Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Update workflow to generate pickle file using schematic #517

Open
anngvu opened this issue Aug 30, 2024 · 0 comments
Open

Update workflow to generate pickle file using schematic #517

anngvu opened this issue Aug 30, 2024 · 0 comments

Comments

@anngvu
Copy link
Collaborator

anngvu commented Aug 30, 2024

According to upcoming schematic release notes for their feature https://sagebionetworks.jira.com/browse/FDS-1795, providing a graph pickle file may speed up some things through skipping model re-parsing. This is more important for larger models like HTAN, but providing a pickle can help test how much of a difference it makes for NF.

Since the CLI does not have parity yet (schematic schema convert does not convert to pickle), use the API: https://schematic.api.sagebionetworks.org/v1/ui/#/Schema%20Operation/schematic_api.api.routes.get_schema_pickle

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
Status: No status
Development

No branches or pull requests

1 participant