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nigeria.fasta
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nigeria.fasta
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>MH654973.1:1-1597 HIV-1 isolate 20256v01 from Nigeria pol protein (pol) gene, partial cds
ACGACCCCTTGTCACAGTAAGGATAGGGGGACAGCTAATAGAAGCTCTATTAGACACAGGAGCAGATGATACAGTATTAG
AACAGATAGATTTACCAGGGAAATGGAAACCAAAAATGATAGGAGGAATTGGAGGATTTATCAAAGTAAAACAGTATGAT
CAAATACCCATAGAAATTGAGGGAAAAAAGGCYATRGGGACAGTACTGGTAGGACCTACACCTATCAACATAATTGGGAG
AAATATGTTGACTCAGATTGGTTGTACTCTAAATTTTCCAATTAGCCCTATTGARACTGTCCCAGTAAAATTAAAACCAG
GAATGGATGGCCCAAAAGTTAAACAATGGCCATTAACTGAAGAAAAGATAAAAGCATTAACAGAAATTTGTACAGAKATG
GAAAAGGAAGGAAAAATTTCAAGAATTGGGCCTGAAAATCCATACAACACWCCAATATTTGCCATAAAGAAAAAAGACAG
TACTAAATGGAGAAAGTTGGTAGATTTCAGAGAGCTCAATAAAAGGACTCAAGACTTCTGGGAGGTCCAATTAGGCATAC
CTCAYCCAGCGGGGTTAAAAAAGAAAAAATCAGTAACAGTGCTAGATGTGGGAGATGCATATTTTTCAGTTCCCTTAGAT
GAAAGCTTTAGAAAGTATACAGCATTCACTATACCTAGTATAAACAATGAGACCCCAGGGATTAGATATCAGTACAATGT
GCTACCACAGGGATGGAAAGGATCACCAGCAATATTTCAGAGTAGCATGACAAAAATCTTAGAACCCTTTAGAAAAAATA
ATCCAGAAATAGTGATCTACCAGTACATGGATGATTTATATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAGCAAAA
GTAGAAGAGTTAAGAAATCATCTACTGAAATGGGGATTTACCACACCAGACAAAAAACATCAGAAAGAACCTCCATTTCT
TTGGATGGGATATGAGCTCCATCCTGACAAGTGGACTGTGCAACCTATACAGCTGCCAAACAARGAAAGCTGGACTGTCA
ATGATATACAAAAAYTAGTGGGAAAACTCAATTGGGCAAGTCAGATTTATCCAGGGATTCAAGTAAGGCAACTATGTAAA
CTCCTTAGGGGGGCCAAAGCACTAACAGACATAGTRACACTAACTGAAGAAGCAGAATTAGAATTGGCAGAGAACAGGGA
AATTCTAAAAGAACCTGTACATGGAGTCTACTATGACCCATCAAAAGACTTAGTAGCAGAAGTACAGAAACAAGGGCTCG
AGCAATGGACATATCAAATTTATCAAGAGCCATACAAAAATCTAAAAACAGGAAAGTATGCAAAAAGGGGGTCTGCCCAC
ACTAATGATGTAAAACAATTAACAGAAGYARTACAAAAAATAGCTACAGAGAGCATAGTAATATGGGGAAAAGTTCCTAG
ATTTAGACTACCTATAAAAAARGAAACATGGGACGTATGGTGGACAGAATATTGGCAGGCCACCTGGATTCCTGATTGGG
AGTTTGTCAATACCCCCCCTCTAGTAAAGTTATGGTATCAACTAGAAACAGAACCCATACGAGGAGCAGATACTTAC
>KX389646.1:1479-3075 HIV-1 isolate 12NG060248 from Nigeria gag protein (gag) gene, complete cds; pol protein (pol) gene, partial cds; and vif protein (vif), vpr protein (vpr), tat protein (tat), rev protein (rev), vpu protein (vpu), envelope glycoprotein (env), and nef protein (nef) genes, complete cds
ACGACCCCTAGTCACAGTAAGAATAGGGGGACAGCTAATAGAGGCTCTATTAGACACAGGAGCAGATGATACAGTATTAG
AACAAATAGATTTACCAGGAAAATGGAAACCAAAAATGATAGGGGGAATTGGGGGATTTATCAAAGTAAAACAGTATGAT
CAAATACTTATAGAAATTGAAGGGAAAAAGGCTATAGGGACAGTACTAGTAGGACCTACACCTATCAACATAATTGGGAG
AAATATGTTGACTCAGATTGGTTGTACTTTAAATTTTCCAATTAGTCCTATTGAGACTGTACCAGTAAAATTAAAGCCAG
GAATGGATGGCCCAAAGGTTAAACAATGGCCATTGACAGAAGAAAAAATAAAAGCATTAACAGAAATTTGTGCAGATATG
GAAAAGGAAGGAAAAATTTCAAAAATTGGGCCTGAAAATCCATACAACACTCCAATATTTGCTATAAAGAAAAAGGACAG
TACAAAATGGAGGAAGTTGGTAGATTTCAGAGAACTTAATAAAAGAACTCAAGACTTCTGGGAGGTCCAATTAGGCATAC
CTCATCCTGCTGGGTTAAAAAAGAAGAAATCAGTAACAGTACTAGATGTGGGAGATGCATATTTTTCAATTCCCCTAGAT
AAAAGCTTTAGAAAATATACAGCATTCACTATACCTAGTACAAATAATGAGACACCAGGGATCAGATATCAGTATAATGT
GCTTCCACAGGGATGGAAAGGATCACCAGCAATATTCCAGAGTAGCATGACAAAAATCTTAGAACCCTTTAGAACAAAAA
ATCCAGAAATAGTGATTTACCAGTACATGGATGATTTATATGTAGGATCTGACTTAGAAATAGAGCAGCATAGAGCAAAA
GTAGAAGAGCTAAGAGATCATCTACTAAAGTGGGGATTAACCACACCAGATAAGAAACATCAGAAAGAACCTCCATTTCT
TTGGATGGGATATGAGCTCCATCCTGACAAATGGATGGTGCAACCTATACAGCTGCCAGACAAAGAAAACTGGACTGTCA
ATGATATACAAAAATTAGTGGGAAAACTAAACTGGGCAAGTCAGATTTATCCAGGGATTAAAGTAAAGCAACTATGTAAA
CTCCTTAGGGGAGCCAAAGCACTAACAGACATAGTGCCACTGACTGAAGAAGCAGAATTAGAATTGGCAGAGAACAGGGA
AATTCTAAAAGAACCTGTACATGGGGTCTACTATGACCCATCAAAAGACTTAATAGCAGAAGTACAAAAACAAGGGCTCG
ACCAATGGACATATCAAATTTATCAAGAGCCTTACAAAAATCTGAAAACAGGAAAGTATGCAAAAAGGGGGTCTGCCCAC
ACTAATGATGTAAAACAATTAACAGAAGCAGTGCAAAAAATAGCCACAGAGAGCATAATAATATGGGGAAAAGTTCCTAA
ATTTAAACTACCTATAAAAAAGGAAACATGGGAAGTATGGTGGACAGAATATTGGCAGGCCACCTGGATTCCTGATTGGG
AGTTTGTCAACACCCCTCCTCTAGTAAAGTTATGGTATCAGTTAGAAACAGAACCCATACTAGGAGCAGAAACTTAC
>FM210705.1:186-1762 HIV-1 M:C_04SN.MS281 partial pol gene, isolate 04SN.MS281
ACGACCCCTAGTCACAGTAAGAATAGGGGGACAGCTAATAGAAGCTCTATTAGACACAGGAGCAGATGATACAGTATTAG
AACAAATAGATTTACCAGGAAAATGGAAACCAAAAATGATAGGGGGAATTGGAGGGTTTATCAAAGTAAAACAGTATGAT
CAAATACTTATGGAAATTGAAGGAAAAAAGGCTATAGGGACAGTACTAGTAGGGCCTACACCTATCAACATAATTGGAAG
AAATATGTTGACTCAGATTGGTTGTACTTTAAATTTTCCAATTAGTCCTATTGAGACTGTACCAGTAAAATTAAAGCCAG
GAATGGATGGTCCAAAGGTTAAACAATGGCCATTAACAGAAGAAAAAATAAAAGCATTAACAGAAATTTGTACAGATATG
GAAAAGGAAGGAAAAATTTCAAAAATTGGGCCTGAAAATCCATACAACACTCCAATATTTGCCATAAAGAAAAAAGACAG
TACTAAATGGAGAAAGTTGGTAGATTTCAGAGAACTCAATAAAAGAACTCAAGACTTCTGGGAGGTCCAATTAGGCATAC
CCCACCCCGCGGGGTTAAAGAAGAAAAGATCAGTAACAGTACTGGATGTGGGAGATGCATATTTTTCAGTGCCCTTAGAT
GAAAGCTTTAGAAAGTATACAGCATTCACTATACCTAGTGTAAATAATGAGACACCAGGAATTAGATATCAGTACAATGT
GCTTCCACAGGGATGGAAAGGATCACCAGCAATATTTCAGTGTAGCATGACAAAAATCTTAGAACCCTTTAGAACAAAAA
ATCCAGAAATGGTGATCTACCAGTACATGGATGATTTATATGTAGGATCTGACTTAGAAATAGGGCAACATAGAGCAAAA
ATAGAAGAGTTAAGAGAACATCTGCTGAGATGGGGATTTACCACACCAGATAAAAAACATCAGAAAGAACCCCCATTTCT
GTGGATGGGATATGAGCTCCATCCTGACAAATGGACGGTACAACCTATACAGCTGCCAGACAAAGAAAGCTGGACTGTCA
ATGATATACAAAAACTAGTGGGAAAACTAAATTGGGCAAGTCAGATTTATCCAGGGGTTCAAGTAAAGCAACTGTGTAAA
CTCCTTAGGGGGGCCAAAGCACTAACAGACATAGTACCACTGACTAAAGAAGCAGAATTAGAACTGGCAGAGAACAGGGA
AATTCTAAGAGAACCTGTACATGGAGTCTACTATGACCCATCAAAAGAATTAATAGCAGAAGTACAGAAACAAGGGCTCG
ACCAATGGACATATCAAATTTATCAAGAGCCATACAAAAATCTAAAAACAGGAAAGTATGCAAAAAGGGGGTCTGTCCAC
ACTAATGATGTAAAACAATTAACAGAGGCAGTGCAAAAAATAGCCACAGAGAGCATAGTAATATGGGGAAAAGTTCCTAA
ATTTAAACTACCTATAAGGAAAGAAACATGGGAAGTATGGTGGACAGACTATTGGCAGGCCACCTGGATTCCTGATTGGG
AGTTTGTCAATACCCCTCCTCTAGTAAAGTTATGGTATCGATTAGAAACAGACCCCA
>KX389625.1:1479-3075 HIV-1 isolate 09NG010315 from Nigeria gag protein (gag) gene, complete cds; pol protein (pol) gene, partial cds; and vif protein (vif), vpr protein (vpr), tat protein (tat), rev protein (rev), vpu protein (vpu), envelope glycoprotein (env), and nef protein (nef) genes, complete cds
ACGACCCCTAGTCACAGTAARAATAGGGGGACAGCTAATAGAAGCTCTATTAGACACAGGAGCAGATGATACAGTATTAG
AACAAATAGATTTACCAGGAAAATGGAAACCAAGAATGATAGGGGGAATTGGAGGATTTATCAAAGTAAAACAGTATGAT
CAAATACTTATAGAAATTGAAGGAAAAAAGGCYATAGGGACAGTATTAGTAGGACCTACACCTATCAACATAATTGGGAG
AAATATGTTGACTCAGATTGGTTGTACTTTAAATTTTCCAATTAGTCCTATTGAGACTGTACCAGTAAAATTAAAGCCAG
GAATGGATGGCCCAAAGGTTAAACAATGGCCATTGACAGAAGAAAAAATAAAAGCATTAACAGAAATTTGTACAGAAATG
GAAAAGGAAGGGAAAATTTCAAAAATTGGGCCTGAAAATCCATACAACACTCCAATATTTGCAATAAAGAAAAAGGACAG
TACTAAATGGAGAAAATTGGTAGATTTCAGAGAGCTCAATAAAAGAACTCAAGACTTCTGGGAAGTCCAGTTAGGCATAC
CTCATCCCGCGGGGTTAAAAAAGAAAAAATCAGTAACAGTACTAGATGTGGGAGATGCTTATTTTTCAGTTCCCTTAGAT
GAAAGTTTTAGAAAGTATACAGCATTCACCATACCTAGTATAAATAATGAGACACCAGGGATTAGATATCAGTACAATGT
GCTTCCACAGGGATGGAAAGGATCACCAGCAATATTTCAGAGTAGCATGACAAAAATCTTAGAACCCTTCAGAATAAAAA
ATCCAGAAATGGTRATATACCAGTACATGGATGATTTATATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAGCAAAA
ATAGAGGAGTTAAGAAATCATCTACTGAAATGGGGATTTACCACACCAGATAAGAAACATCAGAAAGAACCTCCATTCCT
TTGGATGGGATATGAGCTCCATCCTGACAAATGGACAGTACAACCTATAAAGCTGCCAGACAAGGAAAGCTGGACTGTCA
ATGATATACAGAAACTAGTAGGAAAATTAAATTGGGCAAGTCAGATTTATGCAGGGATTAAAGTAAAGCAGCTATGTAAA
CTCCTTAGGGGGGCCAAAGCACTAACAGACATAGTACCACTGACTGAAGAAGCAGAATTAGAATTGGCAGAGAACAGGGA
AATTCTAAAAGAACCTGTACATGGAGTTTACTATGACCCATCAAAAGACTTAATAGCAGAAATACAGAAACAAGGGCCYG
ACCAATGGACATATCAAATTTATCAAGAGCCATACAAAAATCTAAAAACAGGAAAATATGCAAAAAGGGGGTCTGCCCAC
ACTAATGATGTAAAACAATTAACAGAAGCAGTGCAAAAAGTAGCCAGAGARRGCATAGTAATATGGGGAAAAGTTCCTAA
ATTTAAACTACCTATAAGGAAAGACACATGGGAAGTATGGTGGACAGAATATTGGCAGGCCACCTGGATTCCTGAGTGGG
AGTTTGTCAACACCCCTCCTTTAGTAAAGTTATGGTATCAATTAGAACCAGAACCCATACCAGGAGCAGACACTTAC
>KX389626.1:1440-3036 HIV-1 isolate 09NG010261 from Nigeria gag protein (gag) gene, complete cds; pol protein (pol) gene, partial cds; and vif protein (vif), vpr protein (vpr), tat protein (tat), rev protein (rev), vpu protein (vpu), envelope glycoprotein (env), and nef protein (nef) genes, complete cds
ACGACCCCTAGTCACAGTAAGAATAGGGGGACAGCTAATAGAAGCTCTATTAGACACAGGAGCAGATGATACAGTATTAG
AACAAATAGATTTACCAGGAAAATGGAAACCAAAAATGATAGGGGGAATTGGAGGATTTATCAAAGTAAAACAGTATGAT
CAAATACCTATGGAAATTGAAGGAAAAAAGGCTATAGGGACAGTACTAGTCGGGCCTACACCTATCAACATAATTGGGAG
AAATATGTTGACTCAGATTGGTTGTACTTTAAATTTTCCAATTAGTCCTATTGAGACAGTACCAGTAAAATTAAAGCCAG
GAATGGATGGTCCAAGAGTTAAACAATGGCCATTGACAGAAGAGAAAATAAAAGCATTAACAGAAATTTGTACAGATATG
GAAAAGGAAGGAAAAATTTCAAAAATTGGGCCTGAAAATCCATACAACACTCCAATATTTGCCATAAAGAAAAAAGACAG
TACTAAATGGAGAAAGTTGGTAGATTTCAGGGAACTCAATAAAAGAACTCAAGATTTCTGGGAGGTCCAATTAGGCATAC
CTCATCCCGCGGGGTTAAAAAAGAAAAAATCAGTAACAGTATTGGATGTGGGAGATGCATATTTTTCAATTCCCTTAGAT
CAAAGCTTTAGAAAGTATACAGCATTTACTATACCTAGTGTAAATAATGAGACACCAGGGATTAGATATCAGTACAATGT
GCTTCCACAGGGATGGAAAGGATCACCAGCAATATTTCAGAGTACCATGACAAAAATCTTAGAACCCTTCAGAATAAAAA
ATCCAGAAATAGTGATCTACCAGTACATGGATGATTTATATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAGCAAAA
ATAGAAGAGTTAAGAGAACATCTACTAAGATGGGGACTTACTACACCAGATAAAAAACATCAGAAAGAGCCTCCATTTCT
TTGGATGGGATATGAGCTCCATCCTGACAAATGGACAGTACAACCTATACAGCTGCCAGAAAAGGACAGCTGGACTGTTA
ATGATATACAAAAATTAGTGGGAAAACTAAATTGGGCAAGTCAAATTTATTCAGGGATTAAGGTAAGGCAACTATGTAAA
CTCCTTAGGGGGGCCRAAGCATTAACAGACATAGTACCATTGACTACAGAAGCAGAGTTAGAATTGGCAGAGAACAGGGA
GATTCTAAAAGAACCTGTACATGGAGTCTACTATGACCCATCAAAAGATTTAATAGCAGAAATACAGAAACAAGGGTCCG
ACCAATGGACATATCAAATTTATCAAGAGCCATACAAAAATCTAAAAACAGGAAAGTATGCAAAAAGGGGGTCTGCCCAC
ACTAATGATGTAAGGCAATTAACAGAAGCAGTGCAAAAAGTAGCCACAGAAAGCATAGTAATATGGGGAAAAGTTCCTAA
ATTTAGATTACCTATAAGGAAAGAAACATGGGAAGTATGGTGGACAGAATATTGGCAGGCCACCTGGATTCCTGATTGGG
AGTTTGTCAATACCCCCCCTCTAGTAAAGTTATGGTATCGATTAGAAACAGAACCCATACTAGGAGCAGAAACTTAC
>JN248582.1:1477-3073 HIV-1 isolate 08NG.SC13 from Nigeria nonfunctional gag protein (gag) gene, partial sequence; pol protein (pol) gene, partial cds; and vif protein (vif), vpr protein (vpr), tat protein (tat), rev protein (rev), vpu protein (vpu), envelope glycoprotein (env), and nef protein (nef) genes, complete cds
ACGACCCCTAGTCACAGTAAGAATAGGGGGACAGCTAATAGAAGCTCTATTAGACACAGGAGCAGATGATACAGTATTAG
AACAAATAGATTTACCAGGAAAATGGAAACCAAAAATGATAGGGGGAATTGGAGGATTTATCAAAGTAAAACAGTATGAT
CAAATACTTATAGAAATTGAAGGAAAAAAGGCTATAGGGACAGTACTAGTAGGGCCTACACCTATCAACATAATTGGAAG
AAATATGTTGACTCAGATTGGTTGTACTTTAAATTTTCCAATCAGTCCTATTGAGACTGTACCAGTAAAATTAAAGCCAG
GAATGGATGGCCCAAAGGTTAAACAATGGCCATTGACAGAAGAAAAAATAAAAGCATTAACAGAAATTTGTGCAGATATG
GAAAAGGAAGGAAAAATTTCAAAAATTGGGCCTGAAAATCCATACAACACTCCAGTATTTGCCATAAAGAAAAAAGACAG
TACTAAATGGAGAAAGTTAGTAGATTTCAGAGAGCTCAATAAAAGAACTCAAGACTTCTGGGAAGTCCAATTAGGCATAC
CTCATCCCGCGGGGTTAAAAAAGAAAAAATCAGTAACAGTACTAGATGTGGGAGATGCATATTTTTCAGTTCCTTTAGAT
AAAGACTTTAGAAAGTATACAGCATTCACTATACCTAGTATAAATAATGAGACACCAGGGATTAGATATCAGTACAATGT
GCTTCCACAGGGATGGAAAGGGTCACCAGCAATATTTCAGAGTAGCATGACAAAAATCTTAGAACCCTTTAGAATGAAGA
ATCCAGAAATAGTGATCTACCAATACATGGATGATTTATATGTAGGATCTGACTTGGAAATAGGGAAGCATAGAGAAAAA
ATAGAGGAGTTAAAAGAACATCTACTAAAATGGGGATTTACTACACCAGATAAAAAGCATCAAAAAGAACCTCCATTTCT
CTGGATGGGATATGAGCTCCATCCTGACAAATGGACAGTACAACCTATACAGCTGCCAGACAAGGAAAGCTGGACAGTCA
ATGATATACAAAAATTAGTGGGAAAATTAAATTGGGCAAGTCAAATTTATGCAGGGATTAAAGTAAAACAACTATGTAAA
CTCCTTAGGGGAGCCAAAGCCCTAACAGACATAGTACCACTGACTGAAGAAGCAGAATTAGAATTAGCAGAAAACAGGGA
GATTCTAAGAGAACCTGTACATGGAGTCTACTATGACCCATCAAAAGACTTAATAGCAGAAGTACAGAAACAAGGGCTTG
ACCAATGGACATATCAAATTTATCAAGAGCCATACAAAAATCTGAAAACAGGAAAGTATGCAAAAAGGGGGTCAGCCCAC
ACTAATGATGTAAAACAATTAACAGAAGCAGTGCAAAAAATAGCCACAGAAGGCATAGTGATATGGGGAAAAGTTCCTAA
ATTCAAACTACCTATAAGGAAAGAAACATGGGAAGTATGGTGGACAGAATATTGGCAGGCCACCTGGATTCCTGATTGGG
AGTTTGTCAATACCCCTCCTCTAGTAAAGTTATGGTATCAATTAGAAACAGAACCCATACTAGGAGCAGAAACTTAC
>MH654893.1:1-1597 HIV-1 isolate 20311v01 from Nigeria pol protein (pol) gene, partial cds
ACGACCCTTAGTCACAGTAAAAATAGAGGGGCAGTTAATAGAAGCTCTATTAGACACAGGAGCAGATGATACAGTATTAG
AAGACATAGATTTACCAGGAAAATGGAAACCAAAAATGATAGGGGGAATTGGAGGTTTTATCAAAGTAAGACAATATGAT
CAAATACTTATAGAAATTTGTGGAAAAAGGGCCATAGGCACAGTATTAGTAGGACCCACACCTGTCAACATAATTGGACG
AAATATGTTGACTCAGATTGGTTGTACTTTAAATTTTCCAATTAGTCCTATTGAAACTGTACCAGTAAAATTAAAGCCAG
GAATGGATGGCCCAAGGGTCAAACAATGGCCATTGACAGAAGAGAAGATAAAAGCATTAACAGAAATTTGTACAGATATG
GAAAAGGAAGGGAAAATTTCAAGAATTGGGCCTGAAAATCCATACAATACTCCAATATTTGCCATAAAGAAAAAGGATAG
TAATAAATGGAGAAAATTAGTAGATTTCAGAGAACTCAATAAGAGAACTCAAGATTTCTGGGAGGTCCAATTAGGCATAC
CTCATCCCGCGGGTTTAAAAAAGAAAAAATCAGTAACAGTACTAGATGTAGGAGATGCATATTTTTCAGTTCCCTTAGAT
GAAGACTTTAGAAAGTATACAGCATTCACTATACCTAGTATAAATAATGAGACCCCAGGAATTAGATATCAGTACAATGT
GCTACCACAGGGATGGAAAGGATCACCAGCAATATTTCAGAGTAGCATGACAAAAATCTTAGATCCCTTTAGAACAAAGA
ATCCAGAAATAGTGATCTACCAGTACATGGATGATTTATATATAGGATCTGACTTAGAAATAGGGCAGCATAGAGCAAAA
GTAGAGGAGCTAAGAAATCATCTATTGAAATGGGGACTTACCACACCAGACAAAAAGCATCAGAAAGAACCTCCATTTCT
TTGGATGGGTTATGAACTCCATCCTGACAAATGGACAGTCCAGCCTATACAGCTACCAAACAAGGACAGCTGGACTGTCA
ATGATATACAGAAATTAGTGGGAAAACTAAATTGGGCAAGTCAGATCTATTCAGGGATTAAAGTAAAGCAACTATGTAAA
CTCCTTAGGGGGGCCAAAGCACTAACAGACATAGTACCACTAACTGAAGAAGCAGAATTAGAATTGGCAGAGAACAGGGA
AATTCTAAAGGAACCTGTACATGGGGTCTACTATGACCCATCAAAAGACTTAATAGCAGAAGTGCAGAAACAAGGGCCCG
ACCAATGGACATATCAAATTTATCAAGAGCAATACAAAAATCTAAAAACAGGAAAGTATGCAAAAAGGGGGTCTGCCCAC
ACTAATGACGTGAAACAATTAACAGAGGTAGTACAAAAAATAGCTACAGAGGGCATAGTGATATGGGGAAAAGTTCCTAA
ATTTAGACTACCTATAAAGAAAGAAACATGGGAGGTATGGTGGACAGAATATTGGCAGGCCACCTGGATTCCTGATTGGG
AGTTTGTCAATACCCCTCCTCTAGTAAAGTTATGGTATCAGCTAGAAACAGAACCCATACCAGGAGCAGAAACTTAC
>MH654892.1:1-1597 HIV-1 isolate 20078v01 from Nigeria pol protein (pol) gene, partial cds
ACGACCCCTAGTCACAGTAAGAATAGGGGGAAAACTAATAGAAGCCCTATTAGACACAGGAGCAGATGATACAGTATTAG
AACAAATAGATTTACCAGGAAAATGGAAACCAAAAATGATAGGGGGAATTGGAGGATTTATCAAAGTAAAACAGTATGAT
CAAATACCTATAGAAATTGAGGGAAAAAAGGCTATAGGGACAGTATTAGTAGGACCTACACCTATCAACATAATTGGAAG
AAATATATTGACYCAGATTGGTTGTACTTTAAATTTTCCAATTAGTCCTATTGAAACTGTACCAGTAAAATTAAAGCCAG
GAATGGATGGCCCAAAGATTAAACAATGGCCATTGACAGAAGAAAAAATAAAAGCATTAACAGAAATTTGTACAGAAATG
GAAAAGGAAGGAAAAATTTCAAAAATTGGGCCTGAAAATCCATACAACACTCCAATATTTGCCATAAAGAAAAAAGACAG
TACTAAATGGAGAAAATTGGTAGATTTCAGAGAGCTCAATAAAAGAACTCAAGACTTCTGGGAGGTCCAATTAGGTATAC
CTCACCCTGCAGGGTTAAGAAAGAATAGATCAGTAACAGTACTAGATGTGGGAGACGCATATTTTTCAGTTCCCTTATAT
GAAGACTTTAGAAAGTATACTGCATTCACCATACCCAGTATAAACAATGAGACACCAGGGATTAGATATCAATACAATGT
GCTCCCACAGGGATGGAAAGGGTCACCAGCAATATTTCAGAGTTCTATGATAAAAATCTTAGAGCCCTTTAGAACAAAAA
ATCCAGAGCTAGTGATCTACCAATACATGGATGATTTATATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAGCAAAA
ATAGAGGAGTTAAGAGAACATCTACTGAGATGGGGATTTACCACACCAGATAAAAAACATCAGAAAGAACCTCCATTCCT
TTGGATGGGATATGAGCTCCATCCTGACAAATGGACGGTACAACCTATACAGCTGCAAGAAAAGGAAAGCTGGACTGTCA
ATGATATACAAAAATTAGTGGGAAAACTAAATTGGGCAAGTCAGATTTATCCAGGGATTAAAGTAAAGCAACTATGTAAA
CTTCTTCGGGGGGCCAAAGCACTAACAGACATAGTACCACTGACTGAGGAAGCAGAATTGGAATTAGCAGAGAACAGGGA
AATTCTAAGAGAACCTGTACATGGAGTCTACTATGACCCATCAAAAGATTTAATAGCAGAAGTGCAGAAACAAGGGCCTG
ACCAATGGACATATCAAATTTATCAAGAGCCATACAAAAATCTGAAAACAGGAAAGTATGCAAAAAAGGGGTCTGCCCAC
ACTAATGATGTAAAACAATTAACAGAAGCAGTGCAAAAAATAGCTACAGAGAGCATAGTAATATGGGGAAAAGTTCCTAG
ATTTAAACTACCTATAAGGAAAGAAACATGGGAAGTATGGTGGACAGAATATTGGCAAGCCACCTGGATTCCTGATTGGG
AGTTTGTCAATACCCCTCCTCTAGTAAAGTTATGGTATAGGTTAGAAACAGAACCCATAGCAGGAGCAGAAACTTAC
>KY953202.1:1590-3186 HIV-1 isolate DEMG11NG008 from Nigeria, partial genome
ACGACCCCTAGTCACAGTAAAAATAGGGGGACAGCTGATAGAAGCCCTATTAGACACAGGAGCAGATGATACAGTATTAG
AACAAATAGATTTACCAGGAAGATGGAAACCAAAAATGATAGGGGGAATTGGAGGATTTATCAAAGTAAAACAGTATGAT
CAAATACTTATAGAAATTGAGGGAAGAAAGGCTATAGGGACAGTATTAGTAGGACCTACACCTATCAACATAATAGGAAG
AAATATGTTGACCCAAATTGGTTGTACTTTAAATTTTCCAATTAGTCCCATTGAAACTGTACCAGTAAAATTAAAGCCAG
GAATGGATGGCCCAAAGGTTAAACAATGGCCATTGACAGAAGAAAAAATAAAAGCATTAACAGAAATTTGTACAGAAATG
GAAAAGGAAGGAAAAATTTCAAAAATTGGGCCTGAAAATCCATACAACACTCCAGTATTTGCTATAAAGAAAAAAGACAG
TACTAAATGGAGAAAATTGGTAGATTTCAGAGAGCTCAATAAAAAAACTCAAGACTTCTGGGAGGTCCAATTAGGTATAC
CTCATCCAGCAGGGTTAAAAAAGAAAAAATCAGTAACAGTACTAGATGTGGGAGATGCATATTTTTCAGTTCCCTTAGAT
GAAAGCTTTAGAAAGTACACTGCATTCACTATACCCAGTGTAAACAATGAGACACCAGGGATTAGATATCAATACAATGT
GCTTCCACAGGGATGGAAAGGATCACCAGCAATATTTCAGAGTAGCATGATAAAAATCTTAGAGCCCTTTAGAGCAAAAA
ATCCAGACATAGTAATCTACCAATATATGGATGACTTATATGTAGGATCTGACTTAGAAATAGAGCAGCATAGAGCAAAA
GTAGAAGAGTTAAGAGAACATCTATTGAGATGGGGATTTACCACACCAGATAAAAAACATCAGAAAGAACCTCCATTTCT
TTGGATGGGATATGAGCTCCATCCGGACAAATGGACGATACAACCTATAAAGCTACCAGACAAAGAGAGTTGGACTGTCA
ATGACATACAAAAATTAGTGGGGAAGCTAAATTGGGCAAGTCAGATTTATTCAGGGATTAAAGTAAAGCAGCTATGTAAA
CTTCTTAGGGGGGCCAAAGCACTAACAGACATAGTACCACTGACTAAAGAAGCAGAATTAGAGTTGGCAGAGAACAGGGA
AATTCTAAAAGAACCTGTTCATGGAGTCTACTATGACCCAACAAAAGACTTAATAGCAGAAGTACAGAAACAAGGGCTTG
ACCAATGGACATATCAAATTTATCAAGAGCAATACAAAAATCTGAAAACAGGAAAGTATGCAAAAAGGGGATCTGCCCAC
ACTAATGATGTAAAACAATTAACAGAAGTAGTGCAAAAAATAGCCACAGAGGGTATAGTAATATGGGGAAAAGTTCCTAA
ATTTAAACTACCTATAAGGAAGGAAACATGGGAAGTATGGTGGACAGAATATTGGCAGGCCACCTGGATTCCTGATTGGG
AGTTTGTCAATACCCCTCCTTTAGTAAAGTTATGGTATCAGTTAGAAACAGAACCCATACCAGGGGCAGAAACTTAC
>KX389645.1:1500-3096 HIV-1 isolate 11NG050489 from Nigeria gag protein (gag) gene, complete cds; pol protein (pol) gene, partial cds; and vif protein (vif), vpr protein (vpr), tat protein (tat), rev protein (rev), vpu protein (vpu), envelope glycoprotein (env), and nef protein (nef) genes, complete cds
ACGACCCTTAGCCACAGTAAGAATAGGGGGACAGCTAATAGAAGCCCTATTAGACACAGGAGCAGATGRTACAGTATTAG
AACAAATAGATTTACCAGGAAAATGGAAACCAAAAATGATAGGGGGAATTGGAGGATTTATCAAAGTAAAACAGTATGAT
CAAATACCTATGGAAATTGAGGGGAAAAAGGCTATAGGGACAGTATTAGTAGGACCTACACCTATCAACATAATTGGAAG
AAATATGTTGGCTCAGATAGGTTGTACTTTAAATTTTCCAATTAGTCCTATTGAAACTGTACCAGTAAAATTAAAACCAG
GAATGGATGGCCCAAAGGTTAAACAATGGCCATTGACAGAAGAAAAAATAAAAGCATTAACAGAAATCTGTACAGAAATG
GAAAAAGAAGGGAAAATTTCAAAAATTGGGCCTGAAAATCCATACAACACTCCAATATTTGCCATAAAGAAAAAAGACAG
TACTAAATGGAGAAAATTAGTAGATTTCAGAGAGCTCAATAAAAGAACTCAAGACTTTTGGGAGGTCCAATTAGGTATAC
CTCATCCCGCAGGGTTAAAAAAGAAAAAATCAGTAACAGTACTAGATGTAGGAGATGCATATTTTTCAGTTCCCTTAGAT
AAAAGTTTCAGGAAGTATACTGCATTCACTATACCCAGTATAAACAATGAGACACCAGGGATCAGATATCAATACAATGT
ACTTCCACAGGGATGGAAAGGATCACCAGCAATATTTCAGAGTAGCATGACAAAAATTTTAGAGCCCTTTAGAACAAAAA
ATCCAGAAATAGTAATCTACCAATACATGGATGATTTATATGTAGGCTCTGATTTAGAAATAGGGCAGCATAGAGCAAAA
ATAGAGGAGTTAAGAGATCATTTATTGAAATGGGGATTTACCACACCAGATAAAAAACATCAGAAAGAACCTCCATTCCT
TTGGATGGGATATGAGCTCCATCCTGACAAATGGACGGTGCAACCTATACAGCTGCCAGACAAGGAAGACTGGACTGTTA
ATGATATACAAAAATTAGTGGGAAAACTAAATTGGGCAAGTCAGATTTATGCAGGGATTAAAGTAAAGCAACTCTGTAAA
CTTCTTAGGGGGGCCAAGGCACTAACAGACATAGTAACACTGACTGAAGAAGCAGAACTGGAATTGGCAGAGAACAGGGA
GATTCTAAAAGAACCTGTACATGGAGTCTACTATGACCCCTCAAAAGACTTAATAGCAGAAATACAGAAACAAGGGCCCG
ACCAATGGACATATCAAATTTATCAAGAGCCATACAAAAATCTGAAAACAGGAAAGTATGCAAGAAGGGGGGCTGCCCAC
ACCAATGATGTAAAACAATTAACAGAAGCAGTGCAAAAAATAGCCACAGAGGGCATAGTAATATGGGGAAAAGTTCCTAA
ATTTAAACTACCTATAAGGAAAGAGACATGGGAAGTATGGTGGACAGAATACTGGCAAGCTACCTGGATTCCTGATTGGG
AATTTGTCAATACCCCTCCTCTGGTAAAGTTATGGTATCAATTAGAAACAGAACCCATACTAGGAGCAGAAACTTAC
>MH654901.1:1-1597 HIV-1 isolate 20286v01 from Nigeria pol protein (pol) gene, partial cds
ACGACCCCTAGTCACAGTAAGAATAGGGGGACAACTAATAGAAGCCCTATTAGACACAGGAGCAGATGATACAGTATTAG
AACAAATAAATTTACCAGGAAAATGGAAACCAAAAATGATAGGGGGAATTGGAGGATTTATCAAAGTAAAACAGTATGAT
CAAGTACCTATAGAAATTGAGGGAAAAAAGGCAATAGGGACAGTATTAGTAGGACCTACACCTATCAACATAATTGGAAG
AAATATGTTGACTCAGATTGGTTGTACTTTAAATTTTCCAATTAGCCCTGTTRAAACTGTACCAGTAGAGTTAAAGCCAG
GAATGGATGGCCCAAAGGTTAAACAATGGCCATTGACAGAAGAAAAAATAAAAGCATTAACAGAAATTTGTACAGAAATG
GAAAAGGAAGGAAAAATTTCAAAAATTGGGCCTGAAAATCCATACAACACTCCWATATTTGCCATAAAGAAAAAAGACAG
TACTAAATGGAGAAAATTGGTAGATTTCAGRGAGCTCAATAAAAGAACTCAAGACTTCTGGGAGGTCCARTTAGGTATAC
CYCAYCCAGCAGGRTTAAAAAAGAAAAAATCAGTAACAGTACTAGATGTGGGAGAYGCATATTTTTCAGKTCCCTTATAT
GAAGGTTTTAGAAAGTATACTGCATTCACCATACCCAGTATAAACAATGAGACACCAGGGATTAGRTAYCAATACAATGT
GCTTCCACAGGGATGGAAAGGATCACCAGCAATMTTTCAGAGTACCATGACAAAAATCTTAGAGCCCTTTAGAACAGAAA
ATCCAGAAATAGTGATCTACCAATACATGGATGATTTATATRTAGGATCTGACTTAGAAATAGGGCAGCATAGGGCAAAA
GTAGAGGAGTTAAGRAACCATCTATTGAGATGGGGATTTACCACACCAGATAAAAAACATCAGAAAGAACCTCCMTTCCT
TTGGATGGGATATGAGCTCCATCCTGACAAATGGACGGTACAACCTATACAGYTGCCAGAAAAGGAAAGCTGGACTGTCA
ATGATATACAAAAATTAGTGGGAAAACTAAATTGGGCRAGTCAGATTTATCCAGGGATTAAAGTAAAGCAACTATGTAAA
CTTCTTCGGGGAGCCAAAGCACTAACAGACATAGTACCACTGACTGAAGAAGCAGAATTRGAATTAGCAGAGAACAGGGA
GATTCTAAAAGAACCTGTACATGGAGTCTACTATGACCCATCAAAAGACTTAATAGCRGAAGTACAGAAACAAGGGAAYG
ACCAATGGACATATCAAATTTATCAAGAGCCATACAAAAATCTGAAAACAGGAAAATATGCAAAAARGGGGTCTGCCCAC
ACTAATGATGTAAAGCAATTAACAGAAGCAGTGCAAAAAATAGCCACAGAGGGCATAGTAATATGGGGAAAAGTTCCTAA
ATTTAAACTACCTATAAGRAAAGAAACATGGGAYATATGGTGGACAGAATATTGGCAAGCCACCTGGATTCCTGAYTGGG
AGTTTGTCAATACACCTCCCCTAGTAAAGTTATGGTACMGGTTAGAAACAGAACCCATAGCAGGAGCAGAAACTTAC
>MH654899.1:1-1597 HIV-1 isolate 20384v01 from Nigeria pol protein (pol) gene, partial cds
ACGACCCCTTGTCACAGTRAAAATAGGGGGACAGTTAATAGAAGCTCTATTGGACACAGGAGCAGATGATACAGTATTAG
AACAAATAGATTTACCAGGAAAATGGAAACCAAAAATGATAGGGGGAATTGGAGGGTTTATCAAAGTAAAACAATATGAT
CAAATACATATGGAAATTGAAGGGAAAAAGGCTATAGGGACAGTACTAGTAGGACCTACACCTATCAACATAATTGGGAG
AAATATGTTGACTCAGATTGGTTGTACTTTAAATTTTCCAATTAGTCCTATTGAGACTGTACCAGTAAAGTTAAAGCCAG
GAATGGATGGCCCAAGGGTTAAACAATGGCCACTGACAGAAGARAAAATAAAAGCATTAACAGAAATTTGTAAAGAAATG
GAAAAGGAAGGAAAAATTTCAAAAATTGGGCCTGACAATCCATACAACACTCCAATATTTGCCATAAAGAAAAAAGACAG
TACAAAATGGAGAAAGTTGGTAGATTTTAGAGAGCTCAATAAAAGAACTCAAGATTTCTGGGAAGTCCAATTAGGCATAC
CTCATCCCGCGGGGTTAAAAAAGAAAAGATCAGTAACAGTACTAGATGTGGGGGATGCATACTTTTCAGTTCCCTTAGAT
GAGGGCTTTAGAAAGTATACAGCATTCACTATACCTAGTGTAAATAATGAGACACCAGGAGTTAGATACCAATACAATGT
ACTTCCACAGGGATGGAAAGGATCACCAGCAATATTTCAGAGTAGCATGACAAAAATTTTAGAACCCTTTAGAGCAAAAA
ATCCAGAAATAGTRATCTACCAGTACATGGATGACTTATATGTAGGATCTGACTTAGAAATAGGGCAGCATAGAGCAAAA
ATAGAGGAATTAAGAGATCATCTACTGARATGGGGATTTACCACACCAGATAAAAAACATCAGAAAGAACCTCCATTTCT
TTGGATGGGATATGAGCTCCATCCTGACAAATGGACAGTACAGCCTATACAGCTGCCAGACAAGGAAAGCTGGACTGTCA
ATGATATACAAAAATTAGTGGGAAAACTAAATTGGGCAAGTCAAATTTATTCAGGGATTAAAGTAAAGCAATTATGTAAA
CTCCTTAGGGGGGCCAAATCACTAACAGACATAGTACCAATGACTGAAGAAGCAGAATTAGAATTGGCAGAGAACAGAGA
GATTCTAAGAGAACCGGTACATGGAGTCTACTATGACCCATCAAAAGAATTAATAGCAGAAGTACAGAAGCAAGGGCTCG
ACCAATGGACATATCAAATTTATCAAGAGCCATACAAAAATTTAAAAACAGGAAAGTATGCAAAAAGGGGGTCTGCCCAT
ACCAATGATGTAAGGCAATTAACAGAAGTAGTCCAAAAAATAGCCACAGAGAGCATAATAATATGGGGAAAARTTCCTAA
ATTTAAATTACCTATAAGGAAAGAAACATGGGAAGTATGGTGGACAGAATATTGGCAGGCCACCTGGATTCCTGAGTGGG
AATTTGTCAATACCCCTCCCCTAGTAAAGTTATGGTATCAACTAGAAACAGAACCCATACCAGGGGCAGACACTTAC
>KX389636.1:1486-3081 HIV-1 isolate 09NG010079 from Nigeria gag protein (gag) gene, complete cds; pol protein (pol) gene, partial cds; vif protein (vif), vpr protein (vpr), tat protein (tat), rev protein (rev), and vpu protein (vpu) genes, complete cds; envelope glycoprotein-like (env) gene, complete sequence; and nef protein (nef) gene, complete cds
CGACCCCTAGTCACAGTAAGAATAGGGGGAAAGCTAATAGAAGCCCTATTAGATACAGGAGCAGATGATACAGTATTAGA
ACAAATAGATTTACCAGGAAAATGGAAACCAAAGATGATAGGGGGAATTGGAGGGTTTATCAAAGTAAAACAGTATGATC
AAATAATGATAGAAATTGAAGGGAGAAAGGCTATAGGGACAGTATTAGTAGGACCTACACCTATCAACATAATTGGAAGA
AATATGTTGACTCAGATTGGTTGTACTTTAAATTTTCCAATTAGTACTATTGAAACTGTACCAGTAAAATTAAAGCCAGG
AATGGATGGCCCAAAGGTTAAACAATGGCCACTGACAAAAGAGAAAATAAAAGCATTAACAGAAATTTGTACAGAAATGG
AAAAGGAAGGGAAAATTTCAAAAATTGGGCCTGAAAACCCATACAACACTCCAATATTTGCCATAAAGAAAAAGGACAGT
ACTAAATGGAGAAAATTGGTAGATTTCAGAGAGCTTAATAAAAGAACTCAAGACTTCTGGGAGGTCCAATTAGGTATACC
TCATCCCGCGGGGTTAAAAAAGAAGAAATCAGTAACAGTACTAGATGTGGGAGATGCATATTTTTCAGTTCCCTTAGATG
AAAGTTTTAGAAAATATACTGCATTCACTATACCCAGTATAAATAATGAGACACCAGGGGTTAGATATCAATACAATGTG
CTTCCACAGGGATGGAAAGGATCTCCAGCAATATTTCAGAGTAGCATGACAAAAATCTTAGAGCCCTTTAGAACAAAAAA
TCCAGAAATGGTGATCTACCAATACATGGATGACTTATATGTAGGATCTAACTTAGAAATAGAGCAGCATAGAGCAAAAA
TAGAGGAATTAAGAAATCATTTAATGAAATGGGGATTTACTACACCAGATAAGAAACATCAGAAAGAACCCCCATTCCTT
TGGATGGGATACGAGCTCCATCCTGATAAATGGACAGTACAACCTATACAGTTGCCAGACAAGGAAAGCTGGACTGTCAA
TGATATACAAAAATTAGTAGGAAAACTAAATTGGGCAAGTCAGATTTATCCAGGGATTAAAGTAAAGCAACTATGTAAAC
TTCTTAGAGGGGCCAAAGCACTAACAGACATAGTACCACTGACTAAAGAAGCAGAATTGGAATTGGCAGAGAACAGGGAA
ATACTAAAAGAACCTGTACATGGAGTCTACTATGACCCATCAAAAGAATTAATAGCAGAAGTACAGAAACAAGGGCTCGA
CCAGTGGACATATCAAATTTATCAAGAGCCATACAAAAATCTGAAAACAGGAAAGTATGCAAAAAGGGGGTCAGCCCACA
CTAATGATGTAAAACAATTAACAGAAGTAGTGCAAAAAATAGCCACAGAGAGCATAGTAATATGGGGAAAAGTTCCTAAA
TTTAAACTACCCATAAGGAAAGAAACATGGGAAGTATGGTGGACAGAATATTGGCAGGCCACCTGGATTCCTGATTGGGA
GTTTGTCAATACCCCGCCTCTAGTAAAATTATGGTATCGGTTAGAATCAGAACCCATACCAGGAGCAGAAACTTAC
>KX389628.1:1485-3081 HIV-1 isolate 09NG010205 from Nigeria gag protein (gag) gene, complete cds; pol protein (pol) gene, partial cds; vif protein (vif) and vpr protein (vpr) genes, complete cds; tat protein-like (tat) and rev protein-like (rev) genes, complete sequence; vpu protein (vpu) gene, complete cds; envelope glycoprotein-like (env) gene, complete sequence; and nef protein (nef) gene, complete cds
ACGACCCCTGGTCACAGTAAGAATAGGGGGACAGCTAATAGAAGCTCTGTTAGACACAGGAGCAGATGATACAGTATTAG
AACAAATAAATTTACCAGGAAAGTGGAAACCAAAAATGATAGGGGGAATTGGAGGATTTATCAAAGTAAAACAGTATGAT
GAAATACTTATAGAAATTGAAGGGAAAAAGGCTATAGGGACAGTACTAGTAGGACCTACACCTATCAACATAATTGGGAG
AAATATGTTGACTCAGATTGGTTGTACTTTAAATTTTCCAATTAGTCCTATTGAGACTGTACCAGTAAAACTAAAGCCAG
GAATGGATGGCCCAAAGGTTAAACAATGGCCATTGACAGAAGAAAAAATAAAAGCATTAACAGAAATTTGTTTAGAAATG
GAAAAGGAAGGAAAAATTTCAAAAATTGGGCCTGAAAATCCATACAACACTCCAATATTTGCCATAAAGAAAAAAGACAG
TACTAAATGGAGAAAATTGGTAGATTTCAGGGAGCTTAATAAGAGAACTCAAGACTTCTGGGAGGTCCAATTAGGCATAC
CCCATCCCGCAGGGTTAAAAAAGAAAAAATCAGTAACAGTGCTAGATGTAGGGGATGCATATTTTTCAGTTCCCTTAGAT
GAGRACTTCAGAAAGTATACAGCATTCACTATACCTAGTGTAAATAACGAGACACCAGGGATTAGATATCAGTACAATGT
GCTCCCACAGGGATGGAAAGGATCACCAGCAATATTTCAGTGTAGCATGACAAAAATCTTAGAACCCTTTAGAGCAAATA
ATCCAGAAATGGTAATCTACCAATACATGGATGATTTATATGTAGGATCTGACTTAGAACTAGGACAACATAGAGCAAAA
ATAGAGGAGCTAAGAGAGCATCTACTAAGATGGGGGTTTACCACACCAGATAAAAAACATCAGAAAGAACCTCCATTCCT
TTGGATGGGATATGAGCTCCATCCTGACAAATGGACAGTACAACCTATAACGCTGCCACAAAAGGAAAACTGGACTGTCA
ATGATATACAAAAATTAGTGGGAAAACTAAATTGGGCAAGTCAGATTTATCAAGGGATTAAAGTAAAGAATTTATGTAAA
CTCCTTAGGGGGGCCAAAGCACTAACAGACATAGTACCACTGACTGAAGAAGCAGAATTAGAATTGGCAGAGAACAGGGA
AATTCTAAAAGAACCTGTACACGGAGTCTACTATGACTCATCGAAAGAACTAATAGCAGAAGTACAGAAACAAGGGCTTG
ACCAATGGACATATCAAATTTATCAAGAGCCATACAAAAACCTGAAAACAGGAAAGTATGCAAAAAGGGGGTCTGCCCAT
ACCAATGATGTAAAACAATTAACAGATCTAGTGCAAAAAATATCCAGGGAAAGCATAGTAATATGGGGAAAAGTTCCTAA
ATTTAAACTACCTATAAGGAAAGAAACATGGGAAGTATGGTGGACAGAATATTGGCAGGCCACCTGGATTCCTGATTGGG
AATTTGTCAATACCCCTCCTCTAGTAAAGTTATGGTATCGACTAGAAACAGAACCCATACCAGGAGCAGAAACTTAC
>KX389623.1:1476-3072 HIV-1 isolate 09NG010483 from Nigeria gag protein (gag) gene, complete cds; pol protein (pol) gene, partial cds; vif protein (vif), vpr protein (vpr), tat protein (tat), rev protein (rev), and vpu protein (vpu) genes, complete cds; envelope glycoprotein-like (env) gene, complete sequence; and nef protein (nef) gene, complete cds
ACGACCCTTAGTCACAGTAAAAATAGGGGGACAGCTAATAGAAGCCCTATTAGACACAGGAGCAGATGATACAGTGTTAG
AGGAAATAACTTTACCAGGAAAATGGAAACCAAAAATGATAGGGGGAATTGGAGGTTTTATCAAAGTAAGACAGTATGAT
CAGATACTTATGGAAATTTGTGGGAAAAAGGCCATAGGTACAGTATTAGTAGGACCTACACCTGTCAACATAATTGGACG
AAACATGTTGACTCAGATTGGCTGTACTTTAAATTTCCCAATTAGTCCTATTGAGACTGTACCAGTGAAATTAAAGCCAG
GAATGGATGGCCCAAAGATTAAACAATGGCCATTGACAGAAGAAAAAATAAAAGCATTAACAGAAATTTGTGCAGATATG
GAAAAGGAAGGAAAAATTTCAAAAGTTGGGCCTGAAAATCCATACAACACTCCAATATTTGCCATAAAGAAAAAAGACAG
TACTAAATGGAGAAAATTGGTAGATTTCAGAGAGCTCAATAAAAGAACTCAAGATTTTTGTGAGGTCCAATTAGGCATAC
CTCATCCCGCGGGATTAAAAAAGAAAAAATCAGTAACAGTACTAGATGTGGGAGATGCATATTTTTCAGTTCCCTTAGAT
GAAAACTTTAGAAAGTATACAGCATTCACTATACCTAGTATAAATAATGAGACACCAGGGATTAGATATCAGTACAATGT
GCTTCCACAGGGATGGAAAGGATCACCAGCAATATTTCAGAGTAGCATGACAAAAATCTTAGAACCTTTTAGAACAAAAA
ATCCAGAAATAGTGATCTACCAGTATATGGATGATTTGTATATAGGATCTGACTTGGAAATAGGGCAACATAGAGAAAAA
ATRGAGGAGTTGAGAGCTCATTTATTGAAATGGGGACTTACCACACCAGATAAAAAACATCAGAAAGAACCTCCATTCCT
TTGGATGGGATATGAGCTCCATCCTGACAAATGGACGGTACAGCCTATACAGCTGCCCGACAAGGAAGACTGGACTGTCA
ATGATATACAAAAATTAGTGGGTAAATTAAACTGGGCAAGTCAGATTTATCCAGGGATTAAAGTAAAGCAACTATGTAAA
CTCCTTAGGGGGGCCAAAGCACTCACAGACATAGTACCACTGACTGAAGAAGCAGAATTAGAATTGGCAGAGAACAGGGA
GATTCTAAAAGAACCTGTACATGGGGTCTACTATGACCCATCAAAAGACTTAATAGCAGAAATACAGAAACAAGGGCGTG
ACCAATGGACATATCAAATTTATCAAGAGCCATACAAAAATCTAAAAACAGGAAAGTATGCAAAAAGGGGGTCTGCCCAC
ACTAATGATATAAAACAATTAACAGAAGCAGTGCAAAAGATATCTGTAGAGAGCATAGTAATATGGGGAAAAGTTCCTAA
ATTTAAATTACCTATAAAGAAAGAAACGTGGGAAGTATGGTGGACAGAATATTGGCAGGCCACCTGGATTCCAGATTGGG
AATTTGTCAATACCCCTCCTCTAGTAAAGTTATGGTATCAATTAGAAACAGAACCCATACCAGGAGCAGAAACTTAC