From 2f7a0ec53f698a63dae6d2630b5bc73c7d30d24f Mon Sep 17 00:00:00 2001
From: Daniel-Considine <113430683+Daniel-Considine@users.noreply.github.com>
Date: Fri, 22 Nov 2024 12:30:18 +0000
Subject: [PATCH] feat: changing to 95% file for finngen ingestion (#83)

---
 src/ot_orchestration/dags/config/finngen_ingestion.yaml | 3 +--
 1 file changed, 1 insertion(+), 2 deletions(-)

diff --git a/src/ot_orchestration/dags/config/finngen_ingestion.yaml b/src/ot_orchestration/dags/config/finngen_ingestion.yaml
index ce87be4..46f6aed 100644
--- a/src/ot_orchestration/dags/config/finngen_ingestion.yaml
+++ b/src/ot_orchestration/dags/config/finngen_ingestion.yaml
@@ -30,8 +30,7 @@ nodes:
       step: finngen_finemapping_ingestion
       step.finngen_finemapping_out: gs://finngen_data/r11/credible_set_datasets/susie
       step.finngen_susie_finemapping_snp_files: gs://finngen-public-data-r11/finemap/full/susie/*.snp.bgz
-      # As directory contains SUSIE.cred.summary.tsv, SUSIE_99.cred.summary.tsv ensure only non 99 credible sets are ingested,
-      step.finngen_susie_finemapping_cs_summary_files: gs://finngen-public-data-r11/finemap/summary/*SUSIE_99.cred.summary.tsv
+      step.finngen_susie_finemapping_cs_summary_files: gs://finngen-public-data-r11/finemap/summary/*SUSIE.cred.summary.tsv
       step.finngen_finemapping_lead_pvalue_threshold: 1e-5
       step.finngen_release_prefix: FINNGEN_R11
       step.session.start_hail: true