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docs: README

docs: README #30

Workflow file for this run

name: Pkgdown Multi
on:
push:
tags:
- "v*"
branches:
- main
- develop
pull_request:
types:
- opened
- synchronize
- reopened
- ready_for_review
branches:
- main
paths:
- inst/templates/**
- _pkgdown.yaml
- DESCRIPTION
- "**.md"
- "**.Rmd"
- man/**
- LICENSE.*
- NAMESPACE
workflow_dispatch:
workflow_call:
secrets:
REPO_GITHUB_TOKEN:
description: |
Github token with read access to repositories, required for staged.dependencies installation
required: false
inputs:
install-system-dependencies:
description: Check for and install system dependencies
required: false
default: false
type: boolean
fail-pkgdown-on-warnings:
description: Fail the pkgdown workflow if warnings are generated while generating docs
required: false
default: false
type: boolean
enable-staged-dependencies-check:
description: Enable staged dependencies YAML check
required: false
default: false
type: boolean
additional-env-vars:
description: |
Extra environment variables, as a 'key=value' pair, with each pair on a new line.
Example usage:
additional-env-vars: |
ABC=123
XYZ=456
required: false
default: ""
type: string
refs-order:
description: |
The order in which refs should appear in the drop-down list. Versions not in the vector
will appear below refs listed here.
If docs have never been generated for the ref, the ref will not appear in the
drop-down. Similarly, if docs have been generated for the ref, but the ref is not
listed in the vector, it will not appear in the drop-down.
required: false
default: c("devel", "pre-release", "main", "latest-tag")
type: string
default-landing-page:
description:
The default branch or tag on gh-pages that corresponds to the landing page.
For instance, if your root index page on gh-pages is built using the 'main'
branch, then the root page of the website will correspond to this page.
If 'latest-tag' is selected, then the latest version will become the default.
required: false
default: main
type: string
sd-direction:
description: The direction to use to install staged dependencies. Choose between 'upstream', 'downstream' and 'all'
required: false
type: string
default: upstream
# If you provide latest-tag-alt-name and/or release-candidate-alt-name inputs
# to this workflow in some repo, you should also provide these inputs in
# R CMD check and Coverage workflows in order to make the unit test report
# and coverage report available in pkgdown documentation for the alt-names.
# Additionally, branches-or-tags-to-list input should be overridden with
# the additional alt-name inputs.
latest-tag-alt-name:
description: An alternate name for the 'latest-tag' documentation item
required: false
type: string
default: ""
release-candidate-alt-name:
description: An alternate name for the 'release-candidate' documentation item
required: false
type: string
default: ""
branches-or-tags-to-list:
description: Which branches or tags should be listed under the
'Versions' dropdown menu on the landing page?
This input should be a regular expression in R.
required: false
type: string
default: >-
^main$|^devel$|^pre-release$|^latest-tag$|^release-candidate$|^develop$|^v([0-9]+\\.)?([0-9]+\\.)?([0-9]+)|^v([0-9]+\\.)?([0-9]+\\.)?([0-9]+)(-rc[0-9]+)$
package-subdirectory:
description: Subdirectory in the repository, where the R package is located.
required: false
type: string
default: "."
additional-unit-test-report-directories:
description: |
If any *additional* unit test report directories are generated by the build-check-install workflow,
they should be listed as comma-separated directory list. If this input is empty, only coverage-report
and unit-test-report directories will be retained in the generated documentation directory.
Example:
unit-test-report-as-cran,unit-test-report-not-cran
required: false
type: string
default: ""
concurrency:
group: docs-${{ github.event.pull_request.number || github.ref }}
cancel-in-progress: true
jobs:
docs:
name: Generate 🐣
runs-on: ubuntu-latest
if: >
!contains(github.event.commits[0].message, '[skip docs]')
&& github.event.pull_request.draft == false
container:
image: ghcr.io/insightsengineering/rstudio:latest
steps:
- name: Setup token 🔑
id: github-token
run: |
if [ "${{ secrets.REPO_GITHUB_TOKEN }}" == "" ]; then
echo "REPO_GITHUB_TOKEN is empty. Substituting it with GITHUB_TOKEN."
echo "token=${{ secrets.GITHUB_TOKEN }}" >> $GITHUB_OUTPUT
else
echo "Using REPO_GITHUB_TOKEN."
echo "token=${{ secrets.REPO_GITHUB_TOKEN }}" >> $GITHUB_OUTPUT
fi
shell: bash
- name: Get branch names 🌿
id: branch-name
uses: tj-actions/branch-names@v8
- name: Get current branch or tag 🏷️
id: current-branch-or-tag
run: |
if [ "${{ steps.branch-name.outputs.is_tag }}" == "true" ]; then
echo "Current tag: ${{ steps.branch-name.outputs.tag }}"
echo "ref-name=${{ steps.branch-name.outputs.tag }}" >> $GITHUB_OUTPUT
else
echo "Current branch: ${{ steps.branch-name.outputs.current_branch }}"
echo "ref-name=${{ steps.branch-name.outputs.current_branch }}" >> $GITHUB_OUTPUT
fi
shell: bash
- name: Checkout repo (PR) 🛎
uses: actions/[email protected]
if: github.event_name == 'pull_request'
with:
ref: ${{ steps.branch-name.outputs.head_ref_branch }}
path: ${{ github.event.repository.name }}
repository: ${{ github.event.pull_request.head.repo.full_name }}
- name: Checkout repo 🛎
uses: actions/[email protected]
if: github.event_name != 'pull_request'
with:
ref: ${{ steps.branch-name.outputs.head_ref_branch }}
path: ${{ github.event.repository.name }}
- name: Check commit message 💬
run: |
git config --global --add safe.directory $(pwd)
export head_commit_message="$(git show -s --format=%B | tr '\r\n' ' ' | tr '\n' ' ')"
echo "head_commit_message = $head_commit_message"
if [[ $head_commit_message == *"$SKIP_INSTRUCTION"* ]]; then
echo "Skip instruction detected - cancelling the workflow."
exit 1
fi
shell: bash
working-directory: ${{ github.event.repository.name }}
env:
SKIP_INSTRUCTION: "[skip docs]"
- name: Restore SD cache 💰
uses: actions/cache@v4
with:
key: sd-${{ runner.os }}-${{ github.event.repository.name }}
path: ~/.staged.dependencies
- name: Run Staged dependencies 🎦
uses: insightsengineering/staged-dependencies-action@v2
env:
GITHUB_PAT: ${{ steps.github-token.outputs.token }}
with:
path: ${{ github.event.repository.name }}/${{ inputs.package-subdirectory }}
enable-check: ${{ inputs.enable-staged-dependencies-check }}
run-system-dependencies: ${{ inputs.install-system-dependencies }}
direction: ${{ inputs.sd-direction }}
- name: Install R package 🚧
run: |
if (file.exists("renv.lock")) renv::restore()
install.packages(".", repos=NULL, type="source")
shell: Rscript {0}
working-directory: ${{ github.event.repository.name }}/${{ inputs.package-subdirectory }}
- name: Build docs 🏗
if: >
github.event_name == 'pull_request' || startsWith(github.ref, 'refs/tags/v')
|| github.event_name == 'push'
run: |
repo="${{ github.event.repository.name }}"
if [ "${{ inputs.additional-env-vars }}" != "" ]
then {
echo -e "${{ inputs.additional-env-vars }}" > /tmp/dotenv.env
export $(tr '\n' ' ' < /tmp/dotenv.env)
}
fi
Rscript - <<EOF 2>&1 | tee pkgdown_${repo}.log
if (file.exists("renv.lock")) renv::restore()
pkgdown::build_site(devel = TRUE)
EOF
if [ "${{ inputs.fail-pkgdown-on-warnings }}" == "true" ]; then {
grep "Warning message" pkgdown_${repo}.log > pkgdown_warnings_${repo}.log
if [[ $(wc -l <pkgdown_warnings_${repo}.log) -gt 0 ]]; then {
echo "----------------------------------------"
echo "⚠ One or more warnings were generated during the pkgdown build."
echo "Please 🙏 fix the warnings shown above 👆"
exit 1
}
fi
}
fi
shell: bash
working-directory: ${{ github.event.repository.name }}/${{ inputs.package-subdirectory }}
- name: Checkout gh-pages 🛎
if: startsWith(github.ref, 'refs/tags/v') || github.event_name == 'push'
uses: actions/[email protected]
with:
path: "gh-pages"
fetch-depth: 0
ref: "gh-pages"
- name: Upload docs to gh-pages 📙
if: startsWith(github.ref, 'refs/tags/v') || github.event_name == 'push'
run: |
GH_PAGES_DIR="gh-pages/${{ steps.current-branch-or-tag.outputs.ref-name }}"
mkdir -p $GH_PAGES_DIR
echo "Current contents of $GH_PAGES_DIR:"
ls -l $GH_PAGES_DIR
# Remove any existing documentation for the git tag, but retain coverage report and
# unit test reports which might have already been pushed to the gh-pages branch
# by the coverage and build-check-install workflows respectively.
directories_to_retain="coverage-report,unit-test-report"
if [[ "${{ inputs.additional-unit-test-report-directories }}" != "" ]]; then
directories_to_retain="${directories_to_retain},${{ inputs.additional-unit-test-report-directories }}"
fi
IFS=',' read -ra DIRECTORIES_TO_RETAIN <<< "$directories_to_retain"
echo "The following directories will be retained:"
for dir in "${DIRECTORIES_TO_RETAIN[@]}"; do
echo "$dir"
done
# Remove all files from GH_PAGES_DIR, except any DIRECTORIES_TO_RETAIN.
find $GH_PAGES_DIR -mindepth 1 -maxdepth 1 -print0 | while IFS= read -r -d '' file; do
file_to_be_removed="true"
# Check if the file/directory matches any directory to be retained.
for dir in "${DIRECTORIES_TO_RETAIN[@]}"; do
if [[ "$GH_PAGES_DIR/$dir" == "$file" ]]; then
echo "Not removing $file"
file_to_be_removed="false"
fi
done
if [[ "$file_to_be_removed" == "true" ]]; then
echo "Removing $file"
rm -rf "$file"
fi
done
echo "::group::gh-pages contents"
echo "Current contents of $GH_PAGES_DIR:"
ls -l $GH_PAGES_DIR
echo "::endgroup::"
# Copy generated pkgdown documentation to gh-pages branch.
cp -a ${{ github.event.repository.name }}/${{ inputs.package-subdirectory }}/docs/. $GH_PAGES_DIR
echo "::group::gh-pages contents"
echo "Current contents of $GH_PAGES_DIR:"
ls -l $GH_PAGES_DIR
echo "::endgroup::"
cd gh-pages
git config --global user.email "41898282+github-actions[bot]@users.noreply.github.com"
git config --global user.name "github-actions[bot]"
git config pull.rebase false
git status
# Random delay
sleep $((RANDOM % 10))
git pull origin gh-pages || true
git add -f .
git commit -m "Update pkgdown documentation ${{ github.sha }}" || true
git push origin gh-pages
shell: bash
- name: Create documentation artifact 📂
if: github.event_name == 'pull_request' || startsWith(github.ref, 'refs/tags/v')
run: |
pushd ${{ github.event.repository.name }}/${{ inputs.package-subdirectory }}/docs/
zip -r9 $OLDPWD/pkgdown.zip *
popd
shell: bash
- name: Upload docs for review ⬆
if: github.event_name == 'pull_request' || startsWith(github.ref, 'refs/tags/v')
uses: actions/upload-artifact@v4
with:
name: pkgdown.zip
path: pkgdown.zip
multi-version-docs:
name: Multi-version docs 📑
needs: docs
runs-on: ubuntu-latest
if: >
(github.event_name == 'push' || github.event_name == 'workflow_dispatch')
&& !contains(github.event.commits[0].message, '[skip docs]')
steps:
- name: Checkout repo 🛎
uses: actions/[email protected]
with:
path: ${{ github.event.repository.name }}
ref: "gh-pages"
- name: Normalize inputs 📄
id: normalize
run: |
DEFAULT_LANDING_PAGE="${{ inputs.default-landing-page }}"
if [ "$DEFAULT_LANDING_PAGE" == "" ]
then {
DEFAULT_LANDING_PAGE=main
}
fi
echo "default-landing-page=$DEFAULT_LANDING_PAGE" >> "$GITHUB_ENV"
shell: bash
- name: Create and publish docs ↗️
uses: insightsengineering/r-pkgdown-multiversion@v3
with:
path: ${{ github.event.repository.name }}
default-landing-page: ${{ env.default-landing-page }}
refs-order: ${{ inputs.refs-order }}
latest-tag-alt-name: ${{ inputs.latest-tag-alt-name }}
release-candidate-alt-name: ${{ inputs.release-candidate-alt-name }}
branches-or-tags-to-list: ${{ inputs.branches-or-tags-to-list }}
upload-release-assets:
name: Upload documentation assets 🔼
needs: docs
runs-on: ubuntu-latest
if: >
startsWith(github.ref, 'refs/tags/v')
&& !contains(github.event.commits[0].message, '[skip docs]')
steps:
- name: Checkout repo 🛎
uses: actions/[email protected]
- name: Download artifact ⏬
uses: actions/download-artifact@v4
with:
name: pkgdown.zip
- name: Check if release exists ❓
id: check-if-release-exists
uses: insightsengineering/release-existence-action@v1
- name: Upload binaries to release ⤴
if: >-
steps.check-if-release-exists.outputs.release-exists == 'true'
uses: svenstaro/upload-release-action@v2
with:
repo_token: ${{ secrets.GITHUB_TOKEN }}
file: pkgdown.zip
asset_name: pkgdown.zip
tag: ${{ github.ref }}
overwrite: true