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uganda.fasta
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uganda.fasta
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>AY444185.1:37-961 HIV-1 isolate A-264.615 from Uganda pol protein (pol) gene, partial cds
GTAAGAATAGGGGGACAGCTAAAAGAAGCTCTATTAGATACAGGAGCAGATGATACAGTATTAGAAGATATAAATTTGCC
AGGAAAATGGAAACCAAGAATGATAGGGGGAATTGGAGGTTTTATCAAAGTAAAACAGTATGATCAGATACTTATAGAAA
TTTGTGGAAAAAAGGCTATAGGTACAGTATTAGTAGGACCTACACCTGTCAACATAATTGGAAGAAATATGTTGACTCAG
ATTGGTTGTACTTTAAATTTTCCAATTAGTCCTATTGAGACTGTACCAGTAACATTAAAGCCAGGAATGGATGGCCCAAG
GATTAARCAATGGCCATTGACAGAAGAAAAAATAAAAGCATTAACAGAAATTTGTAGAGAGATGGAAAAGGAAGGAAAAA
TTTCAAAAATTGGGCCTGAAAATCCATACAATACTCCAGTATTTGCTATAAAGAAAAAAGATAGCACTAAATGGAGAAAA
TTAGTAGATTTTAGAGAACTCAATAAAAGAACTCAGGACTTCTGGGAAGTTCAATTAGGAATACCGCATCCCGCAGGTTT
AAAAAAGAAAAAATCAGTAACAGTACTAGATGTGGGGGACGCATACTTTTCAGTCCCTTTAGATGAAAACTTTAGAAAGT
ATACTGCATTCACCATACCTAGTATAAACAATGAGACACCAGGAATCAGGTATCAGTACAATGTGCTTCCACAGGGATGG
AAAGGATCACCGGCAATATTCCAGAGTAGCATGACAAAAATCTTAGAGCCCTTTAGATTACAAAATCCAGAAATAATTAT
CTATCAATACATGGATGACTTGTATGTAGGATCTGATTTAGAAATAGGGCAGCATAGAACAAAAGTAGAGGAGTTAAGAG
CTCATCTATTGAGTTGGGGATTTACTACACCAGACAAAAAGCATC
>EF612140.1:37-961 HIV-1 isolate 771-140407R from Uganda polyprotein (pol) gene, partial cds
GTAAGAATAGGAGGACAGCTAAAAGAAGCTCTATTAGATACAGGAGCAGATGATACAGTRTTAGAAGATATAAATTTGCC
AGGAAAATGGAAACCAAAAATGATAGGGGGAATTGGAGGTTTTATCAAGGTAAAACAGTATGATCAGATACCTATAGAAA
TTTGTGGAAAAAAGGCTATAGGTACAGTATTAGTAGGACCTACACCTGTCAACATAATTGGAAGAAATATGTTGACTCAG
ATTGGTTGTACTTTAAATTTTCCAATTAGTCCTATTGAGACTGTACCAGTAACATTAAAGCCAGGAATGGATGGCCCAAG
GATTAAACAATGGCCATTGACAGAAGAAAAAATAAAAGCATTAACAGAAATTTGTAAAGAGATGGAAAAGGAAGGAAAAA
TTTCAAAAATWGGGCCTGAAAATCCATACAATACTCCAGTATTTGCTATAAAGAAAAAGGATAGCACTAAATGGAGAAAA
TTAGTAGATTTTAGAGAGCTMAATAAAAGAACTCAGGACTTCTGGGAAGTTCAATTAGGAATACCGCATCCCGCAGGTTT
AAAAAAGAAAAAATCAGTAACAGTACTAGATGTGGGGGACGCATATTTTTCAGTTCCTTTAGATRAAAGCTTTAGAAAGT
ATACTGCATTCACCATACCTAGTATAAACAATGARACACCAGGAATCAGGTATCAGTACAATGTGCTTCCACAGGGATGG
AAAGGGTCACCAGCAATATTCCAGAGTAGCATGACAAAAATCTTAGAGCCYTTTAGATCAMAGAATCCAGAARTAATTAT
CTATCAATATATGGATGACTTGTATGTAGGATCTGATTTAGAAATAGGGCAGCATAGAACAAAAGTAGAGGAGTTGAGAG
CTCATCTATTGAGTTGGGGATTTACTACACCAGACAAAAAGCATC
>AF447846.1:38-961 HIV-1 strain UG275 from Uganda pol protein (pol) gene, partial cds
TAAAAATAGGAGGACAGCTAAAAGAAGCTCTATTAGATACAGGAGCAGATGATACAGTATTAGAAGATATAAATTTGCCA
GGAAAATGGAAACCAAAAATGATAGGGGGAATTGGAGGTTTTATCAAAGTAAGACAGTATGATCAGATACTTATAGAAAT
TTGTGGAAAAAAGGCTATAGGTACAGTATTAGTAGGACCTACACCTGTCAACATAATTGGAAGAAATATGTTGACTCAGA
TTGGATGTACTTTAAATTTTCCAATTAGTCCTATTGAGACTGTACCAGTAACATTAAAGCCAGGAATGGATGGCCCAAGG
ATTAAACAATGGCCATTGACAGAAGAAAAAATAAAAGCATTAACAGAAATTTGTAGAGAGATGGAAAAGGAAGGAAAAAT
TTCAAAAATTGGGCCTGAAAATCCATACAATACTCCAGTATTTGCTATAAAGAAAAAAGATAGCACTAAATGGAGAAAAT
TAGTAGATTTTAGAGAGCTCAATAAAAGAACTCAGGACTTCTGGGAAGTTCAATTAGGAATACCGCATCCCGCAGGTTTA
AAAAAGAAAAAATCAGTAACAGTACTAGATGTGGGGGACGCATATTTTTCAGTCCCTTTAGATGAAAACTTTAGAAAGTA
TACTGCATTCACCATACCTAGTATAAACAATGAGACACCAGGAATCAGGTATCAGTACAATGTGCTTCCACAGGGATGGA
AAGGATCACCAGCAATATTCCAGAGTAGCATGATAAAAATCTTAGAGCCCTTTAGATCAAAAAATCCAGAAATAATTATC
TATCAATATATGGATGACTTGTATGTAGGATCTGATTTAGAAATAGGGCAGCATAGAACAAAAGTAGAGGAGTTAAGAGC
TCATCTATTGAGTTGGGGATTTACTACACCAGACAAAAARCATC
>EF612049.1:37-961 HIV-1 isolate 508-128740N from Uganda polyprotein (pol) gene, partial cds
GTAAGAGTAGGAGGACAGCTAAAAGAAGCTCTATTAGATACAGGAGCAGATGATACAGTATTAGAAGATATAAATTTACC
AGGAAAATGGAAACCAAAAATGATAGGGGGAATTGGAGGTTTTATCAAGGTAAAACAGTATGATCAGATACTTATAGAAA
TTTGTGGAAAAAAGGCTATAGGTACAGTACTAGTAGGACCTACACCTGTCAACATAATTGGAAGGAATATGTTGACTCAG
ATTGGTTGTACTTTAAATTTTCCAATTAGTCCTATTRAGACTGTACCAGTAGCATTAAAGCCAGGAATGGATGGCCCAAG
GATTAAACAATGGCCATTGACAGAAGAAAAAATAAAAGCATTAACAGAAATTTGTAAAGAAATGGAAAAGGAAGGAAAAA
TTTCAAAAATTGGGCCTGAAAATCCATACAAYACTCCAATATTTGCGATAAAGAAAAAAGATAGCACTAAATGGAGAAAA
TTAGTAGATTTTAGAGAGCTCAATAAAAGAACTCAGGATTTTTGGGAAGTTCAACTAGGAATACCGCATCCCGCAGGTCT
AAAAAAGAAAAAATCAGTAACAGTACTAGATGTGGGGGACGCATATTTTTCAGTTCCTTTAGATAAAAACTTTAGAAAGT
ATACTGCATTCACCATACCTAGTATAAACAATGAGACACCAGGAATCAGGTATCAGTACAATGTGCTTCCACAAGGATGG
AAAGGATCACCAGCAATATTCCAGAGTAGCATGACAAGAATCTTAGAGCCCTTTAGATCACAAAATCCAGAAATAATTAT
CTATCAATACATGGATGACTTGTATGTAGGATCTGATTTAGAAATAGGGCAGCATAGAGCAAAAGTAGAGGAGTTGAGAG
CTCATCTATTGAGTTGGGGATTTACTACACCAGACAAAAAGCATC
>JN652196.1:37-961 HIV-1 isolate H0534-1 from Uganda pol protein (pol) gene, partial cds
GTAAAAATAGGAGGACAGCTAAAAGAAGCTCTATTAGATACAGGAGCRGATGATACAGTATTAGAAGATATAAATTTGYC
AGGAAAATGGAAACCAAAAATGATAGGGGGAATTGGAGGTTTTATCAAAGTAAAACAGTATGATCAGATACTTATAGAAA
TTTGTGGAAAAAAGGCTATAGGTACAGTATTAGTAGGACCCACACCTGTCAACATAATTGGAAGGAATATGTTGACTCAG
ATTGGTTGTACTTTAAATTTTCCAATTAGTCCTATTGAGACTGTACCAGTAACATTAAAGCCAGGAATGGATGGCCCAAA
GATTAAACAATGGCCATTGACAGAAGAAAAAATAAAAGCATTAACAGAAATTTGTACAGAGATGGAAAAGGAAGGAAAAA
TTTCAAAAATTGGGCCTGAAAATCCATACAATACTCCAATATTTGCTATAAAGAAAAAGGACAGCACTAAGTGGAGAAAA
TTAGTAGATTTCAGAGAGCTCAATAAAAGAACTCAAGACTTTTGGGAAGTTCAATTAGGGATACCGCATCCAGCGGGTTT
ACAAAAGAAAAAATCAGTAACAGTACTAGATGTGGGGGATGCATATTTTTCAGTTCCCTTAGATGAAAACTTTAGAAAGT
ATACTGCATTCACCATACCTAGTATAAACAATGCGACACCAGGAATCAGGTATCAGTACAATGTGCTTCCACAGGGATGG
AAAGGATCAYCAGCAATATTCCAGAGTAGCATGACAAAAATCTTAGAGCCCTTTAGATTACAAAATCCAGGAATAATTAT
CATTCAATATGTGGATGACTTGTATGTAGGATCTGATTTAGAAATAGGGCAGCATAGAACAAAAGTAGAGGAGCTGAGAG
CTCATCTATTGAAGTGGGGATTTACTACACCAGATAAAAAGCATC