diff --git a/joss.06838/10.21105.joss.06838.crossref.xml b/joss.06838/10.21105.joss.06838.crossref.xml
new file mode 100644
index 0000000000..c8a443b6b5
--- /dev/null
+++ b/joss.06838/10.21105.joss.06838.crossref.xml
@@ -0,0 +1,168 @@
+
+
+
+ 20241024201721-845f753a2a2f11c7ded75dba34055b6aed22b2a0
+ 20241024201721
+
+ JOSS Admin
+ admin@theoj.org
+
+ The Open Journal
+
+
+
+
+ Journal of Open Source Software
+ JOSS
+ 2475-9066
+
+ 10.21105/joss
+ https://joss.theoj.org
+
+
+
+
+ 10
+ 2024
+
+
+ 9
+
+ 102
+
+
+
+ DRDMannTurb: A Python package for scalable, data-driven
+synthetic turbulence
+
+
+
+ Alexey
+ Izmailov
+
+
+ Matthew
+ Meeker
+
+
+ Georgios
+ Deskos
+
+
+ Brendan
+ Keith
+
+
+
+ 10
+ 24
+ 2024
+
+
+ 6838
+
+
+ 10.21105/joss.06838
+
+
+ http://creativecommons.org/licenses/by/4.0/
+ http://creativecommons.org/licenses/by/4.0/
+ http://creativecommons.org/licenses/by/4.0/
+
+
+
+ Software archive
+ https://dx.doi.org/10.5281/zenodo.13922330
+
+
+ GitHub review issue
+ https://github.com/openjournals/joss-reviews/issues/6838
+
+
+
+ 10.21105/joss.06838
+ https://joss.theoj.org/papers/10.21105/joss.06838
+
+
+ https://joss.theoj.org/papers/10.21105/joss.06838.pdf
+
+
+
+
+
+ Learning the structure of wind: A data-driven
+nonlocal turbulence model for the atmospheric boundary
+layer
+ Keith
+ Physics of Fluids
+ 9
+ 33
+ 10.1063/5.0064394
+ 2021
+ Keith, B., Khristenko, U., &
+Wohlmuth, B. (2021). Learning the structure of wind: A data-driven
+nonlocal turbulence model for the atmospheric boundary layer. Physics of
+Fluids, 33(9). https://doi.org/10.1063/5.0064394
+
+
+ Mann.rs
+ Liew, J.
+ 10.5281/zenodo.7254149
+ 2022
+ Liew, J. (2022). Mann.rs (Version
+1.0.0). https://doi.org/10.5281/zenodo.7254149
+
+
+ Implementation of the blade element momentum
+model on a polar grid and its aeroelastic load impact
+ Madsen
+ Wind Energy Science
+ 5
+ 10.5194/wes-5-1-2020
+ 2020
+ Madsen, H. A., Larsen, T. J.,
+Pirrung, G. R., Li, A., & Zahle, F. (2020). Implementation of the
+blade element momentum model on a polar grid and its aeroelastic load
+impact. Wind Energy Science, 5, 1–27.
+https://doi.org/10.5194/wes-5-1-2020
+
+
+ The spatial structure of neutral atmospheric
+surface-layer turbulence
+ Mann
+ Journal of Fluid Mechanics
+ 273
+ 10.1017/S0022112094001886
+ 1994
+ Mann, J. (1994). The spatial
+structure of neutral atmospheric surface-layer turbulence. Journal of
+Fluid Mechanics, 273, 141–168.
+https://doi.org/10.1017/S0022112094001886
+
+
+ Wind field simulation
+ Mann
+ Probabilistic Engineering
+Mechanics
+ 4
+ 13
+ 10.1016/S0266-8920(97)00036-2
+ 0266-8920
+ 1998
+ Mann, J. (1998). Wind field
+simulation. Probabilistic Engineering Mechanics, 13(4), 269–282.
+https://doi.org/10.1016/S0266-8920(97)00036-2
+
+
+
+
+
+
diff --git a/joss.06838/10.21105.joss.06838.pdf b/joss.06838/10.21105.joss.06838.pdf
new file mode 100644
index 0000000000..12d9873a5c
Binary files /dev/null and b/joss.06838/10.21105.joss.06838.pdf differ
diff --git a/joss.06838/paper.jats/10.21105.joss.06838.jats b/joss.06838/paper.jats/10.21105.joss.06838.jats
new file mode 100644
index 0000000000..d40f454211
--- /dev/null
+++ b/joss.06838/paper.jats/10.21105.joss.06838.jats
@@ -0,0 +1,321 @@
+
+
+
+
+
+
+
+Journal of Open Source Software
+JOSS
+
+2475-9066
+
+Open Journals
+
+
+
+6838
+10.21105/joss.06838
+
+DRDMannTurb: A Python package for scalable, data-driven
+synthetic turbulence
+
+
+
+
+Izmailov
+Alexey
+
+
+
+
+
+Meeker
+Matthew
+
+
+
+
+
+Deskos
+Georgios
+
+
+
+
+
+Keith
+Brendan
+
+
+
+
+
+Division of Applied Mathematics, Brown University,
+Providence, RI, 02912, USA
+
+
+
+
+National Wind Technology Center, National Renewable Energy
+Laboratory, Golden, CO, 80401, USA
+
+
+
+
+12
+7
+2024
+
+9
+102
+6838
+
+Authors of papers retain copyright and release the
+work under a Creative Commons Attribution 4.0 International License (CC
+BY 4.0)
+2022
+The article authors
+
+Authors of papers retain copyright and release the work under
+a Creative Commons Attribution 4.0 International License (CC BY
+4.0)
+
+
+
+Python
+Torch
+Mann-model
+wind-engineering
+
+
+
+
+
+ Summary
+
Synthetic turbulence models (STMs) are used in wind engineering to
+ generate realistic flow fields and are employed as inputs to
+ industrial wind simulations. Examples include prescribing inlet
+ conditions in large eddy simulations that model loads on wind turbines
+ and tall buildings. We are interested in STMs capable of generating
+ fluctuations based on prescribed second-moment statistics since such
+ models can simulate environmental conditions that closely resemble
+ on-site observations. To this end, the widely used Mann model (see
+ Mann,
+ 1994,
+ 1998)
+ is the inspiration for DRDMannTurb. The Mann
+ model is described by three physical parameters: a magnitude parameter
+ influencing the global variance of the wind field and corresponding to
+ the Kolmogorov constant multiplied by the rate of viscous dissipation
+ of the turbulent kinetic energy to the two-thirds,
+
+
+ αϵ2/3,
+ a turbulence length scale parameter
+
+ L,
+ and a non-dimensional parameter
+
+ Γ
+ related to the lifetime of the eddies. A number of studies, as well as
+ international standards (e.g., those by the International
+ Electrotechnical Commission (IEC)), include recommended values for
+ these three parameters with the goal of standardizing wind simulations
+ according to observed energy spectra. Yet, having only three
+ parameters, the Mann model faces limitations in accurately
+ representing the diversity of observable spectra. This Python package
+ enables users to extend the Mann model and more accurately fit field
+ measurements through flexible neural network models of the eddy
+ lifetime function. Following Keith et al.
+ (2021),
+ we refer to this class of models as Deep Rapid Distortion (DRD)
+ models. DRDMannTurb also includes a general
+ module implementing an efficient method for synthetic turbulence
+ generation based on a domain decomposition technique. This technique
+ is also described in Keith et al.
+ (2021).
+
+
+ Statement of need
+
DRDMannTurb aims to provide an easy-to-use
+ framework to (1) fit one-point spectra from data using the DRD model
+ introduced in Keith et al.
+ (2021)
+ and (2) efficiently generate synthetic turbulence velocity fields to
+ be used by scientists and engineers in downstream tasks. Existing
+ methodologies for generating synthetic turbulence frequently incur a
+ large computational overhead and lack DRD models’ flexibility to
+ represent the diverse spectral properties of real-world observations,
+ cf.
+ (Liew,
+ J., 2022). DRDMannTurb addresses these
+ two issues by introducing (1) a module for fitting DRD models to
+ observed one-point spectra data, as well as (2) a module for
+ efficiently generating synthetic turbulence boxes. Rather than
+ generating turbulence over an entire domain at once, which can end up
+ being a highly memory-intensive practice,
+ DRDMannTurb uses a domain decomposition
+ approach to generate smaller sub-boxes sequentially.
+
DRDMannTurb is written in Python and
+ leverages computationally powerful backend packages like
+ NumPy and PyTorch. The
+ implementation makes DRD models easily portable to GPU and other
+ backends via PyTorch. This is an additional
+ advantage compared to other software packages that implement the Mann
+ model, but for which the source code may not be public or freely
+ available (e.g., HAWC2
+ (Madsen
+ et al., 2020)). Finally, DRDMannTurb is
+ designed to be more general-purpose, allowing it to be applied to a
+ broader range of scenarios and to be very accessible, with clear
+ documentation and examples spanning a variety of tasks that
+ researchers may be interested in.
+
+
+ Results
+
The output of the fitting component of
+ DRDMannTurb consists of two parts: the spectra
+ fit by a DRD model and the learned eddy lifetime function. For
+ example, in the case of the Kaimal spectra, the DRD spectra fit is
+ more accurate than the Mann uniform shear model while providing an
+ estimate of the same three physical parameters.
+
+
DRD model fit to the Kaimal spectra.
+
+
+
After fitting to the spectra, the resulting models can also be used
+ to generate 3D wind fields with spectra more closely resembling the
+ same observations used in training.
+
+
Synthetic wind field.
+
+
+
For more detailed discussions of results, including a variety of
+ utilities for interpolating and filtering noisy real-world data and
+ generating wind turbulence; please see the
+ official
+ examples.
+
+
+ Package Features
+
+
+
Calibrate the Mann model parameters using reference “textbook”
+ or in situ spectra and co-spectra
+
+
+
Calibrate the DRD model using a flexible suite of neural
+ network architectures for the eddy lifetime functions
+
+
+
Generate synthetic turbulence fields using the classical Mann
+ model
+
+
+
Use a state-of-the-art domain decomposition approach for fast
+ synthetic turbulence generation
+
+
+
+
+ Acknowledgements
+
This work was authored in part by the National Renewable Energy
+ Laboratory, operated by Alliance for Sustainable Energy, LLC, for the
+ U.S. Department of Energy (DOE) under Contract No. DE-AC36-08GO28308.
+ Funding provided by the U.S. Department of Energy Office of Energy
+ Efficiency and Renewable Energy Wind Energy Technologies Office. The
+ views expressed in the article do not necessarily represent the views
+ of the DOE or the U.S. Government. The U.S. Government retains and the
+ publisher, by accepting the article for publication, acknowledges that
+ the U.S. Government retains a nonexclusive, paid-up, irrevocable,
+ worldwide license to publish or reproduce the published form of this
+ work, or allow others to do so, for U.S. Government purposes. BK was
+ supported in part by the U.S. Department of Energy Office of Science,
+ Early Career Research Program under Award Number DE-SC0024335.
+
+
+
+
+
+
+
+
+ KeithB.
+ KhristenkoU.
+ WohlmuthB.
+
+ Learning the structure of wind: A data-driven nonlocal turbulence model for the atmospheric boundary layer
+
+ AIP Publishing
+ 202109
+ 33
+ 9
+ https://doi.org/10.1063%2F5.0064394
+ 10.1063/5.0064394
+
+
+
+
+
+ Liew, J.
+
+ Mann.rs
+ 2022
+ https://github.com/jaimeliew1/Mann.rs
+ 10.5281/zenodo.7254149
+
+
+
+
+
+ MadsenH. A.
+ LarsenT. J.
+ PirrungG. R.
+ LiA.
+ ZahleF.
+
+ Implementation of the blade element momentum model on a polar grid and its aeroelastic load impact
+
+ 2020
+ 5
+ https://wes.copernicus.org/articles/5/1/2020/
+ 10.5194/wes-5-1-2020
+ 1
+ 27
+
+
+
+
+
+ MannJakob
+
+ The spatial structure of neutral atmospheric surface-layer turbulence
+
+ 1994
+ 273
+ 10.1017/S0022112094001886
+ 141
+ 168
+
+
+
+
+
+ MannJakob
+
+ Wind field simulation
+
+ 1998
+ 13
+ 4
+ 0266-8920
+ 10.1016/S0266-8920(97)00036-2
+ 269
+ 282
+
+
+
+
+
diff --git a/joss.06838/paper.jats/synthetic_fit.png b/joss.06838/paper.jats/synthetic_fit.png
new file mode 100644
index 0000000000..27bb54f1a1
Binary files /dev/null and b/joss.06838/paper.jats/synthetic_fit.png differ
diff --git a/joss.06838/paper.jats/wind.png b/joss.06838/paper.jats/wind.png
new file mode 100644
index 0000000000..e4addb757f
Binary files /dev/null and b/joss.06838/paper.jats/wind.png differ