diff --git a/.gitmodules b/.gitmodules index 17f6a83..fabe8e5 100644 --- a/.gitmodules +++ b/.gitmodules @@ -15,7 +15,7 @@ url = git@github.com:opentargets/platform-api.git [submodule "platform-input-support"] path = platform-input-support - url = git@github.com:opentargets/platform-input-support.git + url = git@github.com:javfg/platform-input-support.git [submodule "OnToma"] path = OnToma url = git@github.com:opentargets/OnToma.git @@ -31,3 +31,12 @@ [submodule "platform-etl-backend"] path = platform-etl-backend url = git@github.com:opentargets/platform-etl-backend.git +[submodule "gentropy"] + path = gentropy + url = https://github.com/opentargets/gentropy.git +[submodule "ontoform"] + path = ontoform + url = https://github.com/opentargets/ontoform.git +[submodule "orchestration"] + path = orchestration + url = https://github.com/opentargets/orchestration.git diff --git a/README.md b/README.md index 7c994c3..17ae862 100644 --- a/README.md +++ b/README.md @@ -29,8 +29,11 @@ git submodule update --init --recursive - [ot-ui-apps](https://github.com/opentargets/ot-ui-apps) — Open Targets web applications - [platform-api](https://github.com/opentargets/platform-api) — Open Targets Platform API - [platform-input-support](https://github.com/opentargets/platform-input-support) — Open Targets input data acquisition application +- [ontoform](https://github.com/opentargets/ontoform) — Open Targets Input data transformations - [platform-etl-backend](https://github.com/opentargets/platform-etl-backend) — Open Targets Pipeline ETL process +- [gentropy](https://github.com/opentargets/gentropy) — Open Targets' genomics toolkit - [platform-output-support](https://github.com/opentargets/platform-output-support) — Open Targets output data generation application +- [orchestration](https://github.com/opentargets/orchestration) — Open Targets data pipelines orchestrator - [terraform-google-opentargets](https://github.com/opentargets/terraform-google-opentargets-platform) — Open Targets Infrastructure definition ## Copyright diff --git a/curation b/curation index 2049f1a..df91341 160000 --- a/curation +++ b/curation @@ -1 +1 @@ -Subproject commit 2049f1aafdcd21ae4c8f2e9457a7d25b121ff6dc +Subproject commit df913418278af93f8fa6eaece799a24cf0359701 diff --git a/evidence_datasource_parsers b/evidence_datasource_parsers index 53b8ba1..bdd0fc9 160000 --- a/evidence_datasource_parsers +++ b/evidence_datasource_parsers @@ -1 +1 @@ -Subproject commit 53b8ba1a4eddc009bac2b37ee99623a64639315d +Subproject commit bdd0fc99a5f4efaa0e66f8b86af3543c6d3f05ff diff --git a/gentropy b/gentropy new file mode 160000 index 0000000..3d14174 --- /dev/null +++ b/gentropy @@ -0,0 +1 @@ +Subproject commit 3d141749b57d8d9bf9e0b1d216f6cc79a4c10520 diff --git a/json_schema b/json_schema index 805f341..32734f4 160000 --- a/json_schema +++ b/json_schema @@ -1 +1 @@ -Subproject commit 805f341a631e207da56c5548c3e087a70595a6a2 +Subproject commit 32734f44cad9d8ed71625c65e4deea15932d0952 diff --git a/ontoform b/ontoform new file mode 160000 index 0000000..bfff4af --- /dev/null +++ b/ontoform @@ -0,0 +1 @@ +Subproject commit bfff4afafa5d16989bb2a6cd565543857feb88ab diff --git a/orchestration b/orchestration new file mode 160000 index 0000000..0bf13fb --- /dev/null +++ b/orchestration @@ -0,0 +1 @@ +Subproject commit 0bf13fb798063a33d32516417b80a3111501fcbd diff --git a/ot-ui-apps b/ot-ui-apps index ed305d2..952627b 160000 --- a/ot-ui-apps +++ b/ot-ui-apps @@ -1 +1 @@ -Subproject commit ed305d2fd0f2bbd48c4efca620bb1d243a2e4cc5 +Subproject commit 952627b5987f2767d15a02b602ac60c7c53ffccd diff --git a/platform-api b/platform-api index 5fbb0ad..e1a14cb 160000 --- a/platform-api +++ b/platform-api @@ -1 +1 @@ -Subproject commit 5fbb0ad3b2628ef06b7f6a1d24268aa639f36476 +Subproject commit e1a14cb61c064b2917df0a4917ba33240efc6990 diff --git a/platform-etl-backend b/platform-etl-backend index b873a2d..82093f8 160000 --- a/platform-etl-backend +++ b/platform-etl-backend @@ -1 +1 @@ -Subproject commit b873a2d4f77eb1b3302adeee3b3760749d80bdb2 +Subproject commit 82093f8b7b6bb56820d4b504b17646186bea2fb7 diff --git a/platform-input-support b/platform-input-support index b61ec2f..c8b92a2 160000 --- a/platform-input-support +++ b/platform-input-support @@ -1 +1 @@ -Subproject commit b61ec2fba5260bc56db7f5021400dd37eb4658b7 +Subproject commit c8b92a259d4dc9d483a6c83a9d08b1a0f23e6666 diff --git a/platform-output-support b/platform-output-support index ce1db3c..227eeeb 160000 --- a/platform-output-support +++ b/platform-output-support @@ -1 +1 @@ -Subproject commit ce1db3ccbd90fc83d383af6e088e181683e847ba +Subproject commit 227eeebe9a2c13d771f55052903e6092733130e2 diff --git a/terraform-google-opentargets-platform b/terraform-google-opentargets-platform index db143b4..f218f26 160000 --- a/terraform-google-opentargets-platform +++ b/terraform-google-opentargets-platform @@ -1 +1 @@ -Subproject commit db143b49a272e16759388aa7c3b0e81052d1b127 +Subproject commit f218f2649e08e0c4474733ed7571d61399ea9fe4