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pyproject.toml
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pyproject.toml
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[build-system]
requires = ["poetry-core>=1.0.0", "poetry-dynamic-versioning>=1.0.0,<2.0.0"]
build-backend = "poetry_dynamic_versioning.backend"
[tool.poetry-dynamic-versioning]
enable = true
[tool.poetry]
name = "BraTS-Toolkit"
version = "0.0.0" # will be overwritten by poetry-dynamic-versioning but needs to be set
description = "BraTS Toolkit is a holistic approach to brain tumor segmentation allowing to build modular pipeliens for preprocessing, segmentation and fusion of segmentations."
license = "AGPL-3.0"
authors = [
"Florian Kofler <[email protected]>",
"Christoph Berger <[email protected]>",
"Isra Mekki <[email protected]>",
"Mahyar Valizadeh <[email protected]>",
"Marcel Rosier <[email protected]>",
]
maintainers = [
"Florian Kofler <[email protected]>",
"Isra Mekki <[email protected]>",
"Mahyar Valizadeh <[email protected]>",
"Marcel Rosier <[email protected]>",
]
readme = "README.md"
repository = "https://github.com/neuronflow/BraTS-Toolkit"
documentation = "https://brats-toolkit.readthedocs.io/en/latest/"
keywords = [
"brain tumor",
"glioma",
"BraTS",
"segmentation",
"fusion",
"skullstripping",
"brain extraction",
]
classifiers = [
"Programming Language :: Python :: 3",
"License :: OSI Approved :: GNU Affero General Public License v3",
"Operating System :: OS Independent",
]
[tool.poetry.dependencies]
python = "^3.10"
# core
SimpleITK = "^2.3.1"
numpy = "^1.23.0"
python-engineio = "^3.14.2"
python-socketio = "^4.6.1"
requests = "^2.24.0"
# pretty citation reminder
rich = "^13.6.0"
[tool.poetry.dev-dependencies]
pytest = "^6.2"
[tool.poetry.scripts]
brats-segment = 'brats_toolkit.cli:segmentation'
brats-fuse = 'brats_toolkit.cli:fusion'
brats-batch-preprocess = 'brats_toolkit.cli:batchpreprocess'
brats-preprocess = 'brats_toolkit.cli:singlepreprocess'
[tool.poetry.group.docs]
optional = true
[tool.poetry.group.docs.dependencies]
Sphinx = ">=7.0.0"
sphinx-copybutton = ">=0.5.2"
sphinx-rtd-theme = ">=1.3.0"
myst-parser = ">=2.0.0"