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Add full ontology declaration to phenio-test.owl header #63

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caufieldjh opened this issue Mar 10, 2024 · 2 comments
Open

Add full ontology declaration to phenio-test.owl header #63

caufieldjh opened this issue Mar 10, 2024 · 2 comments
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enhancement New feature or request

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@caufieldjh
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...add an annotate to ensure a full declaration gets added.

Originally posted by @caufieldjh in geneontology/obographs#100 (comment)

phenio-test.owl doesn't get a full ontology declaration added to its header.
This isn't generally an issue until we try to transform it to obojson, at which point it isn't valid.
The declaration can be added with a ROBOT annotate command, at least to add IRIs.

@caufieldjh caufieldjh added the enhancement New feature or request label Mar 10, 2024
@matentzn
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You may be able to achieve this with --copy-ontology-annotations: https://robot.obolibrary.org/extract#extracting-ontology-annotations

@caufieldjh
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Oh wow, I didn't even notice that flag before. Thanks @matentzn - will try that first.

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