diff --git a/.github/workflows/cibuild.yml b/.github/workflows/cibuild.yml
index 37e37a84945..9f34ed64a9f 100644
--- a/.github/workflows/cibuild.yml
+++ b/.github/workflows/cibuild.yml
@@ -154,7 +154,7 @@ jobs:
           # schema hasn't changed.
           # example commit: https://github.com/opentripplanner/docs/commit/45e6ddf8e4a4
           
-          SCHEMA_FILE_MODIFIED=`git log -n 1 --pretty=format:%ct src/main/resources/org/opentripplanner/apis/gtfs/schema.graphqls`
+          SCHEMA_FILE_MODIFIED=`git log -n 1 --pretty=format:%ct application/src/main/resources/org/opentripplanner/apis/gtfs/schema.graphqls`
           echo "schema modified at ${SCHEMA_FILE_MODIFIED}"
           git checkout $LOCAL_BRANCH
           DOCS_MODIFIED=`git log -n 1 --pretty=format:%ct api/dev-2.x/graphql-gtfs/introduction.html`
@@ -181,7 +181,7 @@ jobs:
         with:
           node-version: 16
       - name: Run code generator
-        working-directory: src/main/java/org/opentripplanner/apis/gtfs/generated
+        working-directory: application/src/main/java/org/opentripplanner/apis/gtfs/generated
         run: |
           yarn install
           yarn generate
diff --git a/.github/workflows/debug-client.yml b/.github/workflows/debug-client.yml
index 6857b56b161..3c87e1c1b5c 100644
--- a/.github/workflows/debug-client.yml
+++ b/.github/workflows/debug-client.yml
@@ -76,8 +76,8 @@ jobs:
           git checkout dev-2.x
           git pull --rebase
           
-          CLIENT_HTML_OUTPUT=src/client/index.html
-          mkdir -p src/client/
+          CLIENT_HTML_OUTPUT=application/src/client/index.html
+          mkdir -p application/src/client/
           cp client/output/index.html ${CLIENT_HTML_OUTPUT}
           
           # just to debug