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ReproSchema and Library: A JSON-LD schema to harmonize behavioral, cognitive, and neuropsych assessments #189

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sanuann opened this issue Jun 13, 2020 · 12 comments
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Americas hub Email ok git-1 can commit and push to a repository Hackathon project use this tag for submitted projects javascript some knowledge of javascript required neuropsychology behavioral, cognitive data python some knowledge of python required web frameworks web development frameworks or stacks

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@sanuann
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sanuann commented Jun 13, 2020

hi @ohbm/project-monitors: My project is ready!


Project info

Title:
ReproSchema and Library: A JSON-LD schema to harmonize behavioral, cognitive, and neuropsych assessments

Project lead:
Sanu Ann Abraham @sanuann, Satra Ghosh @satra

Timezone:
UTC-4

Hub:
The Americas

Description:
Harmonizing data after acquisition is resource intensive. ReproSchema is an attempt to harmonize data by design by enforcing consistency at the data acquisition stage.
An implementation of the schema can specify scoring logic, branching logic, and user interface rendering options. The schema allows internationalization (multiple languages), is implementation agnostic, and tracks variations in assessments (e.g., PHQ-9, PHQ-8).
This open and accessible schema library with appropriate conversion (e.g., to RedCap) and data collection tools (e.g., MindLogger, LORIS, RedCap) enables more consistent acquisition across projects, with results being harmonized by design.

Link to project: https://github.com/ReproNim/reproschema
https://github.com/ReproNim/reproschema-ui
https://github.com/sensein/voice-backend

Mattermost handle: @sanuann

Goals for the OHBM Brainhack

  • reproschema-starter-kit (non-coding)
  • adding new/verifying activities (non-coding)
  • adding new languages (non-coding)
  • validation library (requires coding)
  • create dashboard for collected results (requires coding)
  • improve schema-ui widgets (requires coding)

Good first issues:
ReproNim/reproschema#371
ReproNim/reproschema#377
ReproNim/reproschema-ui#141
ReproNim/reproschema-ui#129
ReproNim/reproschema-ui#125
and more.

Skills:

  • documentation, git
  • JSON-LD, SHACL
  • vuejs, javascript, python

Chat channel:
https://mattermost.brainhack.org/brainhack/channels/hbmhack-reproschema

Video channel:
Please have a look at the Mattermost channel (pinned posts) for the URL of the video channel, or alternatively, please contact to @sanuann on Mattermost.

Image for the OHBM brainhack website

Project submission

Submission checklist

Once the issue is submitted, please check items in this list as you add under 'Additional project info'

Please include the following above (all required):

  • Link to your project: could be a code repository, a shared document, etc. See here
  • Include your Mattermost handle (i.e. your username). If you do not have an account, please sign up here.
  • Goals for the OHBM Brainhack: describe what you want to achieve during this brainhack. See here.
  • Flesh out at least 2 "good first issues": those are tasks that do not require any prior knowledge about your project, could be defined as issues in a GitHub repository, or in a shared document, cf here.
  • Skills: list skills that would be particularly suitable for your project. We ask you to include at least one non-coding skill, cf. here.
  • Chat channel: A link to a chat channel that will be used during the OHBM Brainhack. This can be an existing channel or a new one. We recommend using the Brainhack space on mattermost, cf. here.
  • Video channel: Please create a video channel that will be used during the OHBM Brainhack and share it in your chat channel above. This can be an existing channel or a new one. For instance a jitsi meet room, cf. here.
  • Provide an image of your project for the OHBM brainhack website

You can also include information about (all optional):

  • Number of participants, cf. here
  • Twitter-size summary of your project pitch, cf. here
  • Set up a kanban board on your repository to better divide the work and keep track of things, cf here
  • Project snippet for the OHBM Brainhack website, cf. here

We would like to think about how you will credit and onboard new members to your project. We recommend reading references from this section. If you'd like to share your thoughts with future project participants, you can include information about (recommended):

  • Specify how will you acknowledge contributions (e.g. listing members on a contributing page).
  • Provide links to onboarding documents if you have some.
@sanuann sanuann added the Hackathon project use this tag for submitted projects label Jun 13, 2020
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welcome bot commented Jun 13, 2020

Welcome Banner (Image: CC-BY license, The Turing Way Community, & Scriberia. Zenodo. http://doi.org/10.5281/zenodo.3332808)
🎉 Welcome to the 2020 OHBM Hackathon! 🎉 We're really excited to have your input on this repository and welcome your idea! 💖 If you haven't done so already, please make sure you check out our Code of Conduct. Did you issue a new hackathon project? Please check if you have provided all relevant information and an image for the website.

@jhlegarreta jhlegarreta added Americas hub python some knowledge of python required neuropsychology behavioral, cognitive data labels Jun 13, 2020
@Remi-Gau Remi-Gau self-assigned this Jun 13, 2020
@jhlegarreta jhlegarreta added git-1 can commit and push to a repository javascript some knowledge of javascript required web frameworks web development frameworks or stacks labels Jun 13, 2020
@complexbrains
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Dear @sanuann Thank you very much for your project submission. Could we ask you to create good two issues either in your Github repo and give the link in the issue, please?

Also, would you mind sharing a snippet regarding your project if you want it to be listed in the https://ohbm.github.io/hackathon2020/ webpage, please?

As soon as we got them from you the review procedure will be completed and your project will be ready for the Brainhack!

We look forward to hearing from you.

@jhlegarreta
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@sanuann @satra looking good ! As @complexbrains suggests, you may want to share a short description so that the project gets added to the website. In order to catch the attention of attendees, an image specific to your project would also be useful.

So you can open the PR or else, as @complexbrains says, you can share them here and we will open the PR. Thanks 🚀 !

In case you want to open the corresponding PR, see for example PR #191 to know which file should be modified. The image should be placed here.

@sanuann
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sanuann commented Jun 13, 2020

@jhlegarreta I don't have a specific image for my project. but can perhaps use the one of our organization?

@jhlegarreta
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@jhlegarreta I don't have a specific image for my project. but can perhaps use the one of our organization?

We can use the default one yes: just so that you know, how it would look like, it is a question mark, as you can see here.

Then, can you share the appropriate description, please?

@sanuann
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sanuann commented Jun 14, 2020

I've already updated the description @jhlegarreta

@DorienHuijser
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Hi @sanuann, is there an image that you would like to display with your project on the hackathon website? If so, let me know. Thanks!

@Remi-Gau
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Hi @sanuann, is there an image that you would like to display with your project on the hackathon website? If so, let me know. Thanks!

Sorry @DorienHuijser.
Forgot to update you on that one: @sanuann said we should use this one for now.

https://avatars1.githubusercontent.com/u/18501735?s=200&v=4

@jhlegarreta
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I've already updated the description @jhlegarreta

Awesome @sanuann . The description is already updated in the website !

@Remi-Gau @DorienHuijser image added in PR #208.

@jhlegarreta
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@sanuann do you have a video channel for your project? Would you add that information to the mattermost channel, please? Thanks.

@sanuann
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sanuann commented Jun 14, 2020

@sanuann do you have a video channel for your project? Would you add that information to the mattermost channel, please? Thanks.

I've pinned that to the hbmhack-reproschema channel.

@complexbrains
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Dear @sanuann your project looks ready to go! Welcome aboard! 🤗 🎊

@Remi-Gau Remi-Gau removed their assignment Jul 31, 2023
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