This is a development repo of the work presented in the article "Integrating Mendelian randomization and literature-mined evidence for breast cancer risk factors".
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Pre-print on MedRxiv: https://www.medrxiv.org/content/10.1101/2022.07.19.22277795v1
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See Github Pages site with links to web-based components of this article.
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Poster about this work that was presented at Mendelian Randomization Conference 2021.
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Poster based on the pre-print presented at International Genetic Epidemiology Society meeting 2022 (Paris).
├── README.md
├── project_code/
│ ├── 01_MR_related/
│ │ ├── MR_codebase_summary.md # see this file for MR-related analysis documentation
│ │ ├── results/
│ │ └── scripts/
│ ├── 02_literature_related/
│ │ ├── Literature_codebase_summary.md # see this file for literature analysis documentation
│ │ ├── results/
│ │ └── scripts/
├── graph_testing_legacy # python-based initial exploration of EpiGraphDB (not a part of the article results)
├── MRconf_poster.png
├── study_overview.png
└── query_results/
