From 362b67aafa37b2bb2d2f8c520aabb4cbe2709312 Mon Sep 17 00:00:00 2001 From: Chris Markiewicz Date: Tue, 21 Feb 2023 08:34:02 -0500 Subject: [PATCH] ENH: Upgrade to miniconda 23.1.0-1, update dependencies --- Dockerfile | 52 ++++++++++++++++++++++++++-------------------------- 1 file changed, 26 insertions(+), 26 deletions(-) diff --git a/Dockerfile b/Dockerfile index c7f1e91..ff9e521 100644 --- a/Dockerfile +++ b/Dockerfile @@ -53,8 +53,8 @@ ENV LANG="en_US.UTF-8" \ # Leave these args here to better use the Docker build cache # miniconda index: https://conda.io/en/latest/miniconda_hashes.html ENV CONDA_PATH="/opt/conda" -ARG CONDA_VERSION=py39_4.12.0 -ARG SHA256SUM=78f39f9bae971ec1ae7969f0516017f2413f17796670f7040725dd83fcff5689 +ARG CONDA_VERSION=py39_23.1.0-1 +ARG SHA256SUM=5dc619babc1d19d6688617966251a38d245cb93d69066ccde9a013e1ebb5bf18 RUN wget --quiet https://repo.anaconda.com/miniconda/Miniconda3-${CONDA_VERSION}-Linux-x86_64.sh -O miniconda.sh && \ echo "${SHA256SUM} miniconda.sh" > miniconda.sha256 && \ @@ -78,50 +78,50 @@ COPY condarc /root/.condarc RUN ${CONDA_PATH}/bin/conda install mamba -n base && \ mamba install -y \ - attrs=21.4 \ + attrs=22.2 \ codecov=2.1 \ colorclass=2.2 \ coverage=6.3 \ - curl=7.83 \ - datalad=0.16 \ + curl=7.88 \ + datalad=0.18 \ dipy=1.5 \ flake8=4.0 \ - git=2.35 \ + git=2.39 \ graphviz=3.0 \ - h5py=3.6 \ - indexed_gzip=1.6 \ + h5py=3.8 \ + indexed_gzip=1.7 \ jinja2=3.1 \ - libxml2=2.9 \ + libxml2=2.10 \ libxslt=1.1 \ lockfile=0.12 \ matplotlib=3.5 \ mkl=2022.1 \ mkl-service=2.4 \ - nibabel=3.2 \ + nibabel=4.0 \ nilearn=0.9 \ nipype=1.8 \ nitime=0.9 \ - nodejs=16 \ - numpy=1.22 \ - packaging=21.3 \ - pandas=1.4 \ - pandoc=2.18 \ - pbr=5.9 \ - pip=22.0 \ + nodejs=18 \ + numpy=1.24 \ + packaging=23.0 \ + pandas=1.5 \ + pandoc=2.19 \ + pbr=5.11 \ + pip=23.0 \ pockets=0.9 \ psutil=5.9 \ pydot=1.4 \ - pytest=7.1 \ - pytest-cov=3.0 \ - pytest-env=0.6 \ - pytest-xdist=2.5 \ + pytest=7.2 \ + pytest-cov=4.0 \ + pytest-env=0.8 \ + pytest-xdist=3.2 \ pyyaml=6.0 \ - requests=2.27 \ + requests=2.28 \ scikit-image=0.19 \ - scikit-learn=1.1 \ - scipy=1.8 \ - seaborn=0.11 \ - setuptools=62.3 \ + scikit-learn=1.2 \ + scipy=1.10 \ + seaborn=0.12 \ + setuptools=65 \ sphinx=4.5 \ sphinx_rtd_theme=1.0 \ svgutils=0.3 \