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requirements-dev.txt
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requirements-dev.txt
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#
# This file is autogenerated by pip-compile with Python 3.9
# by the following command:
#
# pip-compile --annotation-style=line --extra=dev --extra=infrastructure --extra=parsing --output-file=requirements-dev.txt --resolver=backtracking dependencies/matid/pyproject.toml dependencies/nomad-dos-fingerprints/pyproject.toml dependencies/parsers/atomistic/pyproject.toml dependencies/parsers/database/pyproject.toml dependencies/parsers/eelsdb/pyproject.toml dependencies/parsers/electronic/pyproject.toml dependencies/parsers/nexus/pyproject.toml dependencies/parsers/workflow/pyproject.toml pyproject.toml requirements.txt
#
aiosmtpd==1.4.4.post2 # via nomad-lab (pyproject.toml)
alabaster==0.7.12 # via -r requirements.txt, sphinx
alembic==1.9.1 # via -r requirements.txt, jupyterhub
amqp==5.1.1 # via -r requirements.txt, kombu
aniso8601==7.0.0 # via -r requirements.txt, nomad-lab (pyproject.toml)
anyio==3.6.2 # via -r requirements.txt, httpcore, starlette, watchfiles
arrow==1.2.3 # via -r requirements.txt, isoduration
asciitree==0.3.3 # via -r requirements.txt, zarr
ase==3.19.0 # via -r requirements.txt, asr, ifes-apt-tc-data-modeling, matid (dependencies/matid/pyproject.toml), quippy-ase
asgiref==3.6.0 # via -r requirements.txt, nomad-lab (pyproject.toml)
asr==0.4.1 # via -r requirements.txt, workflowparsers (dependencies/parsers/workflow/pyproject.toml)
asteval==0.9.31 # via -r requirements.txt, lmfit
astroid==2.11.7 # via atomisticparsers (dependencies/parsers/atomistic/pyproject.toml), nomad-lab (pyproject.toml), pylint
asttokens==2.1.0 # via devtools
astunparse==1.6.3 # via -r requirements.txt, mdtraj
async-generator==1.10 # via -r requirements.txt, jupyterhub
async-timeout==4.0.2 # via -r requirements.txt, redis
atpublic==3.1.1 # via aiosmtpd
attrs==22.2.0 # via -r requirements.txt, aiosmtpd, cattrs, jsonschema, pytest, requests-cache
babel==2.11.0 # via -r requirements.txt, sphinx
backcall==0.2.0 # via -r requirements.txt, ipython
bagit==1.8.1 # via -r requirements.txt, nomad-lab (pyproject.toml)
basicauth==0.4.1 # via -r requirements.txt, nomad-lab (pyproject.toml)
bcrypt==3.2.0 # via -r requirements.txt, nomad-lab (pyproject.toml)
beautifulsoup4==4.11.1 # via -r requirements.txt, bs4
billiard==3.6.4.0 # via -r requirements.txt, celery
biopython==1.80 # via -r requirements.txt, mdanalysis
bitarray==2.3.5 # via -r requirements.txt, nomad-dos-fingerprints (dependencies/nomad-dos-fingerprints/pyproject.toml)
bleach==5.0.1 # via readme-renderer
bs4==0.0.1 # via -r requirements.txt, nomad-lab (pyproject.toml)
build==0.9.0 # via nomad-lab (pyproject.toml), pip-tools
cachetools==4.2.4 # via -r requirements.txt, nomad-lab (pyproject.toml)
cattrs==22.2.0 # via -r requirements.txt, requests-cache
celery[redis]==5.2.7 # via -r requirements.txt, celery
certifi==2022.12.7 # via -r requirements.txt, elasticsearch, httpcore, httpx, requests
certipy==0.1.3 # via -r requirements.txt, jupyterhub
cffi==1.15.1 # via -r requirements.txt, bcrypt, cryptography
cftime==1.6.2 # via -r requirements.txt, netcdf4
charset-normalizer==2.0.12 # via -r requirements.txt, requests
click==8.1.3 # via -r requirements.txt, asr, celery, click-didyoumean, click-plugins, click-repl, flask, mkdocs, mkdocs-click, pip-tools, pynxtools (dependencies/parsers/nexus/pyproject.toml), uvicorn
click-didyoumean==0.3.0 # via -r requirements.txt, celery
click-plugins==1.1.1 # via -r requirements.txt, celery
click-repl==0.2.0 # via -r requirements.txt, celery
cloudpickle==2.2.0 # via -r requirements.txt, dask
colorama==0.4.6 # via twine
comm==0.1.4 # via -r requirements.txt, ipywidgets
commonmark==0.9.1 # via -r requirements.txt, recommonmark
coverage==6.5.0 # via pytest-cov
cryptography==39.0.0 # via -r requirements.txt, nomad-lab (pyproject.toml), pyjwt, pyopenssl, rfc3161ng, secretstorage
cycler==0.11.0 # via -r requirements.txt, matplotlib
dask[array]==2022.2.0 # via -r requirements.txt, dask, hyperspy, kikuchipy, orix, pyxem
debugpy==1.6.5 # via -r requirements.txt, ipykernel
decorator==5.1.1 # via -r requirements.txt, ipyparallel, ipython, validators
devtools==0.8.0 # via nomad-lab (pyproject.toml)
diffpy-structure==3.1.0 # via -r requirements.txt, diffsims, kikuchipy, orix
diffsims==0.5.2 # via -r requirements.txt, kikuchipy, pyxem
dill==0.3.6 # via -r requirements.txt, hyperspy, pylint
dnspython==2.2.1 # via -r requirements.txt, email-validator, pymongo
docker==6.0.1 # via -r requirements.txt, dockerspawner
dockerspawner==12.1.0 # via -r requirements.txt, nomad-lab (pyproject.toml)
docstring-parser==0.12 # via -r requirements.txt, nomad-lab (pyproject.toml)
docutils==0.19 # via -r requirements.txt, m2r, readme-renderer, recommonmark, sphinx
ecdsa==0.18.0 # via -r requirements.txt, python-jose
elasticsearch==7.17.1 # via -r requirements.txt, elasticsearch-dsl, nomad-lab (pyproject.toml)
elasticsearch-dsl==7.4.0 # via -r requirements.txt, nomad-lab (pyproject.toml)
email-validator==1.3.0 # via -r requirements.txt, optimade
emmet-core==0.48.4 # via -r requirements.txt, mp-api
entrypoints==0.4 # via -r requirements.txt, ipyparallel, jupyter-client, jupyterhub, numcodecs
escapism==1.0.1 # via -r requirements.txt, dockerspawner
essential-generators==1.0 # via nomad-lab (pyproject.toml)
et-xmlfile==1.1.0 # via -r requirements.txt, openpyxl
exceptiongroup==1.1.1 # via -r requirements.txt, cattrs
execnet==1.9.0 # via pytest-xdist
executing==0.10.0 # via devtools
f90wrap==0.2.13 # via -r requirements.txt, quippy-ase
fabio==2023.6.0 # via -r requirements.txt, pyfai, silx
fastapi==0.92.0 # via -r requirements.txt, h5grove, nomad-lab (pyproject.toml)
fasteners==0.18 # via -r requirements.txt, mdanalysis, zarr
filelock==3.3.1 # via -r requirements.txt, nomad-lab (pyproject.toml)
flask==2.2.2 # via -r requirements.txt, asr
flatdict==4.0.1 # via -r requirements.txt, pynxtools (dependencies/parsers/nexus/pyproject.toml)
fonttools==4.38.0 # via -r requirements.txt, matplotlib
fqdn==1.5.1 # via -r requirements.txt, jsonschema
fsspec==2022.11.0 # via -r requirements.txt, dask, hyperspy
future==0.18.2 # via -r requirements.txt, uncertainties
ghp-import==2.1.0 # via mkdocs
gitdb==4.0.10 # via -r requirements.txt, gitpython
gitpython==3.1.24 # via -r requirements.txt, pynxtools (dependencies/parsers/nexus/pyproject.toml)
greenlet==2.0.1 # via -r requirements.txt, sqlalchemy
griddataformats==0.7.0 # via -r requirements.txt, mdanalysis
gsd==2.7.0 # via -r requirements.txt, mdanalysis
gunicorn==21.2.0 # via -r requirements.txt, nomad-lab (pyproject.toml)
h11==0.14.0 # via -r requirements.txt, httpcore, uvicorn
h5grove[fastapi]==1.3.0 # via -r requirements.txt, h5grove
h5py==3.6.0 # via -r requirements.txt, electronicparsers (dependencies/parsers/electronic/pyproject.toml), h5grove, hyperspy, ifes-apt-tc-data-modeling, kikuchipy, nionswift, orix, phonopy, pyfai, silx
hjson==3.0.2 # via -r requirements.txt, nomad-lab (pyproject.toml)
html5lib==1.1 # via -r requirements.txt, nomad-lab (pyproject.toml)
httpcore==0.16.3 # via -r requirements.txt, httpx
httptools==0.5.0 # via -r requirements.txt, uvicorn
httpx==0.23.3 # via -r requirements.txt, nomad-lab (pyproject.toml)
hyperspy==1.7.5 # via -r requirements.txt, kikuchipy, pynxtools (dependencies/parsers/nexus/pyproject.toml), pyxem
idna==3.4 # via -r requirements.txt, anyio, email-validator, jsonschema, requests, rfc3986
ifes-apt-tc-data-modeling==0.0.9 # via -r requirements.txt, pynxtools (dependencies/parsers/nexus/pyproject.toml)
imageio==2.24.0 # via -r requirements.txt, hyperspy, kikuchipy, nionswift, nionswift-io, nionui, scikit-image
imagesize==1.4.1 # via -r requirements.txt, sphinx
importlib-metadata==4.13.0 # via -r requirements.txt, flask, hyperspy, keyring, markdown, mkdocs, pynxtools (dependencies/parsers/nexus/pyproject.toml), sphinx, twine
inflection==0.5.1 # via -r requirements.txt, nomad-lab (pyproject.toml)
ipykernel==6.16.2 # via -r requirements.txt, ipyparallel
ipyparallel==8.4.1 # via -r requirements.txt, hyperspy
ipython==7.34.0 # via -r requirements.txt, hyperspy, ipykernel, ipyparallel, ipywidgets
ipywidgets==8.1.1 # via -r requirements.txt, pyxem
isodate==0.6.1 # via -r requirements.txt, rdflib
isoduration==20.11.0 # via -r requirements.txt, jsonschema
isort==4.3.21 # via pylint
itsdangerous==2.1.2 # via -r requirements.txt, flask, nomad-lab (pyproject.toml)
jaraco-classes==3.2.3 # via keyring
jedi==0.18.2 # via -r requirements.txt, ipython
jeepney==0.8.0 # via keyring, secretstorage
jinja2==3.0.3 # via -r requirements.txt, flask, hyperspy, jupyterhub, mkdocs, mkdocs-macros-plugin, mkdocs-material, sphinx
jmespath==0.10.0 # via -r requirements.txt, nomad-lab (pyproject.toml)
joblib==1.1.0 # via -r requirements.txt, mdanalysis, nomad-lab (pyproject.toml), scikit-learn
jsonpointer==2.3 # via -r requirements.txt, jsonschema
jsonschema[format]==4.17.3 # via -r requirements.txt, jsonschema, jupyter-telemetry, oauthenticator
jupyter-client==7.4.8 # via -r requirements.txt, ipykernel, ipyparallel
jupyter-core==4.12.0 # via -r requirements.txt, jupyter-client
jupyter-telemetry==0.1.0 # via -r requirements.txt, jupyterhub
jupyterhub==1.4.2 # via -r requirements.txt, dockerspawner, nomad-lab (pyproject.toml), oauthenticator
jupyterlab-widgets==3.0.9 # via -r requirements.txt, ipywidgets
keyring==23.11.0 # via twine
kikuchipy==0.8.7 # via -r requirements.txt, pynxtools (dependencies/parsers/nexus/pyproject.toml)
kiwisolver==1.4.4 # via -r requirements.txt, matplotlib
kombu==5.2.4 # via -r requirements.txt, celery
lark==1.1.5 # via -r requirements.txt, optimade, pynxtools (dependencies/parsers/nexus/pyproject.toml)
latexcodec==2.0.1 # via -r requirements.txt, pybtex
lazy-object-proxy==1.9.0 # via astroid
llvmlite==0.39.1 # via -r requirements.txt, numba
lmfit==1.2.2 # via -r requirements.txt, pyxem
locket==1.0.0 # via -r requirements.txt, partd
lxml==4.7.1 # via -r requirements.txt, atomisticparsers (dependencies/parsers/atomistic/pyproject.toml)
m2r==0.2.1 # via -r requirements.txt, nomad-lab (pyproject.toml)
mako==1.2.4 # via -r requirements.txt, alembic
markdown==3.4.1 # via mkdocs, mkdocs-click, mkdocs-material, pymdown-extensions
markupsafe==2.1.1 # via -r requirements.txt, jinja2, mako, nomad-lab (pyproject.toml), werkzeug
matplotlib==3.5.3 # via -r requirements.txt, ase, asr, diffsims, hyperspy, kikuchipy, matplotlib-scalebar, mdanalysis, orix, phonopy, pyfai, pymatgen, pyxem, radioactivedecay
matplotlib-inline==0.1.6 # via -r requirements.txt, ipykernel, ipython
matplotlib-scalebar==0.8.1 # via -r requirements.txt, orix
mccabe==0.6.1 # via pylint
mdanalysis==2.5.0 # via -r requirements.txt, atomisticparsers (dependencies/parsers/atomistic/pyproject.toml)
mdtraj==1.9.6 # via -r requirements.txt, nomad-lab (pyproject.toml)
memoization==0.4.0 # via -r requirements.txt, nomad-lab (pyproject.toml)
mergedeep==1.3.4 # via -r requirements.txt, mkdocs, pynxtools (dependencies/parsers/nexus/pyproject.toml)
mistune==2.0.4 # via -r requirements.txt, m2r
mkdocs==1.2.3 # via mkdocs-macros-plugin, mkdocs-material, mkdocs-redirects, nomad-lab (pyproject.toml)
mkdocs-click==0.8.0 # via nomad-lab (pyproject.toml)
mkdocs-macros-plugin==0.6.3 # via nomad-lab (pyproject.toml)
mkdocs-material==8.1.1 # via nomad-lab (pyproject.toml)
mkdocs-material-extensions==1.0.3 # via mkdocs-material, nomad-lab (pyproject.toml)
mkdocs-redirects==1.2.0 # via nomad-lab (pyproject.toml)
mmtf-python==1.1.3 # via -r requirements.txt, mdanalysis
mongoengine==0.25.0 # via -r requirements.txt, nomad-lab (pyproject.toml)
mongomock==4.1.2 # via -r requirements.txt, optimade
monty==2022.9.9 # via -r requirements.txt, emmet-core, mp-api, pymatgen
more-itertools==9.0.0 # via jaraco-classes, pytest
mp-api==0.30.10 # via -r requirements.txt, pymatgen
mpmath==1.2.1 # via -r requirements.txt, sympy
mrcfile==1.4.3 # via -r requirements.txt, griddataformats
msgpack==1.0.4 # via -r requirements.txt, mmtf-python, mp-api, nomad-lab (pyproject.toml)
mypy==1.0.1 # via atomisticparsers (dependencies/parsers/atomistic/pyproject.toml), nomad-lab (pyproject.toml)
mypy-extensions==0.4.3 # via mypy
names==0.3.0 # via nomad-lab (pyproject.toml)
natsort==8.2.0 # via -r requirements.txt, hyperspy
nest-asyncio==1.5.6 # via -r requirements.txt, ipykernel, jupyter-client
netcdf4==1.5.4 # via -r requirements.txt, electronicparsers (dependencies/parsers/electronic/pyproject.toml)
networkx==2.6.3 # via -r requirements.txt, matid (dependencies/matid/pyproject.toml), mdanalysis, pymatgen, radioactivedecay, scikit-image
niondata==0.15.5 # via -r requirements.txt, nionswift, nionswift-io
nionswift==0.16.8 # via -r requirements.txt, pynxtools (dependencies/parsers/nexus/pyproject.toml)
nionswift-io==0.15.1 # via -r requirements.txt, nionswift
nionui==0.6.11 # via -r requirements.txt, nionswift
nionutils==0.4.8 # via -r requirements.txt, niondata, nionswift, nionswift-io, nionui
nptyping==1.4.4 # via -r requirements.txt, nomad-lab (pyproject.toml)
numba==0.56.4 # via -r requirements.txt, diffsims, hyperspy, kikuchipy, orix, pyxem, sparse
numcodecs==0.10.2 # via -r requirements.txt, zarr
numexpr==2.8.4 # via -r requirements.txt, hyperspy, pyfai
numpy==1.22.4 # via -r requirements.txt, ase, biopython, cftime, dask, diffsims, f90wrap, fabio, griddataformats, gsd, h5grove, h5py, hyperspy, ifes-apt-tc-data-modeling, imageio, kikuchipy, lmfit, matid (dependencies/matid/pyproject.toml), matplotlib, mdanalysis, mdtraj, mrcfile, netcdf4, niondata, nionswift, nionswift-io, nionui, nptyping, numba, numcodecs, numexpr, numpy-quaternion, orix, pandas, phonopy, pyfai, pymatgen, pywavelets, pyxem, quippy-ase, radioactivedecay, scikit-image, scikit-learn, scipy, silx, sparse, spglib, tifffile, xarray, zarr
numpy-quaternion==2022.4.3 # via -r requirements.txt, orix
oauthenticator==15.1.0 # via -r requirements.txt, nomad-lab (pyproject.toml)
oauthlib==3.2.2 # via -r requirements.txt, jupyterhub
openpyxl==3.1.2 # via -r requirements.txt, nomad-lab (pyproject.toml)
optimade[mongo]==0.22.1 # via -r requirements.txt, optimade
orix==0.11.1 # via -r requirements.txt, diffsims, kikuchipy, pyxem
orjson==3.9.4 # via -r requirements.txt, h5grove, nomad-lab (pyproject.toml)
packaging==23.0 # via -r requirements.txt, build, dask, docker, gunicorn, hyperspy, ipykernel, matplotlib, mdanalysis, mkdocs, mongomock, pint, pooch, pytest, scikit-image, sphinx
palettable==3.3.0 # via -r requirements.txt, pymatgen
pamela==1.0.0 # via -r requirements.txt, jupyterhub
pandas==1.3.5 # via -r requirements.txt, eelsdbconverter (dependencies/parsers/eelsdb/pyproject.toml), ifes-apt-tc-data-modeling, panedr, pymatgen, xarray
panedr==0.2 # via -r requirements.txt, atomisticparsers (dependencies/parsers/atomistic/pyproject.toml)
parmed==3.0.0 # via -r requirements.txt, nomad-lab (pyproject.toml)
parso==0.8.3 # via -r requirements.txt, jedi
partd==1.3.0 # via -r requirements.txt, dask
passlib==1.7.4 # via -r requirements.txt, nomad-lab (pyproject.toml)
pep517==0.13.0 # via build
pexpect==4.8.0 # via -r requirements.txt, ipython
phonopy==2.11.0 # via -r requirements.txt, asr, workflowparsers (dependencies/parsers/workflow/pyproject.toml)
pickleshare==0.7.5 # via -r requirements.txt, ipython
pillow==9.4.0 # via -r requirements.txt, imageio, matplotlib, nionswift, scikit-image
pint==0.17 # via -r requirements.txt, hyperspy, nomad-lab (pyproject.toml)
pip-tools==6.13.0 # via nomad-lab (pyproject.toml), pynxtools (dependencies/parsers/nexus/pyproject.toml)
pkginfo==1.8.3 # via twine
platformdirs==3.1.1 # via -r requirements.txt, pooch, pylint, requests-cache
plotly==5.11.0 # via -r requirements.txt, asr, pymatgen
pluggy==0.13.1 # via pytest
pooch==1.7.0 # via -r requirements.txt, kikuchipy, orix
prettytable==3.6.0 # via -r requirements.txt, hyperspy
prometheus-client==0.15.0 # via -r requirements.txt, jupyterhub
prompt-toolkit==3.0.36 # via -r requirements.txt, click-repl, ipython
psutil==5.9.4 # via -r requirements.txt, diffsims, ipykernel, ipyparallel, pyxem
ptyprocess==0.7.0 # via -r requirements.txt, pexpect
py==1.11.0 # via pytest, pytest-forked
pyasn1==0.4.8 # via -r requirements.txt, pyasn1-modules, python-jose, rfc3161ng, rsa
pyasn1-modules==0.2.8 # via -r requirements.txt, rfc3161ng
pybtex==0.24.0 # via -r requirements.txt, emmet-core, pymatgen
pycifrw==4.4.5 # via -r requirements.txt, diffpy-structure
pycodestyle==2.8.0 # via atomisticparsers (dependencies/parsers/atomistic/pyproject.toml), nomad-lab (pyproject.toml)
pycparser==2.21 # via -r requirements.txt, cffi
pydantic==1.10.9 # via -r requirements.txt, emmet-core, fastapi, nomad-lab (pyproject.toml), optimade
pyfai==2023.9.0 # via -r requirements.txt, pyxem
pygments==2.14.0 # via -r requirements.txt, ipython, mkdocs-material, readme-renderer, sphinx
pyjwt[crypto]==2.6.0 # via -r requirements.txt, pyjwt
pylint==2.13.9 # via atomisticparsers (dependencies/parsers/atomistic/pyproject.toml), nomad-lab (pyproject.toml), pylint-mongoengine, pylint-plugin-utils
pylint-mongoengine==0.4.0 # via nomad-lab (pyproject.toml)
pylint-plugin-utils==0.7 # via atomisticparsers (dependencies/parsers/atomistic/pyproject.toml), nomad-lab (pyproject.toml), pylint-mongoengine
pymatgen==2023.2.28 # via -r requirements.txt, asr, emmet-core, mp-api, nomad-lab (pyproject.toml)
pymdown-extensions==9.7 # via mkdocs-material
pymongo==4.3.3 # via -r requirements.txt, mongoengine, nomad-lab (pyproject.toml), optimade
pyopenssl==23.0.0 # via -r requirements.txt, certipy
pyparsing==3.0.9 # via -r requirements.txt, matplotlib, mdtraj, rdflib
pyrsistent==0.19.3 # via -r requirements.txt, jsonschema
pytest==5.4.3 # via atomisticparsers (dependencies/parsers/atomistic/pyproject.toml), nomad-lab (pyproject.toml), pytest-cov, pytest-forked, pytest-timeout, pytest-xdist
pytest-cov==2.7.1 # via atomisticparsers (dependencies/parsers/atomistic/pyproject.toml), nomad-lab (pyproject.toml)
pytest-forked==1.6.0 # via pytest-xdist
pytest-timeout==1.4.2 # via atomisticparsers (dependencies/parsers/atomistic/pyproject.toml), nomad-lab (pyproject.toml)
pytest-xdist==1.34.0 # via nomad-lab (pyproject.toml)
python-dateutil==2.8.2 # via -r requirements.txt, arrow, elasticsearch-dsl, ghp-import, hyperspy, ipyparallel, jupyter-client, jupyterhub, matplotlib, mkdocs-macros-plugin, pandas, rfc3161ng
python-dotenv==0.21.0 # via -r requirements.txt, uvicorn
python-gitlab==2.10.1 # via nomad-lab (pyproject.toml)
python-jose==3.3.0 # via -r requirements.txt, python-keycloak
python-json-logger==2.0.2 # via -r requirements.txt, jupyter-telemetry, nomad-lab (pyproject.toml)
python-keycloak==0.26.1 # via -r requirements.txt, nomad-lab (pyproject.toml)
python-logstash==0.4.6 # via -r requirements.txt, nomad-lab (pyproject.toml)
python-magic==0.4.24 # via -r requirements.txt, nomad-lab (pyproject.toml)
python-multipart==0.0.5 # via -r requirements.txt, nomad-lab (pyproject.toml)
pytz==2022.7.1 # via -r requirements.txt, babel, celery, nionswift, pandas, pynxtools (dependencies/parsers/nexus/pyproject.toml)
pytz-deprecation-shim==0.1.0.post0 # via -r requirements.txt, tzlocal
pywavelets==1.3.0 # via -r requirements.txt, scikit-image
pyxem==0.15.1 # via -r requirements.txt, pynxtools (dependencies/parsers/nexus/pyproject.toml)
pyyaml==6.0 # via -r requirements.txt, dask, electronicparsers (dependencies/parsers/electronic/pyproject.toml), hyperspy, kikuchipy, mkdocs, mkdocs-macros-plugin, phonopy, pybtex, pyyaml-env-tag, uvicorn
pyyaml-env-tag==0.1 # via mkdocs
pyzeo==0.1.4 # via -r requirements.txt, nomad-lab (pyproject.toml)
pyzmq==25.0.0 # via -r requirements.txt, ipykernel, ipyparallel, jupyter-client
quippy-ase==0.9.14 # via -r requirements.txt, nomad-lab (pyproject.toml)
radioactivedecay==0.4.17 # via -r requirements.txt, ifes-apt-tc-data-modeling
rdflib==5.0.0 # via -r requirements.txt, nomad-lab (pyproject.toml)
readme-renderer==37.3 # via twine
recommonmark==0.7.1 # via -r requirements.txt, nomad-lab (pyproject.toml)
redis==4.4.2 # via -r requirements.txt, celery
requests==2.28.2 # via -r requirements.txt, docker, eelsdbconverter (dependencies/parsers/eelsdb/pyproject.toml), hyperspy, jupyterhub, mp-api, oauthenticator, optimade, pooch, pymatgen, python-gitlab, python-keycloak, requests-cache, requests-toolbelt, rfc3161ng, sphinx, twine
requests-cache==1.0.1 # via -r requirements.txt, pynxtools (dependencies/parsers/nexus/pyproject.toml)
requests-toolbelt==0.10.1 # via python-gitlab, twine
rfc3161ng==2.1.3 # via -r requirements.txt, nomad-lab (pyproject.toml)
rfc3339-validator==0.1.4 # via -r requirements.txt, jsonschema
rfc3986[idna2008]==1.5.0 # via -r requirements.txt, httpx, rfc3986, twine
rfc3987==1.3.8 # via -r requirements.txt, jsonschema
rope==0.21.0 # via nomad-lab (pyproject.toml)
rsa==4.9 # via -r requirements.txt, python-jose
ruamel-yaml==0.17.21 # via -r requirements.txt, jupyter-telemetry, oauthenticator, pymatgen
ruamel-yaml-clib==0.2.7 # via -r requirements.txt, ruamel-yaml
ruff==0.1.8 # via nomad-lab (pyproject.toml)
runstats==2.0.0 # via -r requirements.txt, nomad-lab (pyproject.toml)
scikit-image==0.19.3 # via -r requirements.txt, hyperspy, kikuchipy, pyxem
scikit-learn==1.0.2 # via -r requirements.txt, kikuchipy, matid (dependencies/matid/pyproject.toml), pyxem
scipy==1.7.1 # via -r requirements.txt, ase, diffsims, griddataformats, hyperspy, kikuchipy, lmfit, matid (dependencies/matid/pyproject.toml), mdanalysis, mdtraj, niondata, nionswift, orix, pyfai, pymatgen, pyxem, radioactivedecay, scikit-image, scikit-learn, sparse
secretstorage==3.3.3 # via keyring
sentinels==1.0.0 # via -r requirements.txt, mongomock
silx==1.1.2 # via -r requirements.txt, pyfai
six==1.16.0 # via -r requirements.txt, asttokens, astunparse, basicauth, bcrypt, bleach, click-repl, diffpy-structure, ecdsa, elasticsearch-dsl, griddataformats, html5lib, isodate, latexcodec, pybtex, pytest-xdist, python-dateutil, python-multipart, rdflib, rfc3339-validator, url-normalize, validators
smmap==5.0.0 # via -r requirements.txt, gitdb
sniffio==1.3.0 # via -r requirements.txt, anyio, httpcore, httpx
snowballstemmer==2.2.0 # via -r requirements.txt, sphinx
soupsieve==2.3.2.post1 # via -r requirements.txt, beautifulsoup4
sparse==0.13.0 # via -r requirements.txt, hyperspy
spglib==2.0.2 # via -r requirements.txt, asr, emmet-core, matid (dependencies/matid/pyproject.toml), phonopy, pymatgen
sphinx==5.3.0 # via -r requirements.txt, recommonmark
sphinxcontrib-applehelp==1.0.2 # via -r requirements.txt, sphinx
sphinxcontrib-devhelp==1.0.2 # via -r requirements.txt, sphinx
sphinxcontrib-htmlhelp==2.0.0 # via -r requirements.txt, sphinx
sphinxcontrib-jsmath==1.0.1 # via -r requirements.txt, sphinx
sphinxcontrib-qthelp==1.0.3 # via -r requirements.txt, sphinx
sphinxcontrib-serializinghtml==1.1.5 # via -r requirements.txt, sphinx
sqlalchemy==1.4.46 # via -r requirements.txt, alembic, jupyterhub
starlette==0.25.0 # via -r requirements.txt, fastapi
structlog==22.3.0 # via -r requirements.txt, pynxtools (dependencies/parsers/nexus/pyproject.toml)
sympy==1.10.1 # via -r requirements.txt, hyperspy, pymatgen, radioactivedecay
tabulate==0.8.9 # via -r requirements.txt, nomad-lab (pyproject.toml), pymatgen
tenacity==8.1.0 # via -r requirements.txt, plotly
termcolor==2.1.0 # via mkdocs-macros-plugin
threadpoolctl==3.1.0 # via -r requirements.txt, mdanalysis, scikit-learn
tifffile==2021.11.2 # via -r requirements.txt, h5grove, hyperspy, scikit-image
tomli==2.0.1 # via build, mypy, pep517, pylint
toolz==0.12.0 # via -r requirements.txt, dask, hyperspy, partd
toposort==1.9 # via -r requirements.txt, nomad-lab (pyproject.toml)
tornado==6.2 # via -r requirements.txt, ipykernel, ipyparallel, jupyter-client, jupyterhub
tqdm==4.64.1 # via -r requirements.txt, diffsims, hyperspy, ipyparallel, kikuchipy, mdanalysis, orix, pymatgen, twine
traitlets==5.8.1 # via -r requirements.txt, comm, ipykernel, ipyparallel, ipython, ipywidgets, jupyter-client, jupyter-core, jupyter-telemetry, jupyterhub, matplotlib-inline
traits==6.4.1 # via -r requirements.txt, hyperspy
transforms3d==0.4.1 # via -r requirements.txt, diffsims, pyxem
twine==3.4.2 # via nomad-lab (pyproject.toml)
typed-ast==1.4.2 # via nomad-lab (pyproject.toml)
types-pytz==2022.7.0.0 # via pynxtools (dependencies/parsers/nexus/pyproject.toml)
types-pyyaml==6.0.12.1 # via pynxtools (dependencies/parsers/nexus/pyproject.toml)
types-requests==2.28.11.16 # via pynxtools (dependencies/parsers/nexus/pyproject.toml)
types-urllib3==1.26.25.8 # via types-requests
typing-extensions==4.4.0 # via -r requirements.txt, astroid, atomisticparsers (dependencies/parsers/atomistic/pyproject.toml), emmet-core, gitpython, mp-api, mypy, numcodecs, pydantic, pylint, starlette
typish==1.9.3 # via -r requirements.txt, nptyping
tzdata==2023.3 # via -r requirements.txt, pytz-deprecation-shim
tzlocal==4.3 # via -r requirements.txt, nionswift, pynxtools (dependencies/parsers/nexus/pyproject.toml)
uncertainties==3.1.7 # via -r requirements.txt, lmfit, pymatgen
unidecode==1.3.2 # via -r requirements.txt, nomad-lab (pyproject.toml)
uri-template==1.2.0 # via -r requirements.txt, jsonschema
url-normalize==1.4.3 # via -r requirements.txt, requests-cache
urllib3==1.26.14 # via -r requirements.txt, docker, elasticsearch, requests, requests-cache
uvicorn[standard]==0.20.0 # via -r requirements.txt, h5grove, uvicorn
uvloop==0.17.0 # via -r requirements.txt, uvicorn
validators==0.18.2 # via -r requirements.txt, nomad-lab (pyproject.toml)
vine==5.0.0 # via -r requirements.txt, amqp, celery, kombu
watchdog==2.1.9 # via mkdocs
watchfiles==0.18.1 # via -r requirements.txt, uvicorn
wcwidth==0.2.5 # via -r requirements.txt, prettytable, prompt-toolkit, pytest
webcolors==1.12 # via -r requirements.txt, jsonschema
webencodings==0.5.1 # via -r requirements.txt, bleach, html5lib
websocket-client==1.4.2 # via -r requirements.txt, docker
websockets==10.4 # via -r requirements.txt, uvicorn
werkzeug==2.2.2 # via -r requirements.txt, flask
wheel==0.38.4 # via -r requirements.txt, astunparse, pip-tools
widgetsnbextension==4.0.9 # via -r requirements.txt, ipywidgets
wrapt==1.12.1 # via -r requirements.txt, astroid, nomad-lab (pyproject.toml)
xarray==0.20.2 # via -r requirements.txt, pynxtools (dependencies/parsers/nexus/pyproject.toml)
zarr==2.12.0 # via -r requirements.txt, hyperspy
zipfile37==0.1.3 # via -r requirements.txt, pynxtools (dependencies/parsers/nexus/pyproject.toml)
zipp==3.11.0 # via -r requirements.txt, importlib-metadata
zipstream-new==1.1.5 # via -r requirements.txt, nomad-lab (pyproject.toml)
# The following packages are considered to be unsafe in a requirements file:
# pip
# setuptools