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specification.yml
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specification.yml
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description: This Container profile specification presents a representation of a Container
such as Docker or Singularity that is used in scientific compute.
edit_url: https://github.com/openschemas/specifications/tree/master/ContainerImage/specification.html
gh_folder: https://github.com/openschemas/specifications/tree/master/ContainerImage
gh_tasks: https://github.com/openschemas/specifications/labels/type%3A%20ContainerImage
hierarchy: [Thing, CreativeWork, SoftwareSourceCode]
mapping:
- bsc_description: ''
cardinality: MANY
controlled_vocab: ''
description: An alias for the item.
example: ''
expected_types: [Text]
marginality: Recommended
parent: Thing
property: alternateName
type: ''
type_url: ''
- bsc_description: Type of software e.g. database, tool, service. **Note:** Bioschemas
have removed [URL](http://schema.org/URL) from the Expected Types.
cardinality: MANY
controlled_vocab: Please indicate the container technology in all lowercase
description: Type of software application, e.g. 'Game, Multimedia'.
example: '{ "@type": ["SoftwareApplication", "Container"], "applicationCategory":
"singularity" }'
expected_types: [Text]
marginality: Optional
parent: ContainerImage
property: applicationCategory
type: ''
type_url: ''
- bsc_description: The command for a ContainerImage is typically a set of extra arguments
that are added to the entrypoint in a default running scenario
cardinality: MANY
controlled_vocab: ''
description: The command for a ContainerImage is typically a set of extra arguments
that are added to the entrypoint in a default running scenario
example: ''
expected_types: [Text]
marginality: Recommended
parent: ContainerImage
property: brands
type: ''
type_url: ''
- bsc_description: a special list of keywords to describe the underlying technologies
(e.g., Docker) that the container recipe affords building.
cardinality: MANY
controlled_vocab: ''
description: a special list of keywords to describe the underlying technologies
(e.g., Docker) that the container recipe affords building.
example: ''
expected_types: [Text]
marginality: Recommended
parent: ContainerImage
property: brands
type: ''
type_url: ''
- bsc_description: Publication about this software.
cardinality: MANY
controlled_vocab: ''
description: A citation or reference to another creative work, such as another publication,
web page, scholarly article, etc.
example: '{ "@type": ["SoftwareApplication", "Tool"], "citation": "https://dx.doi.org/10.1016/S0022-2836(05)80360-2"
}'
expected_types: [CreativeWork, Text]
marginality: Recommended
parent: CreativeWork
property: citation
type: ''
type_url: ''
- bsc_description: A ContainerImage is the binary or associated shasum that references
a particular grouping of layers to form a complete images.
cardinality: ONE
controlled_vocab: ''
description: A ContainerImage is the binary or associated shasum that references
a particular grouping of layers to form a complete images.
example: ''
expected_types: [ContainerImage]
marginality: Recommended
parent: ContainerImage
property: ContainerImage
type: ''
type_url: ''
- bsc_description: ''
cardinality: ONE
controlled_vocab: ''
description: The date on which the CreativeWork was created or the item was added
to a DataFeed.
example: '{ "@type": ["SoftwareApplication", "Tool"], "dateCreated": "2108-06-13"
}'
expected_types: [Date, DateTime]
marginality: Optional
parent: CreativeWork
property: dateCreated
type: ''
type_url: ''
- bsc_description: ''
cardinality: ONE
controlled_vocab: ''
description: The date on which the CreativeWork was most recently modified or when
the item's entry was modified within a DataFeed.
example: '{ "@type": ["SoftwareApplication", "Tool"], "dateModified": "2108-08-07"
}'
expected_types: [Date, DateTime]
marginality: Optional
parent: CreativeWork
property: dateModified
type: ''
type_url: ''
- bsc_description: a linux container
cardinality: ONE
controlled_vocab: ''
description: A description of the item.
example: ''
expected_types: [Text]
marginality: Minimum
parent: Thing
property: description
type: ''
type_url: ''
- bsc_description: ''
cardinality: MANY
controlled_vocab: ''
description: If the file can be downloaded, URL to download the binary. For containers
without an exposed wget url or similar, this can be the pull command.
example: '{ "@type": ["SoftwareApplication", "Tool"], "downloadURL": "https://github.com/sacdallago/cellmap"
}'
expected_types: [URL]
marginality: Optional
parent: ContainerImage
property: downloadUrl
type: ''
type_url: ''
- bsc_description: The entrypoint is the executable that is called within the container
when the user executes it, typically via a "run" or equivalent command.
cardinality: MANY
controlled_vocab: ''
description: The entrypoint is the executable that is called within the container
when the user executes it, typically via a "run" or equivalent command.
example: ''
expected_types: [Text]
marginality: Recommended
parent: ContainerImage
property: entrypoint
type: ''
type_url: ''
- bsc_description: Please choose values from [EDAM:Operation](http://edamontology.org/operation_0004).
cardinality: MANY
controlled_vocab: '[EDAM:Operation](http://edamontology.org/operation_0004)'
description: Features or modules provided by this application (and possibly required
by other applications).
example: '{ "@type": ["SoftwareApplication", "Tool"], "featureList": ["http://edamontology.org/topic_0821",
"http://edamontology.org/topic_0128"] }'
expected_types: [Text, URL]
marginality: Minimum
parent: ContainerImage
property: featureList
type: ''
type_url: ''
- bsc_description: Used to describe tools included into suites/bundles/workflows.
cardinality: MANY
controlled_vocab: ''
description: Indicates an item or CreativeWork that is part of this item, or CreativeWork
(in some sense).
example: ''
expected_types: [CreativeWork]
marginality: Optional
parent: CreativeWork
property: hasPart
type: ''
type_url: ''
- bsc_description: A help section is not present for all container technologies, but
is typically a blurb of text that can be shown to the user to give detais about
runtime usage or similar.
cardinality: ONE
controlled_vocab: ''
description: A help section is not present for all container technologies, but is
typically a blurb of text that can be shown to the user to give detais about runtime
usage or similar.
example: ''
expected_types: [Text]
marginality: Recommended
parent: ContainerImage
property: help
type: ''
type_url: ''
- bsc_description: Unique identifier for the container, typically corresponding to
a uri to designate a registry source
cardinality: ONE
controlled_vocab: ''
description: The identifier property represents any kind of identifier for any kind
of <a class="localLink" href="http://schema.org/Thing">Thing</a>, such as ISBNs,
GTIN codes, UUIDs etc. Schema.org provides dedicated properties for representing
many of these, either as textual strings or as URL (URI) links. See <a href="http://schema.org/docs/datamodel.html#identifierBg">background
notes</a> for more details.
example: <username>/<repository>:<tag>@<hash>
expected_types: [PropertyValue, Text, URL]
marginality: Recommended
parent: Thing
property: identifier
type: ''
type_url: ''
- bsc_description: The input format of the data. Must be one of the [EDAM:Data](http://edamontology.org/data_0006)
concept labels or one of its synonyms.
cardinality: MANY
controlled_vocab: '[EDAM:Data](http://edamontology.org/data_0006)'
description: ''
example: '{ "@type": ["SoftwareApplication", "Tool"], "input": ["http://edamontology.org/data_2977",
"http://edamontology.org/data_2976"] }'
expected_types: [URL]
marginality: Recommended
parent: ContainerImage
property: input
type: external
type_url: http://semanticscience.org/resource/SIO_000230
- bsc_description: ''
cardinality: ONE
controlled_vocab: '[EDAM:Topic](http://edamontology.org/topic_0003)'
description: Keywords or tags used to describe this content. Multiple entries in
a keywords list are typically delimited by commas.
example: '{ "@type": ["SoftwareApplication", "Tool"], "ketwords": "Biology, chemistry,
medicine" }'
expected_types: [Text]
marginality: Optional
parent: CreativeWork
property: keywords
type: ''
type_url: ''
- bsc_description: a list of keywords to describe the ContainerImage that the ContainerImage
will build
cardinality: MANY
controlled_vocab: ''
description: Keywords or tags used to describe this content. Multiple entries in
a keywords list are typically delimited by commas.
example: ''
expected_types: [Text]
marginality: Recommended
parent: CreativeWork
property: keywords
type: ''
type_url: ''
- bsc_description: Labels are a list of key, value pairs that encompass named metadata
for the container.
cardinality: MANY
controlled_vocab: ''
description: A list of environment variables found in the recipe.
example: ''
expected_types: [Text]
marginality: Recommended
parent: ContainerImage
property: environment
type: ''
type_url: ''
- bsc_description: Labels are a list of key, value pairs that encompass named metadata
for the container.
cardinality: MANY
controlled_vocab: ''
description: Labels are a list of key, value pairs that encompass named metadata
for the container.
example: ''
expected_types: [Text]
marginality: Recommended
parent: ContainerImage
property: labels
type: ''
type_url: ''
- bsc_description: The applicable software license. **Note:** Bioschemas have changed
the Expected Types to [URL](http://schema.org/URL) or [Text](http://schema.org/Text).
cardinality: MANY
controlled_vocab: ''
description: A license document that applies to this content, typically indicated
by URL.
example: '{ "@type": ["SoftwareApplication", "Tool"], "license": "https://www.apache.org/licenses/LICENSE-2.0"
}'
expected_types: [Text, URL]
marginality: Recommended
parent: CreativeWork
property: license
type: ''
type_url: ''
- bsc_description: ''
cardinality: ONE
controlled_vocab: ''
description: The name of the item.
example: ''
expected_types: [Text]
marginality: Minimum
parent: Thing
property: name
type: ''
type_url: ''
- bsc_description: Operating systems on which the container runs, typically Linux
derivatives and (for some containers) Windows.
cardinality: MANY
controlled_vocab: ''
description: Operating systems supported (Windows 7, OSX 10.6, Android 1.6).
example: '{ "@type": ["SoftwareApplication", "Tool"], "operatingSystem": ["Windows
7 or above", "Linux/Unix", "Mac/Apple"] }'
expected_types: [Text]
marginality: Optional
parent: ContainerImage
property: operatingSystem
type: ''
type_url: ''
- bsc_description: The output format of the data. Must be one of the [EDAM:Data](http://edamontology.org/data_0006)
concept labels or one of its synonyms.
cardinality: MANY
controlled_vocab: '[EDAM:Data](http://edamontology.org/data_0006)'
description: ''
example: '{ "@type": ["SoftwareApplication", "Tool"], "input": ["http://edamontology.org/data_1383",
"http://edamontology.org/data_1384"] }'
expected_types: [URL]
marginality: Recommended
parent: ContainerImage
property: output
type: external
type_url: http://semanticscience.org/resource/SIO_000229
- bsc_description: ''
cardinality: MANY
controlled_vocab: ''
description: The publisher of the creative work.
example: '{ "@type": ["SoftwareApplication", "Tool"], "publisher": { "@type":
"Organization", "name": "National Center for Biotechnology Information National
Library of Medicine", "alternatName": "NCBI NLM" } }'
expected_types: [Organization, Person]
marginality: Recommended
parent: CreativeWork
property: publisher
type: ''
type_url: ''
- bsc_description: A documentation for the container, typically showing install steps,
usage, and a changelog.
cardinality: MANY
controlled_vocab: ''
description: Software application help.
example: '{ "@type": ["SoftwareApplication", "Tool"], "softwareHelp": "https://biotools.readthedocs.io/en/latest/"
}'
expected_types: [CreativeWork]
marginality: Optional
parent: ContainerImage
property: softwareHelp
type: ''
type_url: ''
- bsc_description: ''
cardinality: MANY
controlled_vocab: ''
description: 'Component dependency requirements for application. This includes runtime
libraries that are not included in the application distribution
package, but required to run the application (Examples: DirectX, Java or .NET
runtime). Supersedes requirements.'
example: '{ "@type": ["SoftwareApplication", "Tool"], "softwareRequirements":
"JRE 8.0 or above" }'
expected_types: [Text, URL]
marginality: Optional
parent: ContainerImage
property: softwareRequirements
type: ''
type_url: ''
- bsc_description: version of the container instance
cardinality: ONE
controlled_vocab: ''
description: Version of the software instance.
example: '{ "@type": ["SoftwareApplication", "Tool"], "softwareVersion": "1.0.2"
}'
expected_types: [Text]
marginality: Minimum
parent: ContainerImage
property: softwareVersion
type: ''
type_url: ''
- bsc_description: URL of the container, typically associated with a registry that
shows the ContainerImage, vulnerability scans, and other metadata. This property
can be used on a page listing many containers to indicate each individual container's
page.
cardinality: ONE
controlled_vocab: ''
description: URL of the item.
example: ''
expected_types: [URL]
marginality: Minimum
parent: Thing
property: url
type: ''
type_url: ''
name: ContainerImage
parent_type: SoftwareSourceCode
spec_info: {description: This Container profile specification presents a representation
of a Container such as Docker or Singularity that is used in scientific compute.,
full_example: 'https://www.github.com/openschemas/specifications/tree/master/ContainerImage/examples/',
version: 0.0.1, version_date: 20181021T214745}
spec_type: Profile
status: revision
subtitle: Bioschemas specification describing a Container (e.g., Docker, Singularity)
used in Scientific Compute
use_cases_url: https://www.github.com/openschemas/spec-container
version: 0.0.1