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    • PyVCF

      Public
      A Variant Call Format reader for Python.
      Python
      Other
      223001Updated Jul 3, 2024Jul 3, 2024
    • Builds a docker container wrapping higlass-server and higlass-client in nginx
      Shell
      MIT License
      14000Updated Jun 12, 2024Jun 12, 2024
    • Scripts for the High-throughput Analysis of Replication Timing
      Shell
      6200Updated Sep 27, 2023Sep 27, 2023
    • Governance, legal and policy information related to Fourfront
      MIT License
      2000Updated Sep 5, 2023Sep 5, 2023
    • 4DN chip-seq pipeline, inherited from ENCODE chip-seq pipeline
      Python
      MIT License
      123100Updated Jan 18, 2023Jan 18, 2023
    • higlass

      Public
      Fast contact matrix visualization for the web.
      JavaScript
      MIT License
      52000Updated Jun 1, 2022Jun 1, 2022
    • Subprocess WSGI middleware and Pyramid tween.
      Python
      MIT License
      4000Updated Mar 30, 2022Mar 30, 2022
    • A browser-ready efficient scrolling container based on UITableView
      JavaScript
      Other
      274100Updated Mar 21, 2022Mar 21, 2022
    • iMARGI-Docker distributes the iMARGI sequencing data processing pipeline
      Shell
      5000Updated Aug 16, 2021Aug 16, 2021
    • A registry of publicly available datasets on AWS
      Python
      Apache License 2.0
      936000Updated May 4, 2021May 4, 2021
    • 4DN RNA-seq pipeline, inherited from ENCODE RNA-seq pipeline
      Python
      MIT License
      64100Updated Mar 5, 2020Mar 5, 2020
    • A place to submit conda recipes before they become fully fledged conda-forge feedstocks
      Python
      BSD 3-Clause "New" or "Revised" License
      5k000Updated Jan 7, 2020Jan 7, 2020
    • aws-cli

      Public
      Universal Command Line Interface for Amazon Web Services
      Python
      Other
      4.2k000Updated May 24, 2019May 24, 2019
    • clodius

      Public
      Clodius is a tool for breaking up large data sets into smaller tiles that can subsequently be displayed using an appropriate viewer.
      Python
      MIT License
      21000Updated Apr 2, 2019Apr 2, 2019
    • 4DN ATAC-seq pipeline, inherited from ENCODE ATAC-seq pipeline
      Python
      MIT License
      173200Updated Mar 7, 2019Mar 7, 2019
    • cooltools

      Public
      The tools for your .cool's
      Python
      MIT License
      51000Updated Sep 21, 2018Sep 21, 2018
    • Python
      MIT License
      21000Updated Jun 27, 2018Jun 27, 2018
    • cwltool

      Public
      Common Workflow Language reference implementation
      Web Ontology Language
      Apache License 2.0
      231000Updated Sep 27, 2017Sep 27, 2017
    • Semantic Annotations for Linked Avro Data
      Web Ontology Language
      Apache License 2.0
      62000Updated Sep 27, 2017Sep 27, 2017
    • A 3D genome data processing tutorial for 2017 4DN Annual Meeting
      HTML
      10100Updated Sep 19, 2017Sep 19, 2017
    • An(other) implementation of JSON Schema for Python
      Python
      MIT License
      581000Updated Mar 4, 2016Mar 4, 2016
    • Parse queries in Lucene and Elasticsearch syntaxes
      ANTLR
      Other
      6100Updated Mar 3, 2016Mar 3, 2016
    • venusian

      Public
      A library which allows framework authors to defer decorator actions.
      Python
      Other
      39000Updated Feb 23, 2016Feb 23, 2016
    • JavaScript
      2000Updated Feb 9, 2016Feb 9, 2016
    24 repositories found. List is sorted by Last pushed in descending order.