Repositories list

• study-wrangler

  Public
  Code to keep study data tidy

  Dockerfile

  •

  Apache License 2.0

  •0•0•0•1•Updated Dec 22, 2024Dec 22, 2024

• TestDatasets

  Public
  Apache License 2.0

  •0•0•0•0•Updated Dec 20, 2024Dec 20, 2024

• EbrcModelCommon

  Public
  Java

  •

  Apache License 2.0

  •2•1•4•1•Updated Dec 20, 2024Dec 20, 2024

• ApiCommonWorkflow

  Public
  Perl

  •

  Apache License 2.0

  •1•0•0•3•Updated Dec 20, 2024Dec 20, 2024

• ApiCommonData

  Public
  Perl

  •

  Apache License 2.0

  •3•3•0•1•Updated Dec 20, 2024Dec 20, 2024

• CBIL

  Public
  Perl

  •

  Apache License 2.0

  •3•0•0•2•Updated Dec 20, 2024Dec 20, 2024

• tool-tomcat-rpm-builder

  Public
  Tooling to easily build new Tomcat RPMs as new versions are released.

  Shell

  •

  Apache License 2.0

  •0•0•0•0•Updated Dec 20, 2024Dec 20, 2024

• service-eda

  Public
  Repo containing EDA web service

  Java

  •

  Apache License 2.0

  •0•0•22•1•Updated Dec 20, 2024Dec 20, 2024

• SiteSearchData

  Public
  WDK Model and other code needed to run a WDK and generate reports to make JSON files to index in solr

  Python

  •

  Apache License 2.0

  •0•1•7•2•Updated Dec 20, 2024Dec 20, 2024

• ReFlow

  Public
  JavaScript

  •

  Apache License 2.0

  •2•1•0•2•Updated Dec 20, 2024Dec 20, 2024

• ApidbSchema

  Public
  SQL and scripts to install the ApiDB schema

  PLSQL

  •

  Apache License 2.0

  •0•0•0•2•Updated Dec 20, 2024Dec 20, 2024

• OrthoMCLModel

  Public
  Java

  •

  Apache License 2.0

  •0•0•0•1•Updated Dec 19, 2024Dec 19, 2024

• ApiCommonModel

  Public
  Perl

  •

  Apache License 2.0

  •0•1•1•8•Updated Dec 19, 2024Dec 19, 2024

• StaticContent

  Public
  HTML

  •

  Apache License 2.0

  •6•0•0•4•Updated Dec 19, 2024Dec 19, 2024

• web-monorepo

  Public
  A monorepo that contains all frontend code for VEuPathDB websites

  TypeScript

  •

  Apache License 2.0

  •0•2•188•23•Updated Dec 19, 2024Dec 19, 2024

• GusAppFramework

  Public
  Perl

  •

  Apache License 2.0

  •2•0•0•0•Updated Dec 19, 2024Dec 19, 2024

• tomcat-instance-framework

  Public
  Manage multiple Tomcat instances for EuPathDB

  Shell

  •

  Apache License 2.0

  •0•0•0•1•Updated Dec 19, 2024Dec 19, 2024

• repeat-masker-nextflow

  Public
  nextflow workflow to modernize current repeatMasker workflow steps

  Perl

  •

  Apache License 2.0

  •1•1•0•0•Updated Dec 18, 2024Dec 18, 2024

• bulk-rnaseq-nextflow

  Public
  Bulk RNASeq Workflow

  Nextflow

  •

  MIT License

  •0•0•0•0•Updated Dec 18, 2024Dec 18, 2024

• OAuth2Server

  Public
  Java

  •

  Apache License 2.0

  •0•0•1•2•Updated Dec 18, 2024Dec 18, 2024

• OrthoMCLWebsite

  Public
  Apache License 2.0

  •0•0•0•1•Updated Dec 18, 2024Dec 18, 2024

• MicrobiomeWebsite

  Public
  R

  •

  Apache License 2.0

  •0•2•2•1•Updated Dec 18, 2024Dec 18, 2024

• ClinEpiWebsite

  Public
  CSS

  •

  Apache License 2.0

  •0•2•3•1•Updated Dec 18, 2024Dec 18, 2024

• ApiCommonWebsite

  Public
  Perl

  •

  Apache License 2.0

  •1•3•0•1•Updated Dec 18, 2024Dec 18, 2024

• puppet-ebrc_httpd_setup

  Public
  Puppet module to manage Apache HTTPD per EuPathDB specs

  Perl

  •0•0•0•0•Updated Dec 17, 2024Dec 17, 2024

• iedb-epitope-mapping-nextflow

  Public
  Nextflow

  •

  Apache License 2.0

  •1•0•0•0•Updated Dec 17, 2024Dec 17, 2024

• vdi-service

  Public
  vdi

  Kotlin

  •

  Apache License 2.0

  •0•0•37•2•Updated Dec 17, 2024Dec 17, 2024

• lib-jackson-singleton

  Public
  Preconfigured Jackson & Utils

  jsonlibraryjackson

  Kotlin

  •

  GNU General Public License v3.0

  •0•0•0•0•Updated Dec 12, 2024Dec 12, 2024

• puppet-apache_ext

  Public
  extension to Puppetlabs apache module

  Ruby

  •0•0•0•0•Updated Dec 11, 2024Dec 11, 2024

• WDK

  Public
  Java

  •

  Apache License 2.0

  •4•1•13•6•Updated Dec 10, 2024Dec 10, 2024