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RandomAccess.c
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RandomAccess.c
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/* -*- mode: C; tab-width: 2; indent-tabs-mode: nil; -*- */
/*
* This code has been contributed by the DARPA HPCS program. Contact
* David Koester <[email protected]> or Bob Lucas <[email protected]>
* if you have questions.
*
*
* GUPS (Giga UPdates per Second) is a measurement that profiles the memory
* architecture of a system and is a measure of performance similar to MFLOPS.
* The HPCS HPCchallenge RandomAccess benchmark is intended to exercise the
* GUPS capability of a system, much like the LINPACK benchmark is intended to
* exercise the MFLOPS capability of a computer. In each case, we would
* expect these benchmarks to achieve close to the "peak" capability of the
* memory system. The extent of the similarities between RandomAccess and
* LINPACK are limited to both benchmarks attempting to calculate a peak system
* capability.
*
* GUPS is calculated by identifying the number of memory locations that can be
* randomly updated in one second, divided by 1 billion (1e9). The term "randomly"
* means that there is little relationship between one address to be updated and
* the next, except that they occur in the space of one half the total system
* memory. An update is a read-modify-write operation on a table of 64-bit words.
* An address is generated, the value at that address read from memory, modified
* by an integer operation (add, and, or, xor) with a literal value, and that
* new value is written back to memory.
*
* We are interested in knowing the GUPS performance of both entire systems and
* system subcomponents --- e.g., the GUPS rating of a distributed memory
* multiprocessor the GUPS rating of an SMP node, and the GUPS rating of a
* single processor. While there is typically a scaling of FLOPS with processor
* count, a similar phenomenon may not always occur for GUPS.
*
* Select the memory size to be the power of two such that 2^n <= 1/2 of the
* total memory. Each CPU operates on its own address stream, and the single
* table may be distributed among nodes. The distribution of memory to nodes
* is left to the implementer. A uniform data distribution may help balance
* the workload, while non-uniform data distributions may simplify the
* calculations that identify processor location by eliminating the requirement
* for integer divides. A small (less than 1%) percentage of missed updates
* are permitted.
*
* When implementing a benchmark that measures GUPS on a distributed memory
* multiprocessor system, it may be required to define constraints as to how
* far in the random address stream each node is permitted to "look ahead".
* Likewise, it may be required to define a constraint as to the number of
* update messages that can be stored before processing to permit multi-level
* parallelism for those systems that support such a paradigm. The limits on
* "look ahead" and "stored updates" are being implemented to assure that the
* benchmark meets the intent to profile memory architecture and not induce
* significant artificial data locality. For the purpose of measuring GUPS,
* we will stipulate that each thread is permitted to look ahead no more than
* 1024 random address stream samples with the same number of update messages
* stored before processing.
*
* The supplied MPI-1 code generates the input stream {A} on all processors
* and the global table has been distributed as uniformly as possible to
* balance the workload and minimize any Amdahl fraction. This code does not
* exploit "look-ahead". Addresses are sent to the appropriate processor
* where the table entry resides as soon as each address is calculated.
* Updates are performed as addresses are received. Each message is limited
* to a single 64 bit long integer containing element ai from {A}.
* Local offsets for T[ ] are extracted by the destination processor.
*
* If the number of processors is equal to a power of two, then the global
* table can be distributed equally over the processors. In addition, the
* processor number can be determined from that portion of the input stream
* that identifies the address into the global table by masking off log2(p)
* bits in the address.
*
* If the number of processors is not equal to a power of two, then the global
* table cannot be equally distributed between processors. In the MPI-1
* implementation provided, there has been an attempt to minimize the differences
* in workloads and the largest difference in elements of T[ ] is one. The
* number of values in the input stream generated by each processor will be
* related to the number of global table entries on each processor.
*
* The MPI-1 version of RandomAccess treats the potential instance where the
* number of processors is a power of two as a special case, because of the
* significant simplifications possible because processor location and local
* offset can be determined by applying masks to the input stream values.
* The non power of two case uses an integer division to determine the processor
* location. The integer division will be more costly in terms of machine
* cycles to perform than the bit masking operations
*
* For additional information on the GUPS metric, the HPCchallenge RandomAccess
* Benchmark,and the rules to run RandomAccess or modify it to optimize
* performance -- see http://icl.cs.utk.edu/hpcc/
*
*/
/* Jan 2005
*
* This code has been modified to allow local bucket sorting of updates.
* The total maximum number of updates in the local buckets of a process
* is currently defined in "RandomAccess.h" as MAX_TOTAL_PENDING_UPDATES.
* When the total maximum number of updates is reached, the process selects
* the bucket (or destination process) with the largest number of
* updates and sends out all the updates in that bucket. See buckets.c
* for details about the buckets' implementation.
*
* This code also supports posting multiple MPI receive descriptors (based
* on a contribution by David Addison).
*
* In addition, this implementation provides an option for limiting
* the execution time of the benchmark to a specified time bound
* (see time_bound.c). The time bound is currently defined in
* time_bound.h, but it should be a benchmark parameter. By default
* the benchmark will execute the recommended number of updates,
* that is, four times the global table size.
*/
/*
* OpenSHMEM version:
*
* Copyright (c) 2011 - 2015
* University of Houston System and UT-Battelle, LLC.
*
* All rights reserved.
*
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions
* are met:
*
* o Redistributions of source code must retain the above copyright notice,
* this list of conditions and the following disclaimer.
*
* o Redistributions in binary form must reproduce the above copyright
* notice, this list of conditions and the following disclaimer in the
* documentation and/or other materials provided with the distribution.
*
* o Neither the name of the University of Houston System,
* UT-Battelle, LLC. nor the names of its contributors may be used to
* endorse or promote products derived from this software without specific
* prior written permission.
*
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
* "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT
* LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR
* A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT
* HOLDER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
* SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED
* TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR
* PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF
* LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING
* NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
* SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
*
*/
#include <hpcc.h>
#include "RandomAccess.h"
#include <stdio.h>
#include <shmem.h>
/* Allocate main table (in global memory) */
u64Int *HPCC_Table;
u64Int LocalSendBuffer[LOCAL_BUFFER_SIZE];
u64Int LocalRecvBuffer[MAX_RECV*LOCAL_BUFFER_SIZE];
int
HPCC_SHMEMRandomAccess(HPCC_Params *params) {
s64Int i;
static s64Int NumErrors, GlbNumErrors;
int NumProcs, logNumProcs, MyProc;
u64Int GlobalStartMyProc;
int Remainder; /* Number of processors with (LocalTableSize + 1) entries */
u64Int Top; /* Number of table entries in top of Table */
s64Int LocalTableSize; /* Local table width */
u64Int MinLocalTableSize; /* Integer ratio TableSize/NumProcs */
u64Int logTableSize, TableSize;
double CPUTime; /* CPU time to update table */
double RealTime; /* Real time to update table */
double TotalMem;
static int sAbort, rAbort;
int PowerofTwo;
double timeBound = -1; /* OPTIONAL time bound for execution time */
u64Int NumUpdates_Default; /* Number of updates to table (suggested: 4x number of table entries) */
u64Int NumUpdates; /* actual number of updates to table - may be smaller than
* NumUpdates_Default due to execution time bounds */
s64Int ProcNumUpdates; /* number of updates per processor */
#ifdef RA_TIME_BOUND
s64Int GlbNumUpdates; /* for reduction */
#endif
static long llpSync[_SHMEM_BCAST_SYNC_SIZE];
static long long int llpWrk[_SHMEM_REDUCE_SYNC_SIZE];
static long ipSync[_SHMEM_BCAST_SYNC_SIZE];
static int ipWrk[_SHMEM_REDUCE_SYNC_SIZE];
FILE *outFile = NULL;
double *GUPs;
double *temp_GUPs;
int numthreads;
for (i = 0; i < _SHMEM_BCAST_SYNC_SIZE; i += 1){
ipSync[i] = _SHMEM_SYNC_VALUE;
llpSync[i] = _SHMEM_SYNC_VALUE;
}
params->SHMEMGUPs = -1;
GUPs = ¶ms->SHMEMGUPs;
NumProcs = shmem_n_pes();
MyProc = shmem_my_pe();
if (0 == MyProc) {
outFile = stdout;
setbuf(outFile, NULL);
}
params->HPLMaxProcMem = 200000;
TotalMem = params->HPLMaxProcMem; /* max single node memory */
TotalMem *= NumProcs; /* max memory in NumProcs nodes */
TotalMem /= sizeof(u64Int);
/* calculate TableSize --- the size of update array (must be a power of 2) */
for (TotalMem *= 0.5, logTableSize = 0, TableSize = 1;
TotalMem >= 1.0;
TotalMem *= 0.5, logTableSize++, TableSize <<= 1)
; /* EMPTY */
/* determine whether the number of processors is a power of 2 */
if ( (NumProcs & (NumProcs -1)) == 0) {
PowerofTwo = HPCC_TRUE;
Remainder = 0;
Top = 0;
MinLocalTableSize = (TableSize / NumProcs);
LocalTableSize = MinLocalTableSize;
GlobalStartMyProc = (MinLocalTableSize * MyProc);
}
else {
if(MyProc == 0) {
printf("Number of processes must be power of 2\n");
}
return 0;
}
sAbort = 0;
HPCC_Table = HPCC_XMALLOC( s64Int, LocalTableSize );
if (! HPCC_Table) sAbort = 1;
shmem_barrier_all();
shmem_int_sum_to_all(&rAbort, &sAbort, 1, 0, 0, NumProcs, ipWrk, ipSync);
shmem_barrier_all();
if (rAbort > 0) {
if (MyProc == 0) fprintf(outFile, "Failed to allocate memory for the main table.\n");
/* check all allocations in case there are new added and their order changes */
if (HPCC_Table) HPCC_free( HPCC_Table );
goto failed_table;
}
params->SHMEMRandomAccess_N = (s64Int)TableSize;
/* Default number of global updates to table: 4x number of table entries */
NumUpdates_Default = 4 * TableSize;
ProcNumUpdates = 4*LocalTableSize;
NumUpdates = NumUpdates_Default;
if (MyProc == 0) {
fprintf( outFile, "Running on %d processors%s\n", NumProcs, PowerofTwo ? " (PowerofTwo)" : "");
fprintf( outFile, "Total Main table size = 2^" FSTR64 " = " FSTR64 " words\n",
logTableSize, TableSize );
if (PowerofTwo)
fprintf( outFile, "PE Main table size = 2^" FSTR64 " = " FSTR64 " words/PE\n",
(logTableSize - logNumProcs), TableSize/NumProcs );
else
fprintf( outFile, "PE Main table size = (2^" FSTR64 ")/%d = " FSTR64 " words/PE MAX\n",
logTableSize, NumProcs, LocalTableSize);
fprintf( outFile, "Default number of updates (RECOMMENDED) = " FSTR64 "\n", NumUpdates_Default);
params->SHMEMRandomAccess_ExeUpdates = NumUpdates;
}
/* Initialize main table */
for (i=0; i<LocalTableSize; i++)
HPCC_Table[i] = i + GlobalStartMyProc;
shmem_barrier_all();
RealTime = -RTSEC();
Power2NodesRandomAccessUpdate(logTableSize, TableSize, LocalTableSize,
MinLocalTableSize, GlobalStartMyProc, Top,
logNumProcs, NumProcs, Remainder,
MyProc, ProcNumUpdates);
shmem_barrier_all();
/* End timed section */
RealTime += RTSEC();
/* Print timing results */
if (MyProc == 0){
params->SHMEMRandomAccess_time = RealTime;
*GUPs = 1e-9*NumUpdates / RealTime;
fprintf( outFile, "Real time used = %.6f seconds\n", RealTime );
fprintf( outFile, "%.9f Billion(10^9) Updates per second [GUP/s]\n",
*GUPs );
fprintf( outFile, "%.9f Billion(10^9) Updates/PE per second [GUP/s]\n",
*GUPs / NumProcs );
/* No longer reporting per CPU number */
/* *GUPs /= NumProcs; */
}
/* distribute result to all nodes */
temp_GUPs = GUPs;
shmem_barrier_all();
shmem_broadcast64(GUPs,temp_GUPs,1,0,0,0,NumProcs,llpSync);
shmem_barrier_all();
/* Verification phase */
/* Begin timing here */
RealTime = -RTSEC();
HPCC_Power2NodesSHMEMRandomAccessCheck(logTableSize, TableSize, LocalTableSize,
GlobalStartMyProc,
logNumProcs, NumProcs,
MyProc, ProcNumUpdates,
&NumErrors);
shmem_barrier_all();
shmem_longlong_sum_to_all( &GlbNumErrors, &NumErrors, 1, 0,0, NumProcs,llpWrk, llpSync);
shmem_barrier_all();
/* End timed section */
RealTime += RTSEC();
if(MyProc == 0){
params->SHMEMRandomAccess_CheckTime = RealTime;
fprintf( outFile, "Verification: Real time used = %.6f seconds\n", RealTime);
fprintf( outFile, "Found " FSTR64 " errors in " FSTR64 " locations (%s).\n",
GlbNumErrors, TableSize, (GlbNumErrors <= 0.01*TableSize) ?
"passed" : "failed");
if (GlbNumErrors > 0.01*TableSize) params->Failure = 1;
params->SHMEMRandomAccess_Errors = (s64Int)GlbNumErrors;
params->SHMEMRandomAccess_ErrorsFraction = (double)GlbNumErrors / (double)TableSize;
params->SHMEMRandomAccess_Algorithm = 1;
}
/* End verification phase */
/* Deallocate memory (in reverse order of allocation which should
help fragmentation) */
HPCC_free( HPCC_Table );
failed_table:
if (0 == MyProc) if (outFile != stderr) fclose( outFile );
shmem_barrier_all();
return 0;
}