Mangiola Laboratory

All

7 repositories

sccomp
Public
Testing differences in cell type proportions from single-cell data.
composition bayesian microbiome r-package single-cell cytof random-effects multilevel proportions batch-correction
R
•
GNU General Public License v3.0
•7•94•9•3•Updated Nov 29, 2024Nov 29, 2024
cellNexus
Public
Query 50 million harmonised cells from the CELLxGENE ready to analyse, at different resolution
R
•
GNU General Public License v3.0
•7•0•0•0•Updated Nov 21, 2024Nov 21, 2024
HPCell
Public
Convert your single-cell/spatial analyses to parallel HPC/cloud workflows just using pipes in R
cloud r hpc tidyverse single-cell hpc-cluster targets-pipeline
R
•5•13•11•4•Updated Nov 14, 2024Nov 14, 2024
Mangiola-Lab-Open-Positions
Public
This repository lists the current open positions in the Mangiola Laboratory
0•1•0•0•Updated Aug 6, 2024Aug 6, 2024
singscoreHCA
Public
An R package to score signatures on the HumanCellAtlas, single-cell or pseudobulk (e.g. GSEA,singscore)
R
•
GNU General Public License v3.0
•0•0•0•0•Updated Jul 11, 2024Jul 11, 2024
curatedCellAtlas
Public
0•0•0•0•Updated Apr 23, 2024Apr 23, 2024
supervision
Public
0•0•0•0•Updated Nov 17, 2023Nov 17, 2023