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[BUG]: Kafka Source stage - Hight CPU usage (>= 100%) - idle consumer #1587

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nuxwin opened this issue Apr 2, 2024 · 11 comments
Open
2 tasks done

[BUG]: Kafka Source stage - Hight CPU usage (>= 100%) - idle consumer #1587

nuxwin opened this issue Apr 2, 2024 · 11 comments
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bug Something isn't working external This issue was filed by someone outside of the Morpheus team

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@nuxwin
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nuxwin commented Apr 2, 2024

Version

24.3

Which installation method(s) does this occur on?

Docker, Source

Describe the bug.

100% CPU (core) usage while normal CPU usage expected.

Increasing value of the poll_interval doesn't change anything, even
when set to 2s.

Minimum reproducible example

The following pipeline allows to reproduce the bug :


#!/opt/conda/envs/morpheus/bin/python

import logging
import click

from morpheus.config import Config
from morpheus.config import CppConfig
from morpheus.messages.message_meta import MessageMeta
from morpheus.pipeline import LinearPipeline
from morpheus.stages.general.monitor_stage import MonitorStage
from morpheus.stages.input.kafka_source_stage import KafkaSourceStage
from morpheus.utils.logger import configure_logging

logger = logging.getLogger("morpheus.{__name__}")


@click.command()
@click.option(
    "--num_threads",
    default=1,
    type=click.IntRange(min=1),
    help="Number of internal pipeline threads to use.",
)
@click.option(
    "--pipeline_batch_size",
    default=1,
    type=click.IntRange(min=1),
    help=("Internal batch size for the pipeline. Can be much larger than the model batch size. "
          "Also used for Kafka consumers."),
)
@click.option(
    '--bootstrap_servers',
    default='ai-pf-kafka-server:9092',
    help="Comma-separated list of bootstrap servers."
)
@click.option(
    '--input_topic',
    type=str,
    default='ai-pf-input',
    help="Name of the Kafka topic from which messages will be consumed."
)
@click.option(
    '--group_id',
    type=str,
    default='ai-pf',
    help="Kafka input data consumer group identifier."
)
def run_pipeline(num_threads, pipeline_batch_size, bootstrap_servers, input_topic, group_id):
    configure_logging(log_level=logging.DEBUG)

    CppConfig.set_should_use_cpp(False)

    config = Config()
    config.num_threads = num_threads
    config.pipeline_batch_size = pipeline_batch_size

    pipeline = LinearPipeline(config)

    pipeline.set_source(KafkaSourceStage(
        config,
        bootstrap_servers=bootstrap_servers,
        input_topic=input_topic,
        group_id=group_id
    ))

    pipeline.add_stage(MonitorStage(config, description="Source rate"))

    pipeline.run()


if __name__ == "__main__":
    run_pipeline()

Relevant log output

(morpheus) nuxwin@morpheus-konzeptplus:~/projects/git/konzeptplus/nvidia/ai-pf-m-ml-001/.docker$ docker compose run ai-pf-morpheus-pipeline bash
[+] Creating 1/1
 ✔ Container ai-pf-triton-server  Created                                                                                                                                                                                                                                           0.1s 
[+] Running 1/1
 ✔ Container ai-pf-triton-server  Started                                                                                                                                                                                                                                           0.3s               
(morpheus) root@dfaa48a1f8db:/workspace# hight_cpu_usage_pipeline.py 
====Pipeline Pre-build====
====Pre-Building Segment: linear_segment_0====
====Pre-Building Segment Complete!====
====Pipeline Pre-build Complete!====
====Registering Pipeline====
====Building Pipeline====
====Building Pipeline Complete!====
Source rate: 0 messages [00:00, ? messages/s]====Registering Pipeline Complete!====
Source rate: 0 messages [00:00, ? messages/s]====Starting Pipeline====
====Pipeline Started====
====Building Segment: linear_segment_0====
Added source: <from-kafka-0; KafkaSourceStage(bootstrap_servers=ai-pf-kafka-server:9092, input_topic=ai-pf-input, group_id=ai-pf, client_id=None, poll_interval=10millis, disable_commit=False, disable_pre_filtering=False, auto_offset_reset=AutoOffsetReset.LATEST, stop_after=0, async_commits=True)>
  └─> morpheus.MessageMeta
Added stage: <monitor-1; MonitorStage(description=Source rate, smoothing=0.05, unit=messages, delayed_start=False, determine_count_fn=None, log_level=LogLevels.INFO)>
  └─ morpheus.MessageMeta -> morpheus.MessageMeta
====Building Segment Complete!====
Source rate: 0 messages [00:08, ? messages/s]

Full env printout

Click here to see environment details
 **git***
 Not inside a git repository
 
 ***OS Information***
 DISTRIB_ID=Ubuntu
 DISTRIB_RELEASE=22.04
 DISTRIB_CODENAME=jammy
 DISTRIB_DESCRIPTION="Ubuntu 22.04.4 LTS"
 PRETTY_NAME="Ubuntu 22.04.4 LTS"
 NAME="Ubuntu"
 VERSION_ID="22.04"
 VERSION="22.04.4 LTS (Jammy Jellyfish)"
 VERSION_CODENAME=jammy
 ID=ubuntu
 ID_LIKE=debian
 HOME_URL="https://www.ubuntu.com/"
 SUPPORT_URL="https://help.ubuntu.com/"
 BUG_REPORT_URL="https://bugs.launchpad.net/ubuntu/"
 PRIVACY_POLICY_URL="https://www.ubuntu.com/legal/terms-and-policies/privacy-policy"
 UBUNTU_CODENAME=jammy
 Linux dfaa48a1f8db 6.1.0-18-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.76-1 (2024-02-01) x86_64 x86_64 x86_64 GNU/Linux
 
 ***GPU Information***
 Tue Apr  2 05:03:51 2024
 +-----------------------------------------------------------------------------------------+
 | NVIDIA-SMI 550.54.15              Driver Version: 550.54.15      CUDA Version: 12.4     |
 |-----------------------------------------+------------------------+----------------------+
 | GPU  Name                 Persistence-M | Bus-Id          Disp.A | Volatile Uncorr. ECC |
 | Fan  Temp   Perf          Pwr:Usage/Cap |           Memory-Usage | GPU-Util  Compute M. |
 |                                         |                        |               MIG M. |
 |=========================================+========================+======================|
 |   0  NVIDIA GeForce RTX 4070        On  |   00000000:01:00.0 Off |                  N/A |
 |  0%   42C    P8             13W /  200W |     224MiB /  12282MiB |      0%      Default |
 |                                         |                        |                  N/A |
 +-----------------------------------------+------------------------+----------------------+
 
 +-----------------------------------------------------------------------------------------+
 | Processes:                                                                              |
 |  GPU   GI   CI        PID   Type   Process name                              GPU Memory |
 |        ID   ID                                                               Usage      |
 |=========================================================================================|
 |    0   N/A  N/A    654033      C   tritonserver                                  218MiB |
 +-----------------------------------------------------------------------------------------+
 
 ***CPU***
 Architecture:                       x86_64
 CPU op-mode(s):                     32-bit, 64-bit
 Address sizes:                      39 bits physical, 48 bits virtual
 Byte Order:                         Little Endian
 CPU(s):                             10
 On-line CPU(s) list:                0-9
 Vendor ID:                          GenuineIntel
 Model name:                         13th Gen Intel(R) Core(TM) i5-13600KF
 CPU family:                         6
 Model:                              183
 Thread(s) per core:                 1
 Core(s) per socket:                 10
 Socket(s):                          1
 Stepping:                           1
 BogoMIPS:                           6988.20
 Flags:                              fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush mmx fxsr sse sse2 ss ht syscall nx pdpe1gb rdtscp lm constant_tsc rep_good nopl xtopology cpuid pni pclmulqdq vmx ssse3 fma cx16 sse4_1 sse4_2 x2apic movbe popcnt tsc_deadline_timer aes xsave avx f16c rdrand hypervisor lahf_lm abm 3dnowprefetch cpuid_fault ssbd ibrs ibpb stibp ibrs_enhanced tpr_shadow vnmi flexpriority ept vpid ept_ad fsgsbase tsc_adjust bmi1 avx2 smep bmi2 erms invpcid rdseed adx smap clflushopt clwb sha_ni xsaveopt xsavec xgetbv1 xsaves avx_vnni arat umip pku ospke waitpkg gfni vaes vpclmulqdq rdpid movdiri movdir64b fsrm md_clear serialize flush_l1d arch_capabilities
 Virtualization:                     VT-x
 L1d cache:                          320 KiB (10 instances)
 L1i cache:                          320 KiB (10 instances)
 L2 cache:                           40 MiB (10 instances)
 L3 cache:                           16 MiB (1 instance)
 NUMA node(s):                       1
 NUMA node0 CPU(s):                  0-9
 Vulnerability Gather data sampling: Not affected
 Vulnerability Itlb multihit:        Not affected
 Vulnerability L1tf:                 Not affected
 Vulnerability Mds:                  Not affected
 Vulnerability Meltdown:             Not affected
 Vulnerability Mmio stale data:      Not affected
 Vulnerability Retbleed:             Not affected
 Vulnerability Spec rstack overflow: Not affected
 Vulnerability Spec store bypass:    Mitigation; Speculative Store Bypass disabled via prctl
 Vulnerability Spectre v1:           Mitigation; usercopy/swapgs barriers and __user pointer sanitization
 Vulnerability Spectre v2:           Mitigation; Enhanced IBRS, IBPB conditional, RSB filling, PBRSB-eIBRS SW sequence
 Vulnerability Srbds:                Not affected
 Vulnerability Tsx async abort:      Not affected
 
 ***CMake***
 
 ***g++***
 /usr/bin/g++
 g++ (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0
 Copyright (C) 2021 Free Software Foundation, Inc.
 This is free software; see the source for copying conditions.  There is NO
 warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
 
 
 ***nvcc***
 /opt/conda/envs/morpheus/bin/nvcc
 nvcc: NVIDIA (R) Cuda compiler driver
 Copyright (c) 2005-2023 NVIDIA Corporation
 Built on Mon_Apr__3_17:16:06_PDT_2023
 Cuda compilation tools, release 12.1, V12.1.105
 Build cuda_12.1.r12.1/compiler.32688072_0
 
 ***Python***
 /opt/conda/envs/morpheus/bin/python
 Python 3.10.14
 
 ***Environment Variables***
 PATH                            : /opt/conda/envs/morpheus/bin:/opt/conda/condabin:/usr/local/nvidia/bin:/usr/local/cuda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/conda/bin:/opt/konzeptplus/morpheus/pipelines/inference:/opt/konzeptplus/morpheus/pipelines/mlflow:/opt/konzeptplus/morpheus/pipelines/training
 LD_LIBRARY_PATH                 : /usr/local/nvidia/lib:/usr/local/nvidia/lib64
 NUMBAPRO_NVVM                   :
 NUMBAPRO_LIBDEVICE              :
 CONDA_PREFIX                    : /opt/conda/envs/morpheus
 PYTHON_PATH                     :
 
 ***conda packages***
 /opt/conda/condabin/conda
 # packages in environment at /opt/conda/envs/morpheus:
 #
 # Name                    Version                   Build  Channel
 _libgcc_mutex             0.1                 conda_forge    conda-forge
 _openmp_mutex             4.5                       2_gnu    conda-forge
 absl-py                   1.4.0              pyhd8ed1ab_0    conda-forge
 adagio                    0.2.4              pyhd8ed1ab_0    conda-forge
 alabaster                 0.7.16             pyhd8ed1ab_0    conda-forge
 alembic                   1.13.1             pyhd8ed1ab_1    conda-forge
 aniso8601                 9.0.1              pyhd8ed1ab_0    conda-forge
 annotated-types           0.6.0              pyhd8ed1ab_0    conda-forge
 antlr-python-runtime      4.11.1             pyhd8ed1ab_0    conda-forge
 antlr4-python3-runtime    4.11.1             pyh1a96a4e_0    conda-forge
 appdirs                   1.4.4              pyh9f0ad1d_0    conda-forge
 argon2-cffi               23.1.0                   pypi_0    pypi
 argon2-cffi-bindings      21.2.0                   pypi_0    pypi
 asn1crypto                1.5.1              pyhd8ed1ab_0    conda-forge
 astunparse                1.6.3                    pypi_0    pypi
 atk-1.0                   2.38.0               hd4edc92_1    conda-forge
 attrs                     23.2.0             pyh71513ae_0    conda-forge
 aws-c-auth                0.7.11               h0b4cabd_1    conda-forge
 aws-c-cal                 0.6.9                h14ec70c_3    conda-forge
 aws-c-common              0.9.12               hd590300_0    conda-forge
 aws-c-compression         0.2.17               h572eabf_8    conda-forge
 aws-c-event-stream        0.4.1                h97bb272_2    conda-forge
 aws-c-http                0.8.0                h9129f04_2    conda-forge
 aws-c-io                  0.14.0               hf8f278a_1    conda-forge
 aws-c-mqtt                0.10.1               h2b97f5f_0    conda-forge
 aws-c-s3                  0.4.9                hca09fc5_0    conda-forge
 aws-c-sdkutils            0.1.13               h572eabf_1    conda-forge
 aws-checksums             0.1.17               h572eabf_7    conda-forge
 aws-crt-cpp               0.26.0               h04327c0_8    conda-forge
 aws-sdk-cpp               1.11.210            hba3e011_10    conda-forge
 babel                     2.14.0             pyhd8ed1ab_0    conda-forge
 betterproto               1.2.5              pyhd3deb0d_1    conda-forge
 blas                      1.0                         mkl    conda-forge
 blinker                   1.7.0              pyhd8ed1ab_0    conda-forge
 bokeh                     3.4.0              pyhd8ed1ab_0    conda-forge
 boost-cpp                 1.84.0               h44aadfe_1    conda-forge
 brotli                    1.1.0                hd590300_1    conda-forge
 brotli-bin                1.1.0                hd590300_1    conda-forge
 brotli-python             1.1.0           py310hc6cd4ac_1    conda-forge
 bzip2                     1.0.8                hd590300_5    conda-forge
 c-ares                    1.27.0               hd590300_0    conda-forge
 ca-certificates           2024.2.2             hbcca054_0    conda-forge
 cachetools                5.3.3              pyhd8ed1ab_0    conda-forge
 cairo                     1.18.0               h3faef2a_0    conda-forge
 cattrs                    23.2.3             pyhd8ed1ab_0    conda-forge
 certifi                   2024.2.2           pyhd8ed1ab_0    conda-forge
 cffi                      1.16.0          py310h2fee648_0    conda-forge
 charset-normalizer        3.3.2              pyhd8ed1ab_0    conda-forge
 click                     8.1.7           unix_pyh707e725_0    conda-forge
 cloudpickle               3.0.0              pyhd8ed1ab_0    conda-forge
 colorama                  0.4.6              pyhd8ed1ab_0    conda-forge
 configargparse            1.5.5              pyhd8ed1ab_0    conda-forge
 configparser              6.0.1              pyhd8ed1ab_0    conda-forge
 contourpy                 1.2.0           py310hd41b1e2_0    conda-forge
 cryptography              42.0.5          py310h75e40e8_0    conda-forge
 cuda-cccl_linux-64        12.1.109             ha770c72_0    conda-forge
 cuda-cudart               12.1.105             hd3aeb46_0    conda-forge
 cuda-cudart-dev           12.1.105             hd3aeb46_0    conda-forge
 cuda-cudart-dev_linux-64  12.1.105             h59595ed_0    conda-forge
 cuda-cudart-static        12.1.105             hd3aeb46_0    conda-forge
 cuda-cudart-static_linux-64 12.1.105             h59595ed_0    conda-forge
 cuda-cudart_linux-64      12.1.105             h59595ed_0    conda-forge
 cuda-cupti                12.1.105             h59595ed_0    conda-forge
 cuda-libraries            12.1.0                        0    nvidia
 cuda-nvcc-dev_linux-64    12.1.105             ha770c72_0    conda-forge
 cuda-nvcc-impl            12.1.105             hd3aeb46_0    conda-forge
 cuda-nvcc-tools           12.1.105             hd3aeb46_0    conda-forge
 cuda-nvrtc                12.1.105             hd3aeb46_0    conda-forge
 cuda-nvtx                 12.1.105             h59595ed_0    conda-forge
 cuda-opencl               12.1.105             h59595ed_0    conda-forge
 cuda-python               12.4.0          py310h9f9f131_1    conda-forge
 cuda-runtime              12.1.0                        0    nvidia
 cuda-version              12.1                 h1d6eff3_3    conda-forge
 cudf                      24.02.02        cuda12_py310_240227_gdd34fdbe35_0    rapidsai
 cupy                      13.0.0          py310h7aad9d2_3    conda-forge
 cupy-core                 13.0.0          py310had4011e_3    conda-forge
 cycler                    0.12.1             pyhd8ed1ab_0    conda-forge
 cyrus-sasl                2.1.27               h54b06d7_7    conda-forge
 cytoolz                   0.12.3          py310h2372a71_0    conda-forge
 dask                      2024.2.1           pyhd8ed1ab_0    conda-forge
 dask-core                 2024.2.1           pyhd8ed1ab_0    conda-forge
 dask-cuda                 24.02.00        py310_240212_g96bedbc_0    rapidsai
 dask-cudf                 24.02.02        cuda12_py310_240227_gdd34fdbe35_0    rapidsai
 databricks-cli            0.18.0             pyhd8ed1ab_0    conda-forge
 databricks-connect        14.3.1                   pypi_0    pypi
 databricks-sdk            0.23.0                   pypi_0    pypi
 dataclasses               0.8                pyhc8e2a94_3    conda-forge
 datacompy                 0.10.5             pyhd8ed1ab_0    conda-forge
 dill                      0.3.7              pyhd8ed1ab_0    conda-forge
 distributed               2024.2.1           pyhd8ed1ab_0    conda-forge
 dlpack                    0.5                  h9c3ff4c_0    conda-forge
 docker-py                 5.0.3              pyhd8ed1ab_4    conda-forge
 docker-pycreds            0.4.0                      py_0    conda-forge
 docutils                  0.20.1          py310hff52083_3    conda-forge
 elastic-transport         8.12.0             pyhd8ed1ab_0    conda-forge
 elasticsearch             8.9.0              pyhd8ed1ab_0    conda-forge
 entrypoints               0.4                pyhd8ed1ab_0    conda-forge
 environs                  9.5.0                    pypi_0    pypi
 exceptiongroup            1.2.0              pyhd8ed1ab_2    conda-forge
 expat                     2.6.2                h59595ed_0    conda-forge
 fastrlock                 0.8.2           py310hc6cd4ac_2    conda-forge
 feedparser                6.0.10             pyhd8ed1ab_0    conda-forge
 filelock                  3.13.1             pyhd8ed1ab_0    conda-forge
 flask                     3.0.2              pyhd8ed1ab_0    conda-forge
 flatbuffers               24.3.7                   pypi_0    pypi
 fmt                       10.2.1               h00ab1b0_0    conda-forge
 font-ttf-dejavu-sans-mono 2.37                 hab24e00_0    conda-forge
 font-ttf-inconsolata      3.000                h77eed37_0    conda-forge
 font-ttf-source-code-pro  2.038                h77eed37_0    conda-forge
 font-ttf-ubuntu           0.83                 h77eed37_1    conda-forge
 fontconfig                2.14.2               h14ed4e7_0    conda-forge
 fonts-conda-ecosystem     1                             0    conda-forge
 fonts-conda-forge         1                             0    conda-forge
 fonttools                 4.50.0          py310h2372a71_0    conda-forge
 freetype                  2.12.1               h267a509_2    conda-forge
 fribidi                   1.0.10               h36c2ea0_0    conda-forge
 fs                        2.4.16             pyhd8ed1ab_0    conda-forge
 fsspec                    2024.3.1           pyhca7485f_0    conda-forge
 fugue                     0.8.7              pyhd8ed1ab_0    conda-forge
 fugue-sql-antlr           0.2.0              pyhd8ed1ab_0    conda-forge
 gast                      0.5.4                    pypi_0    pypi
 gdk-pixbuf                2.42.10              h829c605_5    conda-forge
 gettext                   0.21.1               h27087fc_0    conda-forge
 gflags                    2.2.2             he1b5a44_1004    conda-forge
 giflib                    5.2.1                h0b41bf4_3    conda-forge
 gitdb                     4.0.11             pyhd8ed1ab_0    conda-forge
 gitpython                 3.1.42             pyhd8ed1ab_0    conda-forge
 glog                      0.6.0                h6f12383_0    conda-forge
 gmock                     1.14.0               ha770c72_1    conda-forge
 gmp                       6.3.0                h59595ed_1    conda-forge
 gmpy2                     2.1.2           py310h3ec546c_1    conda-forge
 google-auth               2.29.0                   pypi_0    pypi
 google-auth-oauthlib      1.2.0                    pypi_0    pypi
 google-pasta              0.2.0                    pypi_0    pypi
 googleapis-common-protos  1.63.0             pyhd8ed1ab_0    conda-forge
 graphene                  3.3                pyhd8ed1ab_0    conda-forge
 graphite2                 1.3.13            h58526e2_1001    conda-forge
 graphql-core              3.2.3              pyhd8ed1ab_0    conda-forge
 graphql-relay             3.2.0              pyhd8ed1ab_0    conda-forge
 graphviz                  9.0.0                h78e8752_1    conda-forge
 greenlet                  3.0.3           py310hc6cd4ac_0    conda-forge
 grpcio                    1.60.0                   pypi_0    pypi
 grpcio-status             1.60.0                   pypi_0    pypi
 grpclib                   0.4.7              pyhd8ed1ab_0    conda-forge
 gtest                     1.14.0               h00ab1b0_1    conda-forge
 gtk2                      2.24.33              h280cfa0_4    conda-forge
 gts                       0.7.6                h977cf35_4    conda-forge
 gunicorn                  21.2.0          py310hff52083_1    conda-forge
 h2                        4.1.0              pyhd8ed1ab_0    conda-forge
 h5py                      3.10.0                   pypi_0    pypi
 harfbuzz                  8.3.0                h3d44ed6_0    conda-forge
 hpack                     4.0.0              pyh9f0ad1d_0    conda-forge
 hyperframe                6.0.1              pyhd8ed1ab_0    conda-forge
 icu                       73.2                 h59595ed_0    conda-forge
 idna                      3.6                pyhd8ed1ab_0    conda-forge
 imagesize                 1.4.1              pyhd8ed1ab_0    conda-forge
 importlib-metadata        7.1.0              pyha770c72_0    conda-forge
 importlib_metadata        7.1.0                hd8ed1ab_0    conda-forge
 importlib_resources       6.3.2              pyhd8ed1ab_0    conda-forge
 intel-openmp              2022.1.0          h9e868ea_3769
 itsdangerous              2.1.2              pyhd8ed1ab_0    conda-forge
 jinja2                    3.1.3              pyhd8ed1ab_0    conda-forge
 joblib                    1.3.2              pyhd8ed1ab_0    conda-forge
 keras                     2.15.0                   pypi_0    pypi
 keyutils                  1.6.1                h166bdaf_0    conda-forge
 kiwisolver                1.4.5           py310hd41b1e2_1    conda-forge
 krb5                      1.21.2               h659d440_0    conda-forge
 lcms2                     2.16                 hb7c19ff_0    conda-forge
 ld_impl_linux-64          2.40                 h41732ed_0    conda-forge
 lerc                      4.0.0                h27087fc_0    conda-forge
 libabseil                 20230802.1      cxx17_h59595ed_0    conda-forge
 libarrow                  14.0.2          h7303f25_3_cuda    conda-forge
 libarrow-acero            14.0.2          h27087fc_3_cuda    conda-forge
 libarrow-dataset          14.0.2          h27087fc_3_cuda    conda-forge
 libarrow-flight           14.0.2          hc63cbfb_3_cuda    conda-forge
 libarrow-flight-sql       14.0.2          hd924b76_3_cuda    conda-forge
 libarrow-gandiva          14.0.2          hfa8be3f_3_cuda    conda-forge
 libarrow-substrait        14.0.2          hd924b76_3_cuda    conda-forge
 libblas                   3.9.0            16_linux64_mkl    conda-forge
 libboost                  1.84.0               h8013b2b_1    conda-forge
 libboost-devel            1.84.0               h00ab1b0_1    conda-forge
 libboost-headers          1.84.0               ha770c72_1    conda-forge
 libbrotlicommon           1.1.0                hd590300_1    conda-forge
 libbrotlidec              1.1.0                hd590300_1    conda-forge
 libbrotlienc              1.1.0                hd590300_1    conda-forge
 libcblas                  3.9.0            16_linux64_mkl    conda-forge
 libclang                  18.1.1                   pypi_0    pypi
 libcrc32c                 1.1.2                h9c3ff4c_0    conda-forge
 libcublas                 12.1.0.26                     0    nvidia
 libcudf                   24.02.02        cuda12_240227_gdd34fdbe35_0    rapidsai
 libcufft                  11.0.2.4                      0    nvidia
 libcufile                 1.6.1.9              hd3aeb46_0    conda-forge
 libcufile-dev             1.6.1.9              hd3aeb46_0    conda-forge
 libcurand                 10.3.2.106           hd3aeb46_0    conda-forge
 libcurl                   8.6.0                hca28451_0    conda-forge
 libcusolver               11.4.4.55                     0    nvidia
 libcusparse               12.0.2.55                     0    nvidia
 libdeflate                1.19                 hd590300_0    conda-forge
 libedit                   3.1.20191231         he28a2e2_2    conda-forge
 libev                     4.33                 hd590300_2    conda-forge
 libevent                  2.1.12               hf998b51_1    conda-forge
 libexpat                  2.6.2                h59595ed_0    conda-forge
 libffi                    3.4.2                h7f98852_5    conda-forge
 libgcc-ng                 13.2.0               h807b86a_5    conda-forge
 libgd                     2.3.3                h119a65a_9    conda-forge
 libgfortran-ng            13.2.0               h69a702a_5    conda-forge
 libgfortran5              13.2.0               ha4646dd_5    conda-forge
 libglib                   2.80.0               hf2295e7_1    conda-forge
 libgomp                   13.2.0               h807b86a_5    conda-forge
 libgoogle-cloud           2.12.0               h5206363_4    conda-forge
 libgrpc                   1.59.3               hd6c4280_0    conda-forge
 libhwloc                  2.9.2           default_h554bfaf_1009    conda-forge
 libiconv                  1.17                 hd590300_2    conda-forge
 libjpeg-turbo             3.0.0                hd590300_1    conda-forge
 libkvikio                 24.02.01        cuda12_240226_gfe01c15_0    rapidsai
 liblapack                 3.9.0            16_linux64_mkl    conda-forge
 libllvm14                 14.0.6               hcd5def8_4    conda-forge
 libllvm15                 15.0.7               hb3ce162_4    conda-forge
 libmrc                    24.03.00a       cuda_12.1_h0dae25b_20    nvidia/label/dev
 libnghttp2                1.58.0               h47da74e_1    conda-forge
 libnl                     3.9.0                hd590300_0    conda-forge
 libnpp                    12.0.2.50                     0    nvidia
 libnsl                    2.0.1                hd590300_0    conda-forge
 libntlm                   1.4               h7f98852_1002    conda-forge
 libnvjitlink              12.1.105             hd3aeb46_0    conda-forge
 libnvjpeg                 12.1.1.14                     0    nvidia
 libopenblas               0.3.26          pthreads_h413a1c8_0    conda-forge
 libparquet                14.0.2          habd00f8_3_cuda    conda-forge
 libpng                    1.6.43               h2797004_0    conda-forge
 libprotobuf               4.24.4               hf27288f_0    conda-forge
 librdkafka                1.9.2                ha5a0de0_2    conda-forge
 libre2-11                 2023.09.01           h7a70373_1    conda-forge
 librmm                    24.02.00             h82930bc_1    conda-forge
 librsvg                   2.56.3               he3f83f7_1    conda-forge
 libsqlite                 3.45.2               h2797004_0    conda-forge
 libssh2                   1.11.0               h0841786_0    conda-forge
 libstdcxx-ng              13.2.0               h7e041cc_5    conda-forge
 libthrift                 0.19.0               hb90f79a_1    conda-forge
 libtiff                   4.6.0                ha9c0a0a_2    conda-forge
 libutf8proc               2.8.0                h166bdaf_0    conda-forge
 libuuid                   2.38.1               h0b41bf4_0    conda-forge
 libuv                     1.48.0               hd590300_0    conda-forge
 libwebp                   1.3.2                h658648e_1    conda-forge
 libwebp-base              1.3.2                hd590300_0    conda-forge
 libxcb                    1.15                 h0b41bf4_0    conda-forge
 libxcrypt                 4.4.36               hd590300_1    conda-forge
 libxml2                   2.12.6               h232c23b_0    conda-forge
 libzlib                   1.2.13               hd590300_5    conda-forge
 llvm-openmp               15.0.7               h0cdce71_0    conda-forge
 llvmlite                  0.42.0          py310h1b8f574_1    conda-forge
 locket                    1.0.0              pyhd8ed1ab_0    conda-forge
 lz4                       4.3.3           py310h350c4a5_0    conda-forge
 lz4-c                     1.9.4                hcb278e6_0    conda-forge
 mako                      1.3.2              pyhd8ed1ab_0    conda-forge
 markdown                  3.6                pyhd8ed1ab_0    conda-forge
 markdown-it-py            3.0.0              pyhd8ed1ab_0    conda-forge
 markupsafe                2.1.5           py310h2372a71_0    conda-forge
 marshmallow               3.21.1                   pypi_0    pypi
 matplotlib-base           3.8.3           py310h62c0568_0    conda-forge
 mdurl                     0.1.2              pyhd8ed1ab_0    conda-forge
 merlin-core               23.08.00                   py_0    nvidia
 merlin-dataloader         23.08.00                   py_0    nvidia
 milvus                    2.3.5                    pypi_0    pypi
 minio                     7.2.5                    pypi_0    pypi
 mkl                       2022.1.0           hc2b9512_224
 ml-dtypes                 0.2.0                    pypi_0    pypi
 mlflow                    2.9.2           py310ha13cd29_0    conda-forge
 morpheus                  24.03.00a       cuda_12.1_py3.10_g7bb4ec23_64    file://localhost/opt/conda/conda-bld
 mpc                       1.3.1                hfe3b2da_0    conda-forge
 mpfr                      4.2.1                h9458935_0    conda-forge
 mpmath                    1.3.0              pyhd8ed1ab_0    conda-forge
 mrc                       24.03.00a       cuda_12.1_py310_h572eed8_20    nvidia/label/dev
 msgpack-python            1.0.7           py310hd41b1e2_0    conda-forge
 multidict                 6.0.5           py310h2372a71_0    conda-forge
 munkres                   1.1.4              pyh9f0ad1d_0    conda-forge
 ncurses                   6.4.20240210         h59595ed_0    conda-forge
 networkx                  2.8.8              pyhd8ed1ab_0    conda-forge
 nlohmann_json             3.9.1                h9c3ff4c_1    conda-forge
 npy-append-array          0.9.16             pyhd8ed1ab_0    conda-forge
 numba                     0.59.0          py310h7dc5dd1_1    conda-forge
 numpy                     1.24.4          py310ha4c1d20_0    conda-forge
 numpydoc                  1.5.0              pyhd8ed1ab_0    conda-forge
 nvcomp                    3.0.6                h10b603f_0    conda-forge
 nvidia-cublas-cu12        12.2.5.6                 pypi_0    pypi
 nvidia-cuda-cupti-cu12    12.2.142                 pypi_0    pypi
 nvidia-cuda-nvcc-cu12     12.2.140                 pypi_0    pypi
 nvidia-cuda-nvrtc-cu12    12.2.140                 pypi_0    pypi
 nvidia-cuda-runtime-cu12  12.2.140                 pypi_0    pypi
 nvidia-cudnn-cu12         8.9.4.25                 pypi_0    pypi
 nvidia-cufft-cu12         11.0.8.103               pypi_0    pypi
 nvidia-curand-cu12        10.3.3.141               pypi_0    pypi
 nvidia-cusolver-cu12      11.5.2.141               pypi_0    pypi
 nvidia-cusparse-cu12      12.1.2.141               pypi_0    pypi
 nvidia-nccl-cu12          2.16.5                   pypi_0    pypi
 nvidia-nvjitlink-cu12     12.2.140                 pypi_0    pypi
 nvtabular                 23.08.00                py310_0    nvidia
 nvtx                      0.2.10          py310h2372a71_0    conda-forge
 oauthlib                  3.2.2              pyhd8ed1ab_0    conda-forge
 ocl-icd                   2.3.2                hd590300_1    conda-forge
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 opt-einsum                3.3.0                    pypi_0    pypi
 orc                       1.9.2                h4b38347_0    conda-forge
 ordered-set               4.1.0              pyhd8ed1ab_0    conda-forge
 packaging                 23.2               pyhd8ed1ab_0    conda-forge
 pandas                    1.5.3           py310h9b08913_1    conda-forge
 pango                     1.52.1               ha41ecd1_0    conda-forge
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 pillow                    10.2.0          py310h01dd4db_0    conda-forge
 pip                       24.0               pyhd8ed1ab_0    conda-forge
 pixman                    0.43.2               h59595ed_0    conda-forge
 platformdirs              4.2.0              pyhd8ed1ab_0    conda-forge
 pluggy                    1.3.0              pyhd8ed1ab_0    conda-forge
 prometheus_client         0.20.0             pyhd8ed1ab_0    conda-forge
 prometheus_flask_exporter 0.23.0             pyhd8ed1ab_0    conda-forge
 protobuf                  4.24.4          py310h620c231_0    conda-forge
 psutil                    5.9.8           py310h2372a71_0    conda-forge
 pthread-stubs             0.4               h36c2ea0_1001    conda-forge
 py4j                      0.10.9.7                 pypi_0    pypi
 pyarrow                   14.0.2          py310h9a2f4d7_3_cuda    conda-forge
 pyarrow-hotfix            0.6                pyhd8ed1ab_0    conda-forge
 pyasn1                    0.5.1                    pypi_0    pypi
 pyasn1-modules            0.3.0                    pypi_0    pypi
 pycparser                 2.21               pyhd8ed1ab_0    conda-forge
 pycryptodome              3.20.0                   pypi_0    pypi
 pydantic                  2.6.4              pyhd8ed1ab_0    conda-forge
 pydantic-core             2.16.3          py310hcb5633a_0    conda-forge
 pygments                  2.17.2             pyhd8ed1ab_0    conda-forge
 pyjwt                     2.8.0              pyhd8ed1ab_1    conda-forge
 pymilvus                  2.3.6                    pypi_0    pypi
 pynvjitlink               0.1.14          py310hdaa3023_0    rapidsai
 pynvml                    11.4.1             pyhd8ed1ab_0    conda-forge
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 pyparsing                 3.1.2              pyhd8ed1ab_0    conda-forge
 pysocks                   1.7.1              pyha2e5f31_6    conda-forge
 python                    3.10.14         hd12c33a_0_cpython    conda-forge
 python-confluent-kafka    1.9.2           py310h5764c6d_2    conda-forge
 python-dateutil           2.9.0              pyhd8ed1ab_0    conda-forge
 python-dotenv             1.0.1                    pypi_0    pypi
 python-graphviz           0.20.2             pyh717bed2_0    conda-forge
 python-rapidjson          1.16            py310hc6cd4ac_0    conda-forge
 python_abi                3.10                    4_cp310    conda-forge
 pytorch                   2.2.1           py3.10_cuda12.1_cudnn8.9.2_0    pytorch
 pytorch-cuda              12.1                 ha16c6d3_5    pytorch
 pytorch-mutex             1.0                        cuda    pytorch
 pytz                      2023.4             pyhd8ed1ab_0    conda-forge
 pywin32-on-windows        0.1.0              pyh1179c8e_3    conda-forge
 pyyaml                    6.0.1           py310h2372a71_1    conda-forge
 qpd                       0.4.4              pyhd8ed1ab_1    conda-forge
 querystring_parser        1.2.4                      py_0    conda-forge
 rapids-dask-dependency    24.02.00a11                   0    rapidsai-nightly
 rdma-core                 50.0                 hd3aeb46_1    conda-forge
 re2                       2023.09.01           h7f4b329_1    conda-forge
 readline                  8.2                  h8228510_1    conda-forge
 requests                  2.31.0             pyhd8ed1ab_0    conda-forge
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 requests-oauthlib         1.4.0                    pypi_0    pypi
 requests-toolbelt         1.0.0              pyhd8ed1ab_0    conda-forge
 rich                      13.7.1             pyhd8ed1ab_0    conda-forge
 rmm                       24.02.00        cuda12_py310_240212_g09b406c1_0    rapidsai
 rsa                       4.9                      pypi_0    pypi
 s2n                       1.4.1                h06160fa_0    conda-forge
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 setuptools                69.2.0             pyhd8ed1ab_0    conda-forge
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 six                       1.16.0             pyh6c4a22f_0    conda-forge
 sleef                     3.5.1                h9b69904_2    conda-forge
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 sphinxcontrib-applehelp   1.0.8              pyhd8ed1ab_0    conda-forge
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 sphinxcontrib-qthelp      1.0.7              pyhd8ed1ab_0    conda-forge
 sphinxcontrib-serializinghtml 1.1.10             pyhd8ed1ab_0    conda-forge
 sqlalchemy                1.4.49          py310h2372a71_1    conda-forge
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 stringcase                1.2.0                      py_0    conda-forge
 sympy                     1.12            pypyh9d50eac_103    conda-forge
 tabulate                  0.9.0              pyhd8ed1ab_1    conda-forge
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 tensorboard               2.15.2                   pypi_0    pypi
 tensorboard-data-server   0.7.2                    pypi_0    pypi
 tensorflow                2.15.0.post1             pypi_0    pypi
 tensorflow-estimator      2.15.0                   pypi_0    pypi
 tensorflow-io-gcs-filesystem 0.36.0                   pypi_0    pypi
 tensorflow-metadata       1.13.1             pyhd8ed1ab_0    conda-forge
 termcolor                 2.4.0                    pypi_0    pypi
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 tk                        8.6.13          noxft_h4845f30_101    conda-forge
 toolz                     0.12.1             pyhd8ed1ab_0    conda-forge
 torchtriton               2.2.0                     py310    pytorch
 tornado                   6.4             py310h2372a71_0    conda-forge
 tqdm                      4.66.2             pyhd8ed1ab_0    conda-forge
 triad                     0.9.6              pyhd8ed1ab_0    conda-forge
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 typing-extensions         4.10.0               hd8ed1ab_0    conda-forge
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 typing_utils              0.1.0              pyhd8ed1ab_0    conda-forge
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 url-normalize             1.4.3              pyhd8ed1ab_0    conda-forge
 urllib3                   2.2.1              pyhd8ed1ab_0    conda-forge
 watchdog                  3.0.0           py310hff52083_1    conda-forge
 websocket-client          1.7.0              pyhd8ed1ab_0    conda-forge
 websockets                12.0            py310h2372a71_0    conda-forge
 werkzeug                  3.0.1              pyhd8ed1ab_0    conda-forge
 wheel                     0.42.0             pyhd8ed1ab_0    conda-forge
 wrapt                     1.14.1                   pypi_0    pypi
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 xorg-libxdmcp             1.1.3                h7f98852_0    conda-forge
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 xorg-xextproto            7.3.0             h0b41bf4_1003    conda-forge
 xorg-xproto               7.0.31            h7f98852_1007    conda-forge
 xyzservices               2023.10.1          pyhd8ed1ab_0    conda-forge
 xz                        5.2.6                h166bdaf_0    conda-forge
 yaml                      0.2.5                h7f98852_2    conda-forge
 zict                      3.0.0              pyhd8ed1ab_0    conda-forge
 zipp                      3.17.0             pyhd8ed1ab_0    conda-forge
 zlib                      1.2.13               hd590300_5    conda-forge
 zstd                      1.5.5                hfc55251_0    conda-forge

Other/Misc.

Capture d’écran 2024-04-02 à 06 56 42

Code of Conduct

  • I agree to follow Morpheus' Code of Conduct
  • I have searched the open bugs and have found no duplicates for this bug report
@nuxwin nuxwin added the bug Something isn't working label Apr 2, 2024
@jarmak-nv jarmak-nv added Needs Triage Need team to review and classify external This issue was filed by someone outside of the Morpheus team labels Apr 2, 2024
@jarmak-nv
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Hi @nuxwin!

Thanks for submitting this issue - our team has been notified and we'll get back to you as soon as we can!
In the mean time, feel free to add any relevant information to this issue.

@mdemoret-nv
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@nuxwin Does this happen without the Monitor stage?

@nuxwin
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nuxwin commented Apr 3, 2024

@mdemoret-nv Of Course, yes.

@nuxwin
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nuxwin commented Apr 3, 2024

@mdemoret-nv This doesn't seem directly related to the kafka source stage anyway. I'm wondering if this is not due to the asyncio loop. I get the same problem with the below pipeline. For us, this look like a big problem for a production use.

#!/opt/conda/envs/morpheus/bin/python

import logging
import click
import pandas as pd
import time

from morpheus.config import Config, CppConfig, PipelineModes
from morpheus.messages.message_meta import MessageMeta
from morpheus.pipeline.linear_pipeline import LinearPipeline
from morpheus.pipeline.stage_decorator import source, stage
from morpheus.utils.logger import configure_logging


logger = logging.getLogger("morpheus.{__name__}")


@source
def source_generator() -> Generator[MessageMeta, None, None]:
    while True:
        time.sleep(5)
        yield MessageMeta(df=pd.DataFrame({'a': [1, 2, 3], 'b': [4, 5, 6]}))


@stage
def simple_stage(message: MessageMeta) -> MessageMeta:
    logger.debug(f"simple_stage:\n\n{message.df.to_string()}")
    return message


@click.command()
@click.option(
    "--num_threads",
    default=1,
    type=click.IntRange(min=1),
    help="Number of internal pipeline threads to use.",
)
@click.option(
    "--pipeline_batch_size",
    default=1,
    type=click.IntRange(min=1),
    help="Internal batch size for the pipeline. Can be much larger than the model batch size",
)
def run_pipeline(num_threads, pipeline_batch_size):
    configure_logging(log_level=logging.DEBUG)

    CppConfig.set_should_use_cpp(False)

    config = Config()
    config.mode = PipelineModes.OTHER
    config.num_threads = num_threads
    config.pipeline_batch_size = pipeline_batch_size

    pipeline = LinearPipeline(config)

    pipeline.set_source(source_generator(config))
    pipeline.add_stage(simple_stage(config))

    pipeline.run()


if __name__ == "__main__":
    run_pipeline()

@nuxwin
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nuxwin commented Apr 9, 2024

Any new ?

@mdemoret-nv
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mdemoret-nv commented Apr 9, 2024

I'm wondering if this is not due to the asyncio loop

I'm suspecting the same thing. Its possible the asyncio loop is just polling for changes and seeing nothing scheduled so it just repeats the process until there is some work.

For us, this look like a big problem for a production use.

Can you elaborate more on why this would be a big problem for production use for you? If the high CPU usage is due to the asyncio loop, it likely is not impacting performance of the pipeline. The loop is only spinning because there is no other work to do. Once messages are in the pipeline, they will occupy the CPU instead of the asyncio loop.

@mdemoret-nv mdemoret-nv removed the Needs Triage Need team to review and classify label Apr 9, 2024
@nuxwin
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nuxwin commented Apr 9, 2024

@mdemoret-nv

The problem is the hight CPU (core) usage >=100% at full time. The machine's fans speeding up because of this. I wonder if this could reduce the lifespan of the CPU. I don't think that having a CPU core at 100% is something normal, especially when there is no other processing than a polling. There should be a sleep or sth like this between each polling, assuming that the problem come from the loop. Often, the high CPU usage are encoutered in while(true) loops when there is no sleep, especially when no treatment is made.

Hope you get my English .

@mdemoret-nv
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Yes I understand what you are saying. I agree that the pipeline should not be utilizing 100% of the CPU if there is no work to be processed. We will need to look into why the asyncio loop is consistently spinning. A simple solution could be to schedule a small sleep in the loop when there is no more work.

I was wondering if there was anything specific to your deployment where 100% CPU utilization would cause problems beyond the added energy use and wear and tear. For example, some environments utilize the CPU utilization to scale their system. If the CPU was always at 100%, then it would scale infinitely which would be a problem. And the solution I suggested above may not work in that environment.

@efajardo-nv
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@nuxwin Also note that top by default shows the sum of utilization across all CPU cores so if you have 12 cores, the maximum utilization would be 1200%. You can check the number of cores using the command nproc --all. You can also do Shift+i while in top to see average utilization per core.

@nuxwin
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nuxwin commented Apr 9, 2024

I was wondering if there was anything specific to your deployment where 100% CPU utilization would cause problems beyond the added energy use and wear and tear. For example, some environments utilize the CPU utilization to scale their system. If the CPU was always at 100%, then it would scale infinitely which would be a problem. And the solution I suggested above may not work in that environment.

We are developing for financial entities, among other. Our clients make use of ESXi VMs (using NVIDIA vGPUs). They won't accept such CPU usage on an "idle" pipeline.

Thank you for your time. That's much appreciated.

@nuxwin
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nuxwin commented Apr 9, 2024

@nuxwin Also note that top by default shows the sum of utilization across all CPU cores so if you have 12 cores, the maximum utilization would be 1200%. You can check the number of cores using the command nproc --all. You can also do Shift+i while in top to see average utilization per core.

I'm talking about a CPU core which is 100% used, not about the CPU usage average ;) So yeah, of course, for a machine with 10 cores, average usage would be reduced to 10%. But the problem remain : there is a core that is 100% used, all the time.

@nuxwin nuxwin changed the title [BUG]: Kafka Source stage - Hight CPU usage (>= 100%) - Iddle consumer [BUG]: Kafka Source stage - Hight CPU usage (>= 100%) - idle consumer Apr 9, 2024
@mdemoret-nv mdemoret-nv added this to the 24.10 - Release milestone Aug 16, 2024
@mdemoret-nv mdemoret-nv assigned yczhang-nv and unassigned cwharris Aug 18, 2024
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