lineno"> 619</span>  <span class="keywordtype">int</span> maxPh(0);</div>
<div class="line"><a name="l00620"></a><span class="lineno"> 620</span>  <span class="keywordtype">int</span> minPh(0);</div>
<div class="line"><a name="l00621"></a><span class="lineno"> 621</span>  <span class="keywordtype">bool</span> lowEd=<span class="keyword">false</span>, upEd=<span class="keyword">false</span>;</div>
<div class="line"><a name="l00622"></a><span class="lineno"> 622</span>  <span class="keywordtype">int</span> upEd_dist=255, lowEd_dist=255;</div>
<div class="line"><a name="l00623"></a><span class="lineno"> 623</span>  <span class="keywordtype">int</span> safetyMarginUp = fSafetyMarginUp;</div>
<div class="line"><a name="l00624"></a><span class="lineno"> 624</span>  <span class="keywordtype">int</span> safetyMarginLow = fSafetyMarginLow;</div>
<div class="line"><a name="l00625"></a><span class="lineno"> 625</span>  LOG(logDEBUG)<<<span class="stringliteral">"safety margin for stretching set to "</span><<fSafetyMarginLow<<<span class="stringliteral">" (lower edge) and "</span><<fSafetyMarginUp<<<span class="stringliteral">"(upper edge)"</span>;</div>
<div class="line"><a name="l00626"></a><span class="lineno"> 626</span>  <span class="keywordtype">int</span> dist = 255;</div>
<div class="line"><a name="l00627"></a><span class="lineno"> 627</span>  map<uint8_t, int> bestDist;</div>
<div class="line"><a name="l00628"></a><span class="lineno"> 628</span>  vector<uint8_t> rocIds = <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a3bbaa8cf5eb2bd76411e924952a2081e">_dut</a>-><a class="code" href="classpxar_1_1dut.html#a630bc382889766282de95bec85af766e">getEnabledRocIDs</a>();</div>
<div class="line"><a name="l00629"></a><span class="lineno"> 629</span>  <span class="keywordflow">for</span>(<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> roc_it = 0; roc_it < rocIds.size(); roc_it++){</div>
<div class="line"><a name="l00630"></a><span class="lineno"> 630</span>  bestDist[rocIds[roc_it]] = 255;</div>
<div class="line"><a name="l00631"></a><span class="lineno"> 631</span>  }</div>
<div class="line"><a name="l00632"></a><span class="lineno"> 632</span>  std::vector< std::pair<uint8_t, std::pair<uint8_t, std::vector<pxar::pixel> > > >::iterator dacit_max = dacdac_max.begin();</div>
<div class="line"><a name="l00633"></a><span class="lineno"> 633</span>  std::vector< std::pair<uint8_t, std::pair<uint8_t, std::vector<pxar::pixel> > > >::iterator dacit_min = dacdac_min.begin();</div>
<div class="line"><a name="l00634"></a><span class="lineno"> 634</span>  <span class="keywordflow">while</span>(dacit_max != dacdac_max.end() || dacit_min != dacdac_min.end()){</div>
<div class="line"><a name="l00635"></a><span class="lineno"> 635</span>  <span class="keywordflow">for</span>(<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> pix=0; pix < dacit_min->second.second.size() && pix < dacit_max->second.second.size(); pix++){</div>
<div class="line"><a name="l00636"></a><span class="lineno"> 636</span>  <span class="keywordflow">if</span>(dacit_max->first == po_opt[dacit_max->second.second[pix].roc()] && dacit_min->first == po_opt[dacit_min->second.second[pix].roc()]){</div>
<div class="line"><a name="l00637"></a><span class="lineno"> 637</span>  maxPh=dacit_max->second.second[pix].value();</div>
<div class="line"><a name="l00638"></a><span class="lineno"> 638</span>  minPh=dacit_min->second.second[pix].value();</div>
<div class="line"><a name="l00639"></a><span class="lineno"> 639</span>  <span class="keywordflow">if</span>(dacit_max->second.second[pix].roc() != dacit_min->second.second[pix].roc()){</div>
<div class="line"><a name="l00640"></a><span class="lineno"> 640</span>  LOG(logDEBUG) << <span class="stringliteral">"CentrePhRange: ROC ids do not correspond"</span>;</div>
<div class="line"><a name="l00641"></a><span class="lineno"> 641</span>  }</div>
<div class="line"><a name="l00642"></a><span class="lineno"> 642</span>  lowEd = (minPh > safetyMarginLow);</div>
<div class="line"><a name="l00643"></a><span class="lineno"> 643</span>  upEd = (maxPh < 255 - safetyMarginUp);</div>
<div class="line"><a name="l00644"></a><span class="lineno"> 644</span>  upEd_dist = abs(maxPh - (255 - safetyMarginUp));</div>
<div class="line"><a name="l00645"></a><span class="lineno"> 645</span>  lowEd_dist = abs(minPh - safetyMarginLow);</div>
<div class="line"><a name="l00646"></a><span class="lineno"> 646</span>  dist = (upEd_dist < lowEd_dist ) ? (upEd_dist) : (lowEd_dist);</div>
<div class="line"><a name="l00647"></a><span class="lineno"> 647</span>  <span class="keywordflow">if</span>(dist < bestDist[dacit_max->second.second[pix].roc()] && lowEd && upEd){</div>
<div class="line"><a name="l00648"></a><span class="lineno"> 648</span>  ps_opt[dacit_max->second.second[pix].roc()] = dacit_max->second.first;</div>
<div class="line"><a name="l00649"></a><span class="lineno"> 649</span>  bestDist[dacit_max->second.second[pix].roc()]=dist;</div>
<div class="line"><a name="l00650"></a><span class="lineno"> 650</span>  }</div>
<div class="line"><a name="l00651"></a><span class="lineno"> 651</span>  }</div>
<div class="line"><a name="l00652"></a><span class="lineno"> 652</span>  }</div>
<div class="line"><a name="l00653"></a><span class="lineno"> 653</span>  dacit_max++;</div>
<div class="line"><a name="l00654"></a><span class="lineno"> 654</span>  dacit_min++;</div>
<div class="line"><a name="l00655"></a><span class="lineno"> 655</span>  }</div>
<div class="line"><a name="l00656"></a><span class="lineno"> 656</span>  <span class="keywordflow">for</span>(<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> roc_it = 0; roc_it < rocIds.size(); roc_it++){</div>
<div class="line"><a name="l00657"></a><span class="lineno"> 657</span>  LOG(logDEBUG)<<<span class="stringliteral">"opt final step: po fixed to"</span><<po_opt[rocIds[roc_it]]<<<span class="stringliteral">" and scale adjusted to "</span><<ps_opt[rocIds[roc_it]]<<<span class="stringliteral">", with distance "</span><<bestDist[rocIds[roc_it]]<<<span class="stringliteral">" on ROC "</span><<(int)rocIds[roc_it];</div>
<div class="line"><a name="l00658"></a><span class="lineno"> 658</span>  }</div>
<div class="line"><a name="l00659"></a><span class="lineno"> 659</span>  <span class="keywordflow">return</span> ps_opt;</div>
<div class="line"><a name="l00660"></a><span class="lineno"> 660</span> }</div>
<div class="line"><a name="l00661"></a><span class="lineno"> 661</span> </div>
<div class="line"><a name="l00662"></a><span class="lineno"> 662</span> <span class="keywordtype">void</span> PixTestPhOptimization::DrawPhMaps(std::map<int, int> &minVcal, std::vector<std::pair<uint8_t, std::pair<int, int> > > &badPixels){</div>
<div class="line"><a name="l00663"></a><span class="lineno"> 663</span>  vector<uint8_t> rocIds = <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a3bbaa8cf5eb2bd76411e924952a2081e">_dut</a>-><a class="code" href="classpxar_1_1dut.html#a630bc382889766282de95bec85af766e">getEnabledRocIDs</a>();</div>
<div class="line"><a name="l00664"></a><span class="lineno"> 664</span>  <span class="keywordtype">string</span> name, title;</div>
<div class="line"><a name="l00665"></a><span class="lineno"> 665</span>  <span class="comment">//draw PH maps and extract validation distributions from them</span></div>
<div class="line"><a name="l00666"></a><span class="lineno"> 666</span>  <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a3bbaa8cf5eb2bd76411e924952a2081e">_dut</a>-><a class="code" href="classpxar_1_1dut.html#a79b4faf65b2296a4dda907ed3284e7ce">testAllPixels</a>(<span class="keyword">true</span>);</div>
<div class="line"><a name="l00667"></a><span class="lineno"> 667</span>  <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a3bbaa8cf5eb2bd76411e924952a2081e">_dut</a>-><a class="code" href="classpxar_1_1dut.html#a3547a151355a9920a706af71f472e65e">maskAllPixels</a>(<span class="keyword">false</span>);</div>
<div class="line"><a name="l00668"></a><span class="lineno"> 668</span>  </div>
<div class="line"><a name="l00669"></a><span class="lineno"> 669</span>  std::vector<pxar::pixel> result_map;</div>
<div class="line"><a name="l00670"></a><span class="lineno"> 670</span>  map<int, TH2D* > h2_PhMaps;</div>
<div class="line"><a name="l00671"></a><span class="lineno"> 671</span>  map<int, TH1D* > h1_PhMaps;</div>
<div class="line"><a name="l00672"></a><span class="lineno"> 672</span>  TH2D* h2_PhMap(0);</div>
<div class="line"><a name="l00673"></a><span class="lineno"> 673</span>  TH1D* h1_PhMap(0);</div>
<div class="line"><a name="l00674"></a><span class="lineno"> 674</span>  <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a13fad3782f3cd2f76acd6d9ae84e72d1">setDAC</a>(<span class="stringliteral">"ctrlreg"</span>,4);</div>
<div class="line"><a name="l00675"></a><span class="lineno"> 675</span>  <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a13fad3782f3cd2f76acd6d9ae84e72d1">setDAC</a>(<span class="stringliteral">"vcal"</span>,255);</div>
<div class="line"><a name="l00676"></a><span class="lineno"> 676</span>  <span class="comment">//pulseheight map at vcal=255</span></div>
<div class="line"><a name="l00677"></a><span class="lineno"> 677</span>  result_map = <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a9de11051f5c0babffd3cdef948853012">getPulseheightMap</a>(0,10);</div>
<div class="line"><a name="l00678"></a><span class="lineno"> 678</span>  <span class="comment">//unpacking data from map and filling one histo per ROC</span></div>
<div class="line"><a name="l00679"></a><span class="lineno"> 679</span>  <span class="keywordflow">for</span>(<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> roc_it = 0; roc_it < rocIds.size(); roc_it++){</div>
<div class="line"><a name="l00680"></a><span class="lineno"> 680</span>  name = Form(<span class="stringliteral">"PH_mapHiVcal_C%d"</span>, rocIds[roc_it]);</div>
<div class="line"><a name="l00681"></a><span class="lineno"> 681</span>  title = Form(<span class="stringliteral">"PH_mapHiVcal_C%d"</span>, rocIds[roc_it]);</div>
<div class="line"><a name="l00682"></a><span class="lineno"> 682</span>  h2_PhMap = <a class="code" href="classPixTest.html#a3b750717cd1214f10ed1582ee3ce1052">bookTH2D</a>(name, name, 52, 0., 52., 80, 0., 80.);</div>
<div class="line"><a name="l00683"></a><span class="lineno"> 683</span>  h2_PhMaps.insert(make_pair(rocIds[roc_it], h2_PhMap));</div>
<div class="line"><a name="l00684"></a><span class="lineno"> 684</span>  <a class="code" href="classPixTest.html#adbd070a27e5299a4f2b80b948fbee131">fHistList</a>.push_back(h2_PhMaps[rocIds[roc_it]]); </div>
<div class="line"><a name="l00685"></a><span class="lineno"> 685</span>  <a class="code" href="classPixTest.html#a7a5f2a44bd4582a276fe6ebdce7b8582">fHistOptions</a>.insert( make_pair(h2_PhMaps[rocIds[roc_it]], <span class="stringliteral">"colz"</span>) ); </div>
<div class="line"><a name="l00686"></a><span class="lineno"> 686</span>  }</div>
<div class="line"><a name="l00687"></a><span class="lineno"> 687</span>  <span class="keywordflow">for</span> (<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> i = 0; i < result_map.size(); ++i) {</div>
<div class="line"><a name="l00688"></a><span class="lineno"> 688</span>  h2_PhMaps[ (int) result_map[i].roc() ]->Fill( result_map[i].column(), result_map[i].row(), result_map[i].value());</div>
<div class="line"><a name="l00689"></a><span class="lineno"> 689</span>  }</div>
<div class="line"><a name="l00690"></a><span class="lineno"> 690</span>  <span class="comment">//adjust z axis range and extract ph distribution</span></div>
<div class="line"><a name="l00691"></a><span class="lineno"> 691</span>  <span class="keywordflow">for</span>(<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> roc_it = 0; roc_it < rocIds.size(); roc_it++){</div>
<div class="line"><a name="l00692"></a><span class="lineno"> 692</span>  h2_PhMaps[ (int) rocIds[roc_it] ]->GetZaxis()->SetRangeUser(h2_PhMaps[ (<span class="keywordtype">int</span>) rocIds[roc_it] ]->GetMinimum(), 255. );</div>
<div class="line"><a name="l00693"></a><span class="lineno"> 693</span>  h1_PhMap = <a class="code" href="classPixTest.html#a3a43a68de3981f08a12d4d3c56028b77">distribution</a>( h2_PhMaps[ (<span class="keywordtype">int</span>) rocIds[roc_it] ], 255, 0., 255.);</div>
<div class="line"><a name="l00694"></a><span class="lineno"> 694</span>  h1_PhMaps.insert( make_pair(rocIds[roc_it], h1_PhMap) );</div>
<div class="line"><a name="l00695"></a><span class="lineno"> 695</span>  <a class="code" href="classPixTest.html#adbd070a27e5299a4f2b80b948fbee131">fHistList</a>.push_back(h1_PhMaps[rocIds[roc_it]]); </div>
<div class="line"><a name="l00696"></a><span class="lineno"> 696</span>  }</div>
<div class="line"><a name="l00697"></a><span class="lineno"> 697</span>  </div>
<div class="line"><a name="l00698"></a><span class="lineno"> 698</span>  <span class="comment">//PH map for lower vcal sampling point</span></div>
<div class="line"><a name="l00699"></a><span class="lineno"> 699</span>  <span class="keywordflow">for</span>(<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> roc_it = 0; roc_it < rocIds.size(); roc_it++){</div>
<div class="line"><a name="l00700"></a><span class="lineno"> 700</span>  <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a13fad3782f3cd2f76acd6d9ae84e72d1">setDAC</a>(<span class="stringliteral">"ctrlreg"</span>,0);</div>
<div class="line"><a name="l00701"></a><span class="lineno"> 701</span>  <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a13fad3782f3cd2f76acd6d9ae84e72d1">setDAC</a>(<span class="stringliteral">"vcal"</span>,minVcal[roc_it]+10, rocIds[roc_it] );</div>
<div class="line"><a name="l00702"></a><span class="lineno"> 702</span>  }</div>
<div class="line"><a name="l00703"></a><span class="lineno"> 703</span>  map<int, TH2D* > h2_PhMapsMin;</div>
<div class="line"><a name="l00704"></a><span class="lineno"> 704</span>  map<int, TH1D* > h1_PhMapsMin;</div>
<div class="line"><a name="l00705"></a><span class="lineno"> 705</span>  <span class="comment">//phmap</span></div>
<div class="line"><a name="l00706"></a><span class="lineno"> 706</span>  result_map = <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a9de11051f5c0babffd3cdef948853012">getPulseheightMap</a>(0,10);</div>
<div class="line"><a name="l00707"></a><span class="lineno"> 707</span>  <span class="comment">//unpacking data from map and filling one histo per ROC</span></div>
<div class="line"><a name="l00708"></a><span class="lineno"> 708</span>  <span class="keywordflow">for</span>(<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> roc_it = 0; roc_it < rocIds.size(); roc_it++){</div>
<div class="line"><a name="l00709"></a><span class="lineno"> 709</span>  name = Form(<span class="stringliteral">"PH_mapLowVcal_C%d"</span>, rocIds[roc_it]);</div>
<div class="line"><a name="l00710"></a><span class="lineno"> 710</span>  title = Form(<span class="stringliteral">"PH_mapLowVcal_C%d"</span>, rocIds[roc_it]);</div>
<div class="line"><a name="l00711"></a><span class="lineno"> 711</span>  h2_PhMap = <a class="code" href="classPixTest.html#a3b750717cd1214f10ed1582ee3ce1052">bookTH2D</a>(name, name, 52, 0., 52., 80, 0., 80.);</div>
<div class="line"><a name="l00712"></a><span class="lineno"> 712</span>  h2_PhMapsMin.insert(make_pair(rocIds[roc_it], h2_PhMap));</div>
<div class="line"><a name="l00713"></a><span class="lineno"> 713</span>  <a class="code" href="classPixTest.html#adbd070a27e5299a4f2b80b948fbee131">fHistList</a>.push_back(h2_PhMapsMin[rocIds[roc_it]]); </div>
<div class="line"><a name="l00714"></a><span class="lineno"> 714</span>  <a class="code" href="classPixTest.html#a7a5f2a44bd4582a276fe6ebdce7b8582">fHistOptions</a>.insert( make_pair(h2_PhMapsMin[rocIds[roc_it]], <span class="stringliteral">"colz"</span>) ); </div>
<div class="line"><a name="l00715"></a><span class="lineno"> 715</span>  }</div>
<div class="line"><a name="l00716"></a><span class="lineno"> 716</span>  <span class="keywordflow">for</span> (<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> i = 0; i < result_map.size(); ++i) {</div>
<div class="line"><a name="l00717"></a><span class="lineno"> 717</span>  h2_PhMapsMin[ (int) result_map[i].roc() ]->Fill( result_map[i].column(), result_map[i].row(), result_map[i].value());</div>
<div class="line"><a name="l00718"></a><span class="lineno"> 718</span>  }</div>
<div class="line"><a name="l00719"></a><span class="lineno"> 719</span>  <span class="comment">//removing blacklisted pixels (bincontent = 0) from histos</span></div>
<div class="line"><a name="l00720"></a><span class="lineno"> 720</span>  <span class="keywordflow">for</span>(std::vector<std::pair<uint8_t, pair<int, int> > >::iterator bad_it = badPixels.begin(); bad_it != badPixels.end(); bad_it++){</div>
<div class="line"><a name="l00721"></a><span class="lineno"> 721</span>  h2_PhMaps[ bad_it->first] ->SetBinContent( h2_PhMaps[ bad_it->first] ->FindFixBin(bad_it->second.first, bad_it->second.second), 0);</div>
<div class="line"><a name="l00722"></a><span class="lineno"> 722</span>  h2_PhMapsMin[ bad_it->first] ->SetBinContent( h2_PhMapsMin[ bad_it->first] ->FindFixBin(bad_it->second.first, bad_it->second.second), 0);</div>
<div class="line"><a name="l00723"></a><span class="lineno"> 723</span>  }</div>
<div class="line"><a name="l00724"></a><span class="lineno"> 724</span>  <span class="comment">//adjust z axis range and extract ph distribution</span></div>
<div class="line"><a name="l00725"></a><span class="lineno"> 725</span>  <span class="keywordflow">for</span>(<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> roc_it = 0; roc_it < rocIds.size(); roc_it++){</div>
<div class="line"><a name="l00726"></a><span class="lineno"> 726</span>  name = Form(<span class="stringliteral">"PH_distr_LowVcal_C%d"</span>, rocIds[roc_it]);</div>
<div class="line"><a name="l00727"></a><span class="lineno"> 727</span>  title = Form(<span class="stringliteral">"PH_distr_LowVcal_C%d"</span>, rocIds[roc_it]);</div>
<div class="line"><a name="l00728"></a><span class="lineno"> 728</span>  h2_PhMapsMin[ (int) rocIds[roc_it] ]->GetZaxis()->SetRangeUser(0., h2_PhMapsMin[ (<span class="keywordtype">int</span>) rocIds[roc_it] ]->GetMaximum() );</div>
<div class="line"><a name="l00729"></a><span class="lineno"> 729</span>  h1_PhMap = <a class="code" href="classPixTest.html#a3a43a68de3981f08a12d4d3c56028b77">distribution</a>( h2_PhMapsMin[ (<span class="keywordtype">int</span>) rocIds[roc_it] ], 255, 0., 255.);</div>
<div class="line"><a name="l00730"></a><span class="lineno"> 730</span>  h1_PhMapsMin.insert( make_pair(rocIds[roc_it], h1_PhMap) );</div>
<div class="line"><a name="l00731"></a><span class="lineno"> 731</span>  <a class="code" href="classPixTest.html#adbd070a27e5299a4f2b80b948fbee131">fHistList</a>.push_back(h1_PhMapsMin[rocIds[roc_it]]); </div>
<div class="line"><a name="l00732"></a><span class="lineno"> 732</span>  }</div>
<div class="line"><a name="l00733"></a><span class="lineno"> 733</span> }</div>
<div class="line"><a name="l00734"></a><span class="lineno"> 734</span> </div>
<div class="line"><a name="l00735"></a><span class="lineno"> 735</span> <span class="keywordtype">void</span> PixTestPhOptimization::DrawPhCurves(map<int, pxar::pixel > &maxpixels, map<int, pxar::pixel > &minpixels, std::map<uint8_t, int> &po_opt, std::map<uint8_t, int> &ps_opt){</div>
<div class="line"><a name="l00736"></a><span class="lineno"> 736</span>  vector<uint8_t> rocIds = <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a3bbaa8cf5eb2bd76411e924952a2081e">_dut</a>-><a class="code" href="classpxar_1_1dut.html#a630bc382889766282de95bec85af766e">getEnabledRocIDs</a>();</div>
<div class="line"><a name="l00737"></a><span class="lineno"> 737</span>  <span class="keywordtype">string</span> name, title;</div>
<div class="line"><a name="l00738"></a><span class="lineno"> 738</span>  TH1D *h1(0); </div>
<div class="line"><a name="l00739"></a><span class="lineno"> 739</span>  <span class="keywordflow">for</span>(<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> roc_it = 0; roc_it < rocIds.size(); roc_it++){</div>
<div class="line"><a name="l00740"></a><span class="lineno"> 740</span>  <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a13fad3782f3cd2f76acd6d9ae84e72d1">setDAC</a>(<span class="stringliteral">"ctrlreg"</span>,4);</div>
<div class="line"><a name="l00741"></a><span class="lineno"> 741</span>  }</div>
<div class="line"><a name="l00742"></a><span class="lineno"> 742</span>  vector<pair<uint8_t, vector<pixel> > > results;</div>
<div class="line"><a name="l00743"></a><span class="lineno"> 743</span>  <span class="keywordflow">for</span>(<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> roc_it = 0; roc_it < rocIds.size(); roc_it++){</div>
<div class="line"><a name="l00744"></a><span class="lineno"> 744</span>  <span class="comment">//draw PH curve for max and min pixel on every ROC</span></div>
<div class="line"><a name="l00745"></a><span class="lineno"> 745</span>  results.clear();</div>
<div class="line"><a name="l00746"></a><span class="lineno"> 746</span>  name = Form(<span class="stringliteral">"PH_c%d_r%d_C%d"</span>, maxpixels[roc_it].column(), maxpixels[roc_it].row(), rocIds[roc_it]);</div>
<div class="line"><a name="l00747"></a><span class="lineno"> 747</span>  title = Form(<span class="stringliteral">"PH_c%d_r%d_C%d, phscale = %d, phoffset = %d, maxpixel"</span>, maxpixels[roc_it].column(), maxpixels[roc_it].row(), rocIds[roc_it], ps_opt[rocIds[roc_it]], po_opt[rocIds[roc_it]]);</div>
<div class="line"><a name="l00748"></a><span class="lineno"> 748</span>  h1 = <a class="code" href="classPixTest.html#a0cf34ffb1e6ffd691a4641c0f89b2bd5">bookTH1D</a>(name, name, 256, 0., 256.);</div>
<div class="line"><a name="l00749"></a><span class="lineno"> 749</span>  <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a3bbaa8cf5eb2bd76411e924952a2081e">_dut</a>-><a class="code" href="classpxar_1_1dut.html#a79b4faf65b2296a4dda907ed3284e7ce">testAllPixels</a>(<span class="keyword">false</span>);</div>
<div class="line"><a name="l00750"></a><span class="lineno"> 750</span>  <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a3bbaa8cf5eb2bd76411e924952a2081e">_dut</a>-><a class="code" href="classpxar_1_1dut.html#a3547a151355a9920a706af71f472e65e">maskAllPixels</a>(<span class="keyword">true</span>);</div>
<div class="line"><a name="l00751"></a><span class="lineno"> 751</span>  <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a3bbaa8cf5eb2bd76411e924952a2081e">_dut</a>-><a class="code" href="classpxar_1_1dut.html#a08a6e724bd095b9142cf9c0701ca2a2d">testPixel</a>(maxpixels[roc_it].column(), maxpixels[roc_it].row(), <span class="keyword">true</span>, roc_it);</div>
<div class="line"><a name="l00752"></a><span class="lineno"> 752</span>  <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a3bbaa8cf5eb2bd76411e924952a2081e">_dut</a>-><a class="code" href="classpxar_1_1dut.html#a668c62d77171f2842ff8623558d616a6">maskPixel</a>(maxpixels[roc_it].column(), maxpixels[roc_it].row(), <span class="keyword">false</span>, roc_it);</div>
<div class="line"><a name="l00753"></a><span class="lineno"> 753</span>  <span class="keywordtype">int</span> cnt = 0; </div>
<div class="line"><a name="l00754"></a><span class="lineno"> 754</span>  <span class="keywordtype">bool</span> done = <span class="keyword">false</span>;</div>
<div class="line"><a name="l00755"></a><span class="lineno"> 755</span>  <span class="keywordflow">while</span> (!done) {</div>
<div class="line"><a name="l00756"></a><span class="lineno"> 756</span>  <span class="keywordflow">try</span> {</div>
<div class="line"><a name="l00757"></a><span class="lineno"> 757</span>  results = <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a71995f1d7d7500cc4f8a9203b3de197a">getPulseheightVsDAC</a>(<span class="stringliteral">"vcal"</span>, 0, 255, FLAG_FORCE_MASKED, 10);</div>
<div class="line"><a name="l00758"></a><span class="lineno"> 758</span>  done = <span class="keyword">true</span>;</div>
<div class="line"><a name="l00759"></a><span class="lineno"> 759</span>  } <span class="keywordflow">catch</span>(<a class="code" href="classpxar_1_1pxarException.html">pxarException</a> &e) {</div>
<div class="line"><a name="l00760"></a><span class="lineno"> 760</span>  LOG(logCRITICAL) << <span class="stringliteral">"pXar execption: "</span><< e.what(); </div>
<div class="line"><a name="l00761"></a><span class="lineno"> 761</span>  ++cnt;</div>
<div class="line"><a name="l00762"></a><span class="lineno"> 762</span>  }</div>
<div class="line"><a name="l00763"></a><span class="lineno"> 763</span>  done = (cnt>5) || done;</div>
<div class="line"><a name="l00764"></a><span class="lineno"> 764</span>  }</div>
<div class="line"><a name="l00765"></a><span class="lineno"> 765</span>  </div>
<div class="line"><a name="l00766"></a><span class="lineno"> 766</span>  <span class="keywordflow">for</span> (<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> i = 0; i < results.size(); ++i) {</div>
<div class="line"><a name="l00767"></a><span class="lineno"> 767</span>  pair<uint8_t, vector<pixel> > v = results[i];</div>
<div class="line"><a name="l00768"></a><span class="lineno"> 768</span>  <span class="keywordtype">int</span> idac = v.first; </div>
<div class="line"><a name="l00769"></a><span class="lineno"> 769</span>  vector<pixel> vpix = v.second;</div>
<div class="line"><a name="l00770"></a><span class="lineno"> 770</span>  <span class="keywordflow">for</span> (<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> ipix = 0; ipix < vpix.size(); ++ipix) {</div>
<div class="line"><a name="l00771"></a><span class="lineno"> 771</span>  h1->Fill(idac, vpix[ipix].value());</div>
<div class="line"><a name="l00772"></a><span class="lineno"> 772</span>  }</div>
<div class="line"><a name="l00773"></a><span class="lineno"> 773</span>  }</div>
<div class="line"><a name="l00774"></a><span class="lineno"> 774</span>  h1->SetMinimum(0);</div>
<div class="line"><a name="l00775"></a><span class="lineno"> 775</span>  <a class="code" href="classPixTest.html#aca8408bedc0f33ac2b2904d2ffd83327">setTitles</a>(h1, title.c_str(), <span class="stringliteral">"average PH"</span>);</div>
<div class="line"><a name="l00776"></a><span class="lineno"> 776</span>  <a class="code" href="classPixTest.html#adbd070a27e5299a4f2b80b948fbee131">fHistList</a>.push_back(h1); </div>
<div class="line"><a name="l00777"></a><span class="lineno"> 777</span>  </div>
<div class="line"><a name="l00778"></a><span class="lineno"> 778</span>  results.clear();</div>
<div class="line"><a name="l00779"></a><span class="lineno"> 779</span>  </div>
<div class="line"><a name="l00780"></a><span class="lineno"> 780</span>  name = Form(<span class="stringliteral">"PH_c%d_r%d_C%d"</span>, minpixels[roc_it].column(), minpixels[roc_it].row(), rocIds[roc_it]);</div>
<div class="line"><a name="l00781"></a><span class="lineno"> 781</span>  title = Form(<span class="stringliteral">"PH_c%d_r%d_C%d, phscale = %d, phoffset = %d, minpixel"</span>, minpixels[roc_it].column(), minpixels[roc_it].row(), rocIds[roc_it], ps_opt[rocIds[roc_it]], po_opt[rocIds[roc_it]]);</div>
<div class="line"><a name="l00782"></a><span class="lineno"> 782</span>  h1 = <a class="code" href="classPixTest.html#a0cf34ffb1e6ffd691a4641c0f89b2bd5">bookTH1D</a>(name, name, 256, 0., 256.);</div>
<div class="line"><a name="l00783"></a><span class="lineno"> 783</span>  <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a3bbaa8cf5eb2bd76411e924952a2081e">_dut</a>-><a class="code" href="classpxar_1_1dut.html#a79b4faf65b2296a4dda907ed3284e7ce">testAllPixels</a>(<span class="keyword">false</span>);</div>
<div class="line"><a name="l00784"></a><span class="lineno"> 784</span>  <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a3bbaa8cf5eb2bd76411e924952a2081e">_dut</a>-><a class="code" href="classpxar_1_1dut.html#a3547a151355a9920a706af71f472e65e">maskAllPixels</a>(<span class="keyword">true</span>);</div>
<div class="line"><a name="l00785"></a><span class="lineno"> 785</span>  <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a3bbaa8cf5eb2bd76411e924952a2081e">_dut</a>-><a class="code" href="classpxar_1_1dut.html#a08a6e724bd095b9142cf9c0701ca2a2d">testPixel</a>(minpixels[roc_it].column(), minpixels[roc_it].row(), <span class="keyword">true</span>, roc_it);</div>
<div class="line"><a name="l00786"></a><span class="lineno"> 786</span>  <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a3bbaa8cf5eb2bd76411e924952a2081e">_dut</a>-><a class="code" href="classpxar_1_1dut.html#a668c62d77171f2842ff8623558d616a6">maskPixel</a>(minpixels[roc_it].column(), minpixels[roc_it].row(), <span class="keyword">false</span>, roc_it);</div>
<div class="line"><a name="l00787"></a><span class="lineno"> 787</span>  cnt = 0; </div>
<div class="line"><a name="l00788"></a><span class="lineno"> 788</span>  done = <span class="keyword">false</span>;</div>
<div class="line"><a name="l00789"></a><span class="lineno"> 789</span>  <span class="keywordflow">while</span> (!done) {</div>
<div class="line"><a name="l00790"></a><span class="lineno"> 790</span>  <span class="keywordflow">try</span> {</div>
<div class="line"><a name="l00791"></a><span class="lineno"> 791</span>  results = <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a71995f1d7d7500cc4f8a9203b3de197a">getPulseheightVsDAC</a>(<span class="stringliteral">"vcal"</span>, 0, 255, FLAG_FORCE_MASKED, 10);</div>
<div class="line"><a name="l00792"></a><span class="lineno"> 792</span>  done = <span class="keyword">true</span>;</div>
<div class="line"><a name="l00793"></a><span class="lineno"> 793</span>  } <span class="keywordflow">catch</span>(<a class="code" href="classpxar_1_1pxarException.html">pxarException</a> &e) {</div>
<div class="line"><a name="l00794"></a><span class="lineno"> 794</span>  LOG(logCRITICAL) << <span class="stringliteral">"pXar execption: "</span><< e.what(); </div>
<div class="line"><a name="l00795"></a><span class="lineno"> 795</span>  ++cnt;</div>
<div class="line"><a name="l00796"></a><span class="lineno"> 796</span>  }</div>
<div class="line"><a name="l00797"></a><span class="lineno"> 797</span>  done = (cnt>5) || done;</div>
<div class="line"><a name="l00798"></a><span class="lineno"> 798</span>  }</div>
<div class="line"><a name="l00799"></a><span class="lineno"> 799</span>  </div>
<div class="line"><a name="l00800"></a><span class="lineno"> 800</span>  <span class="keywordflow">for</span> (<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> i = 0; i < results.size(); ++i) {</div>
<div class="line"><a name="l00801"></a><span class="lineno"> 801</span>  pair<uint8_t, vector<pixel> > v = results[i];</div>
<div class="line"><a name="l00802"></a><span class="lineno"> 802</span>  <span class="keywordtype">int</span> idac = v.first; </div>
<div class="line"><a name="l00803"></a><span class="lineno"> 803</span>  vector<pixel> vpix = v.second;</div>
<div class="line"><a name="l00804"></a><span class="lineno"> 804</span>  <span class="keywordflow">for</span> (<span class="keywordtype">unsigned</span> <span class="keywordtype">int</span> ipix = 0; ipix < vpix.size(); ++ipix) {</div>
<div class="line"><a name="l00805"></a><span class="lineno"> 805</span>  h1->Fill(idac, vpix[ipix].value());</div>
<div class="line"><a name="l00806"></a><span class="lineno"> 806</span>  }</div>
<div class="line"><a name="l00807"></a><span class="lineno"> 807</span>  }</div>
<div class="line"><a name="l00808"></a><span class="lineno"> 808</span>  h1->SetMinimum(0);</div>
<div class="line"><a name="l00809"></a><span class="lineno"> 809</span>  <a class="code" href="classPixTest.html#aca8408bedc0f33ac2b2904d2ffd83327">setTitles</a>(h1, title.c_str(), <span class="stringliteral">"average PH"</span>);</div>
<div class="line"><a name="l00810"></a><span class="lineno"> 810</span>  <a class="code" href="classPixTest.html#adbd070a27e5299a4f2b80b948fbee131">fHistList</a>.push_back(h1);</div>
<div class="line"><a name="l00811"></a><span class="lineno"> 811</span>  }</div>
<div class="line"><a name="l00812"></a><span class="lineno"> 812</span> }</div>
<div class="line"><a name="l00813"></a><span class="lineno"> 813</span> </div>
<div class="line"><a name="l00814"></a><span class="lineno"> 814</span> <span class="keywordtype">void</span> PixTestPhOptimization::MaxPhVsDacDac(std::vector< std::pair<uint8_t, std::pair<uint8_t, std::vector<pxar::pixel> > > > &dacdac_max, map<int, pxar::pixel> maxpixels){</div>
<div class="line"><a name="l00815"></a><span class="lineno"> 815</span>  </div>
<div class="line"><a name="l00816"></a><span class="lineno"> 816</span>  <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a3bbaa8cf5eb2bd76411e924952a2081e">_dut</a>-><a class="code" href="classpxar_1_1dut.html#a79b4faf65b2296a4dda907ed3284e7ce">testAllPixels</a>(<span class="keyword">false</span>);</div>
<div class="line"><a name="l00817"></a><span class="lineno"> 817</span>  <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a3bbaa8cf5eb2bd76411e924952a2081e">_dut</a>-><a class="code" href="classpxar_1_1dut.html#a3547a151355a9920a706af71f472e65e">maskAllPixels</a>(<span class="keyword">true</span>);</div>
<div class="line"><a name="l00818"></a><span class="lineno"> 818</span>  <span class="keywordflow">for</span>(std::map<int, pxar::pixel>::iterator maxp_it = maxpixels.begin(); maxp_it != maxpixels.end(); maxp_it++){</div>
<div class="line"><a name="l00819"></a><span class="lineno"> 819</span>  <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a3bbaa8cf5eb2bd76411e924952a2081e">_dut</a>-><a class="code" href="classpxar_1_1dut.html#a08a6e724bd095b9142cf9c0701ca2a2d">testPixel</a>(maxp_it->second.column(),maxp_it->second.row(),<span class="keyword">true</span>, <a class="code" href="classPixTest.html#ae3739af031770e43037f8fcaecd1988c">getIdxFromId</a>(maxp_it->second.roc()));</div>
<div class="line"><a name="l00820"></a><span class="lineno"> 820</span>  <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a3bbaa8cf5eb2bd76411e924952a2081e">_dut</a>-><a class="code" href="classpxar_1_1dut.html#a668c62d77171f2842ff8623558d616a6">maskPixel</a>(maxp_it->second.column(),maxp_it->second.row(),<span class="keyword">false</span>, <a class="code" href="classPixTest.html#ae3739af031770e43037f8fcaecd1988c">getIdxFromId</a>(maxp_it->second.roc()));</div>
<div class="line"><a name="l00821"></a><span class="lineno"> 821</span>  } </div>
<div class="line"><a name="l00822"></a><span class="lineno"> 822</span>  <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a13fad3782f3cd2f76acd6d9ae84e72d1">setDAC</a>(<span class="stringliteral">"vcal"</span>,255);</div>
<div class="line"><a name="l00823"></a><span class="lineno"> 823</span>  <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a13fad3782f3cd2f76acd6d9ae84e72d1">setDAC</a>(<span class="stringliteral">"ctrlreg"</span>,4);</div>
<div class="line"><a name="l00824"></a><span class="lineno"> 824</span>  </div>
<div class="line"><a name="l00825"></a><span class="lineno"> 825</span>  <span class="comment">//scanning through offset and scale for max pixel (or randpixel)</span></div>
<div class="line"><a name="l00826"></a><span class="lineno"> 826</span>  <span class="keywordtype">int</span> cnt = 0; </div>
<div class="line"><a name="l00827"></a><span class="lineno"> 827</span>  <span class="keywordtype">bool</span> done = <span class="keyword">false</span>;</div>
<div class="line"><a name="l00828"></a><span class="lineno"> 828</span>  <span class="keywordflow">while</span> (!done) {</div>
<div class="line"><a name="l00829"></a><span class="lineno"> 829</span>  <span class="keywordflow">try</span> {</div>
<div class="line"><a name="l00830"></a><span class="lineno"> 830</span>  dacdac_max = <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a9377c701b65b5a4c33213519f84e3b6f">getPulseheightVsDACDAC</a>(<span class="stringliteral">"phoffset"</span>,0,255,<span class="stringliteral">"phscale"</span>,0,255,0,10);</div>
<div class="line"><a name="l00831"></a><span class="lineno"> 831</span>  done = <span class="keyword">true</span>;</div>
<div class="line"><a name="l00832"></a><span class="lineno"> 832</span>  } <span class="keywordflow">catch</span>(<a class="code" href="classpxar_1_1pxarException.html">pxarException</a> &e) {</div>
<div class="line"><a name="l00833"></a><span class="lineno"> 833</span>  LOG(logCRITICAL) << <span class="stringliteral">"pXar execption: "</span><< e.what(); </div>
<div class="line"><a name="l00834"></a><span class="lineno"> 834</span>  ++cnt;</div>
<div class="line"><a name="l00835"></a><span class="lineno"> 835</span>  }</div>
<div class="line"><a name="l00836"></a><span class="lineno"> 836</span>  done = (cnt>5) || done;</div>
<div class="line"><a name="l00837"></a><span class="lineno"> 837</span>  }</div>
<div class="line"><a name="l00838"></a><span class="lineno"> 838</span>  <span class="comment">//std::map<uint8_t, std::map<std::pair<uint8_t, uint8_t>, pxar::pixel > > dacdacmax_map;</span></div>
<div class="line"><a name="l00839"></a><span class="lineno"> 839</span>  <span class="comment">//std::map<std::pair<uint8_t ,uint8_t >, pxar::pixel > tempMap;</span></div>
<div class="line"><a name="l00840"></a><span class="lineno"> 840</span>  <span class="keywordflow">for</span>( std::vector< std::pair<uint8_t, std::pair<uint8_t, std::vector<pxar::pixel> > > >::iterator dacit_max = dacdac_max.begin(); dacit_max < dacdac_max.end(); dacit_max+=10){</div>
<div class="line"><a name="l00841"></a><span class="lineno"> 841</span>  LOG(logDEBUG)<<<span class="stringliteral">"size "</span><<(int)(dacdac_max.end() - dacdac_max.begin())<<<span class="stringliteral">"pos "</span><<(<span class="keywordtype">int</span>)(dacdac_max.end() - dacit_max)<<<span class="stringliteral">" sizepix "</span><<(<span class="keywordtype">int</span>)dacit_max->second.second.size();</div>
<div class="line"><a name="l00842"></a><span class="lineno"> 842</span>  <span class="comment">// for(int ipix=0; ipix < dacit_max->second.second.size(); ipix++ ){</span></div>
<div class="line"><a name="l00843"></a><span class="lineno"> 843</span>  <span class="comment">// LOG(logDEBUG)<<"roc "<< (int)dacit_max->second.second[ipix].roc() <<" col "<<(int)dacit_max->second.second[ipix].column() << " row "<<(int)dacit_max->second.second[ipix].row();</span></div>
<div class="line"><a name="l00844"></a><span class="lineno"> 844</span>  <span class="comment">// }</span></div>
<div class="line"><a name="l00845"></a><span class="lineno"> 845</span>  <span class="comment">// for(int ipix=0; ipix < dacit_max->second.second.size(); ipix++ ){</span></div>
<div class="line"><a name="l00846"></a><span class="lineno"> 846</span>  <span class="comment">// tempMap[ make_pair(dacit_max->first, dacit_max->second.first) ] = dacit_max->second.second.at(ipix);</span></div>
<div class="line"><a name="l00847"></a><span class="lineno"> 847</span>  <span class="comment">// dacdacmax_map[dacit_max->second.second[ipix].roc()] = tempMap;</span></div>
<div class="line"><a name="l00848"></a><span class="lineno"> 848</span>  <span class="comment">// tempMap.clear();</span></div>
<div class="line"><a name="l00849"></a><span class="lineno"> 849</span>  <span class="comment">// }</span></div>
<div class="line"><a name="l00850"></a><span class="lineno"> 850</span>  }</div>
<div class="line"><a name="l00851"></a><span class="lineno"> 851</span>  </div>
<div class="line"><a name="l00852"></a><span class="lineno"> 852</span>  </div>
<div class="line"><a name="l00853"></a><span class="lineno"> 853</span> }</div>
<div class="line"><a name="l00854"></a><span class="lineno"> 854</span> </div>
<div class="line"><a name="l00855"></a><span class="lineno"> 855</span> <span class="keywordtype">void</span> PixTestPhOptimization::MinPhVsDacDac(std::vector< std::pair<uint8_t, std::pair<uint8_t, std::vector<pxar::pixel> > > > &dacdac_min, map<int, pxar::pixel> minpixels, std::map<int, int> &minVcal){</div>
<div class="line"><a name="l00856"></a><span class="lineno"> 856</span> </div>
<div class="line"><a name="l00857"></a><span class="lineno"> 857</span> </div>
<div class="line"><a name="l00858"></a><span class="lineno"> 858</span>  <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a3bbaa8cf5eb2bd76411e924952a2081e">_dut</a>-><a class="code" href="classpxar_1_1dut.html#a79b4faf65b2296a4dda907ed3284e7ce">testAllPixels</a>(<span class="keyword">false</span>);</div>
<div class="line"><a name="l00859"></a><span class="lineno"> 859</span>  <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a3bbaa8cf5eb2bd76411e924952a2081e">_dut</a>-><a class="code" href="classpxar_1_1dut.html#a3547a151355a9920a706af71f472e65e">maskAllPixels</a>(<span class="keyword">true</span>);</div>
<div class="line"><a name="l00860"></a><span class="lineno"> 860</span>  <span class="keywordflow">for</span>(std::map<int, pxar::pixel>::iterator minp_it = minpixels.begin(); minp_it != minpixels.end(); minp_it++){</div>
<div class="line"><a name="l00861"></a><span class="lineno"> 861</span>  <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a3bbaa8cf5eb2bd76411e924952a2081e">_dut</a>-><a class="code" href="classpxar_1_1dut.html#a08a6e724bd095b9142cf9c0701ca2a2d">testPixel</a>(minp_it->second.column(),minp_it->second.row(),<span class="keyword">true</span>, <a class="code" href="classPixTest.html#ae3739af031770e43037f8fcaecd1988c">getIdxFromId</a>(minp_it->second.roc()));</div>
<div class="line"><a name="l00862"></a><span class="lineno"> 862</span>  <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a3bbaa8cf5eb2bd76411e924952a2081e">_dut</a>-><a class="code" href="classpxar_1_1dut.html#a668c62d77171f2842ff8623558d616a6">maskPixel</a>(minp_it->second.column(),minp_it->second.row(),<span class="keyword">false</span>, <a class="code" href="classPixTest.html#ae3739af031770e43037f8fcaecd1988c">getIdxFromId</a>(minp_it->second.roc()));</div>
<div class="line"><a name="l00863"></a><span class="lineno"> 863</span>  }</div>
<div class="line"><a name="l00864"></a><span class="lineno"> 864</span>  </div>
<div class="line"><a name="l00865"></a><span class="lineno"> 865</span>  <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a13fad3782f3cd2f76acd6d9ae84e72d1">setDAC</a>(<span class="stringliteral">"ctrlreg"</span>,0);</div>
<div class="line"><a name="l00866"></a><span class="lineno"> 866</span>  <span class="keywordflow">for</span>(std::map<int, int>::iterator ivcal = minVcal.begin(); ivcal != minVcal.end(); ivcal++){</div>
<div class="line"><a name="l00867"></a><span class="lineno"> 867</span>  <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a13fad3782f3cd2f76acd6d9ae84e72d1">setDAC</a>(<span class="stringliteral">"vcal"</span>,minVcal[ivcal->first]+10, <a class="code" href="classPixTest.html#ae3739af031770e43037f8fcaecd1988c">getIdxFromId</a>(ivcal->first));</div>
<div class="line"><a name="l00868"></a><span class="lineno"> 868</span>  }</div>
<div class="line"><a name="l00869"></a><span class="lineno"> 869</span>  </div>
<div class="line"><a name="l00870"></a><span class="lineno"> 870</span>  <span class="comment">//scanning through offset and scale for min pixel (or same randpixel)</span></div>
<div class="line"><a name="l00871"></a><span class="lineno"> 871</span>  <span class="keywordtype">int</span> cnt = 0; </div>
<div class="line"><a name="l00872"></a><span class="lineno"> 872</span>  <span class="keywordtype">bool</span> done = <span class="keyword">false</span>;</div>
<div class="line"><a name="l00873"></a><span class="lineno"> 873</span>  <span class="keywordflow">while</span> (!done) {</div>
<div class="line"><a name="l00874"></a><span class="lineno"> 874</span>  <span class="keywordflow">try</span> {</div>
<div class="line"><a name="l00875"></a><span class="lineno"> 875</span>  dacdac_min = <a class="code" href="classPixTest.html#a072772938d1336e8b439eeeae4a5aed2">fApi</a>-><a class="code" href="classpxar_1_1pxarCore.html#a9377c701b65b5a4c33213519f84e3b6f">getPulseheightVsDACDAC</a>(<span class="stringliteral">"phoffset"</span>,0,255,<span class="stringliteral">"phscale"</span>,0,255,0,10);</div>
<div class="line"><a name="l00876"></a><span class="lineno"> 876</span>  done = <span class="keyword">true</span>;</div>
<div class="line"><a name="l00877"></a><span class="lineno"> 877</span>  } <span class="keywordflow">catch</span>(<a class="code" href="classpxar_1_1pxarException.html">pxarException</a> &e) {</div>
<div class="line"><a name="l00878"></a><span class="lineno"> 878</span>  LOG(logCRITICAL) << <span class="stringliteral">"pXar execption: "</span><< e.what(); </div>
<div class="line"><a name="l00879"></a><span class="lineno"> 879</span>  ++cnt;</div>
<div class="line"><a name="l00880"></a><span class="lineno"> 880</span>  }</div>
<div class="line"><a name="l00881"></a><span class="lineno"> 881</span>  done = (cnt>5) || done;</div>
<div class="line"><a name="l00882"></a><span class="lineno"> 882</span>  }</div>
<div class="line"><a name="l00883"></a><span class="lineno"> 883</span> </div>
<div class="line"><a name="l00884"></a><span class="lineno"> 884</span>  <span class="comment">// std::map<uint8_t, std::map<std::pair<uint8_t, uint8_t>, pxar::pixel > > dacdacmin_map;</span></div>
<div class="line"><a name="l00885"></a><span class="lineno"> 885</span>  <span class="comment">//std::map<std::pair<uint8_t ,uint8_t >, pxar::pixel > tempMap;</span></div>
<div class="line"><a name="l00886"></a><span class="lineno"> 886</span> <span class="comment">// for( std::vector< std::pair<uint8_t, std::pair<uint8_t, std::vector<pxar::pixel> > > >::iterator dacit_min = dacdac_min.begin(); dacit_min < dacdac_min.end(); dacit_min+=1000){</span></div>
<div class="line"><a name="l00887"></a><span class="lineno"> 887</span> <span class="comment">// LOG(logDEBUG)<<"dacdac_min: size "<<(int)(dacdac_min.end() - dacdac_min.begin())<<"pos "<<(int)(dacdac_min.end() - dacit_min)<<" sizepix "<<(int)dacit_min->second.second.size();</span></div>
<div class="line"><a name="l00888"></a><span class="lineno"> 888</span> <span class="comment">// for(int ipix=0; ipix < dacit_min->second.second.size(); ipix++ ){</span></div>
<div class="line"><a name="l00889"></a><span class="lineno"> 889</span> <span class="comment">// LOG(logDEBUG)<<"roc "<< (int)dacit_min->second.second[ipix].roc() <<" col "<<(int)dacit_min->second.second[ipix].column() << " row "<<(int)dacit_min->second.second[ipix].row();</span></div>
<div class="line"><a name="l00890"></a><span class="lineno"> 890</span> <span class="comment">// }</span></div>
<div class="line"><a name="l00891"></a><span class="lineno"> 891</span> <span class="comment">// for(int ipix=0; ipix < dacit_min->second.second.size(); ipix++ ){</span></div>
<div class="line"><a name="l00892"></a><span class="lineno"> 892</span> <span class="comment">// tempMap[ make_pair(dacit_min->first, dacit_min->second.first) ] = dacit_min->second.second.at(ipix);</span></div>
<div class="line"><a name="l00893"></a><span class="lineno"> 893</span> <span class="comment">// dacdacmin_map[dacit_min->second.second[ipix].roc()] = tempMap;</span></div>
<div class="line"><a name="l00894"></a><span class="lineno"> 894</span> <span class="comment">// tempMap.clear();</span></div>
<div class="line"><a name="l00895"></a><span class="lineno"> 895</span> <span class="comment">// }</span></div>
<div class="line"><a name="l00896"></a><span class="lineno"> 896</span>  }</div>
<div class="line"><a name="l00897"></a><span class="lineno"> 897</span> </div>
<div class="line"><a name="l00898"></a><span class="lineno"> 898</span> </div>
<div class="line"><a name="l00899"></a><span class="lineno"> 899</span> </div>
<div class="line"><a name="l00900"></a><span class="lineno"> 900</span> <span class="keywordtype">void</span> PixTestPhOptimization::SetMinThr(){</div>
<div class="line"><a name="l00901"></a><span class="lineno"> 901</span>  fMinThr=0;</div>
<div class="line"><a name="l00902"></a><span class="lineno"> 902</span>  <span class="keywordtype">string</span> trimfile = <a class="code" href="classPixTest.html#a00e08fccb21d6de2bbe5a8e3f612137c">fPixSetup</a>->getConfigParameters()->getTrimParameterFileName() + <a class="code" href="classPixTest.html#a00e08fccb21d6de2bbe5a8e3f612137c">fPixSetup</a>->getConfigParameters()->getTrimVcalSufix();</div>
<div class="line"><a name="l00903"></a><span class="lineno"> 903</span>  trimfile.erase(0,14); <span class="comment">//erases 'trimParamerers' from the name of the file</span></div>
<div class="line"><a name="l00904"></a><span class="lineno"> 904</span>  <span class="keywordflow">if</span>(0!=(trimfile.compare(<span class="stringliteral">""</span>))){</div>
<div class="line"><a name="l00905"></a><span class="lineno"> 905</span>  fMinThr = atoi(trimfile.c_str());</div>
<div class="line"><a name="l00906"></a><span class="lineno"> 906</span>  }</div>
<div class="line"><a name="l00907"></a><span class="lineno"> 907</span>  <span class="keywordflow">else</span>{</div>
<div class="line"><a name="l00908"></a><span class="lineno"> 908</span>  LOG(logINFO)<<<span class="stringliteral">"***::: The test requires a TRIMMED module, but no TrimParameterFile is loaded :::***"</span>;</div>
<div class="line"><a name="l00909"></a><span class="lineno"> 909</span>  LOG(logINFO)<<<span class="stringliteral">"Vcal lower sample point will be set to 40"</span>;</div>
<div class="line"><a name="l00910"></a><span class="lineno"> 910</span>  fMinThr=40;</div>
<div class="line"><a name="l00911"></a><span class="lineno"> 911</span>  }</div>