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rn6.yaml
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rn6.yaml
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name: foo
has:
CHR:10116-chr1p13:
id: CHR:10116-chr1p13
band_descriptor: p13
chromosome_name: chr1
build: rn6
name: 1p13 (Rat)
type:
text: chromosome_part
meaning: http://purl.obolibrary.org/obo/GO_0098687
taxon: NCBITaxon:10116
start: 0
end: 10704345
parent: CHR:10116-chr1p1
CHR:10116-chr1p1:
id: CHR:10116-chr1p1
band_descriptor: p1
chromosome_name: chr1
build: rn6
name: 1p1 (Rat)
type:
text: chromosome_part
meaning: http://purl.obolibrary.org/obo/GO_0098687
taxon: NCBITaxon:10116
start: 0
end: 40652454
children:
- CHR:10116-chr1p13
- CHR:10116-chr1p12
- CHR:10116-chr1p11
parent: CHR:10116-chr1p
CHR:10116-chr1p:
id: CHR:10116-chr1p
band_descriptor: p
chromosome_name: chr1
build: rn6
name: 1p (Rat)
type:
text: chromosome_part
meaning: http://purl.obolibrary.org/obo/GO_0098687
taxon: NCBITaxon:10116
start: 0
end: 40652454
children:
- CHR:10116-chr1p1
parent: CHR:10116-chr1
CHR:10116-chr1:
id: CHR:10116-chr1
band_descriptor: ''
chromosome_name: chr1
build: rn6
name: chromosome 1 (Rat)
type:
text: chromosome
meaning: http://purl.obolibrary.org/obo/GO_0005694
somal_type:
text: autosome
meaning: http://purl.obolibrary.org/obo/GO_0030849
cell_location:
text: nucleus
meaning: http://purl.obolibrary.org/obo/GO_0005634
taxon: NCBITaxon:10116
start: 0
end: 282763074
children:
- CHR:10116-chr1p
- CHR:10116-chr1q
exact_mappings:
- refseq:NC_005100.4
- insdc:CM000072.5
broad_synonyms:
- '1'
CHR:10116-chr1p12:
id: CHR:10116-chr1p12
band_descriptor: p12
chromosome_name: chr1
build: rn6
name: 1p12 (Rat)
type:
text: chromosome_part
meaning: http://purl.obolibrary.org/obo/GO_0098687
taxon: NCBITaxon:10116
start: 10704345
end: 25618263
parent: CHR:10116-chr1p1
CHR:10116-chr1p11:
id: CHR:10116-chr1p11
band_descriptor: p11
chromosome_name: chr1
build: rn6
name: 1p11 (Rat)
type:
text: chromosome_part
meaning: http://purl.obolibrary.org/obo/GO_0098687
taxon: NCBITaxon:10116
start: 25618263
end: 40652454
parent: CHR:10116-chr1p1
CHR:10116-chr1q11:
id: CHR:10116-chr1q11
band_descriptor: q11
chromosome_name: chr1
build: rn6
name: 1q11 (Rat)
type:
text: chromosome_part
meaning: http://purl.obolibrary.org/obo/GO_0098687
taxon: NCBITaxon:10116
start: 40652454
end: 51356799
parent: CHR:10116-chr1q1
CHR:10116-chr1q1:
id: CHR:10116-chr1q1
band_descriptor: q1
chromosome_name: chr1
build: rn6
name: 1q1 (Rat)
type:
text: chromosome_part
meaning: http://purl.obolibrary.org/obo/GO_0098687
taxon: NCBITaxon:10116
start: 40652454
end: 73607402
children:
- CHR:10116-chr1q11
- CHR:10116-chr1q12
parent: CHR:10116-chr1q
CHR:10116-chr1q:
id: CHR:10116-chr1q
band_descriptor: q
chromosome_name: chr1
build: rn6
name: 1q (Rat)
type:
text: chromosome_part
meaning: http://purl.obolibrary.org/obo/GO_0098687
taxon: NCBITaxon:10116
start: 40652454
end: 282763074
children:
- CHR:10116-chr1q1
- CHR:10116-chr1q2
- CHR:10116-chr1q3
- CHR:10116-chr1q4
- CHR:10116-chr1q5
parent: CHR:10116-chr1
CHR:10116-chr1q12:
id: CHR:10116-chr1q12
band_descriptor: q12
chromosome_name: chr1
build: rn6
name: 1q12 (Rat)
type:
text: chromosome_part
meaning: http://purl.obolibrary.org/obo/GO_0098687
taxon: NCBITaxon:10116
start: 51356799
end: 73607402
parent: CHR:10116-chr1q1
CHR:10116-chr1q21:
id: CHR:10116-chr1q21
band_descriptor: q21
chromosome_name: chr1
build: rn6
name: 1q21 (Rat)
type:
text: chromosome_part
meaning: http://purl.obolibrary.org/obo/GO_0098687
taxon: NCBITaxon:10116
start: 73607402
end: 95016091
parent: CHR:10116-chr1q2
CHR:10116-chr1q2:
id: CHR:10116-chr1q2
band_descriptor: q2
chromosome_name: chr1
build: rn6
name: 1q2 (Rat)
type:
text: chromosome_part
meaning: http://purl.obolibrary.org/obo/GO_0098687
taxon: NCBITaxon:10116
start: 73607402
end: 130617056
children:
- CHR:10116-chr1q21
- CHR:10116-chr1q22
parent: CHR:10116-chr1q
CHR:10116-chr1q22:
id: CHR:10116-chr1q22
band_descriptor: q22
chromosome_name: chr1
build: rn6
name: 1q22 (Rat)
type:
text: chromosome_part
meaning: http://purl.obolibrary.org/obo/GO_0098687
taxon: NCBITaxon:10116
start: 95016091
end: 130617056
parent: CHR:10116-chr1q2
CHR:10116-chr1q31:
id: CHR:10116-chr1q31
band_descriptor: q31
chromosome_name: chr1
build: rn6
name: 1q31 (Rat)
type:
text: chromosome_part
meaning: http://purl.obolibrary.org/obo/GO_0098687
taxon: NCBITaxon:10116
start: 130617056
end: 149018906
parent: CHR:10116-chr1q3
CHR:10116-chr1q3:
id: CHR:10116-chr1q3
band_descriptor: q3
chromosome_name: chr1
build: rn6
name: 1q3 (Rat)
type:
text: chromosome_part
meaning: http://purl.obolibrary.org/obo/GO_0098687
taxon: NCBITaxon:10116
start: 130617056
end: 201337893
children:
- CHR:10116-chr1q31
- CHR:10116-chr1q32
- CHR:10116-chr1q33
- CHR:10116-chr1q34
- CHR:10116-chr1q35
- CHR:10116-chr1q36
- CHR:10116-chr1q37
parent: CHR:10116-chr1q
CHR:10116-chr1q32:
id: CHR:10116-chr1q32
band_descriptor: q32
chromosome_name: chr1
build: rn6
name: 1q32 (Rat)
type:
text: chromosome_part
meaning: http://purl.obolibrary.org/obo/GO_0098687
taxon: NCBITaxon:10116
start: 149018906
end: 171269510
parent: CHR:10116-chr1q3
CHR:10116-chr1q33:
id: CHR:10116-chr1q33
band_descriptor: q33
chromosome_name: chr1
build: rn6
name: 1q33 (Rat)
type:
text: chromosome_part
meaning: http://purl.obolibrary.org/obo/GO_0098687
taxon: NCBITaxon:10116
start: 171269510
end: 179929204
parent: CHR:10116-chr1q3
CHR:10116-chr1q34:
id: CHR:10116-chr1q34
band_descriptor: q34
chromosome_name: chr1
build: rn6
name: 1q34 (Rat)
type:
text: chromosome_part
meaning: http://purl.obolibrary.org/obo/GO_0098687
taxon: NCBITaxon:10116
start: 179929204
end: 184138778
parent: CHR:10116-chr1q3
CHR:10116-chr1q35:
id: CHR:10116-chr1q35
band_descriptor: q35
chromosome_name: chr1
build: rn6
name: 1q35 (Rat)
type:
text: chromosome_part
meaning: http://purl.obolibrary.org/obo/GO_0098687
taxon: NCBITaxon:10116
start: 184138778
end: 189791634
parent: CHR:10116-chr1q3
CHR:10116-chr1q36:
id: CHR:10116-chr1q36
band_descriptor: q36
chromosome_name: chr1
build: rn6
name: 1q36 (Rat)
type:
text: chromosome_part
meaning: http://purl.obolibrary.org/obo/GO_0098687
taxon: NCBITaxon:10116
start: 189791634
end: 198331054
parent: CHR:10116-chr1q3
CHR:10116-chr1q37:
id: CHR:10116-chr1q37
band_descriptor: q37
chromosome_name: chr1
build: rn6
name: 1q37 (Rat)
type:
text: chromosome_part
meaning: http://purl.obolibrary.org/obo/GO_0098687
taxon: NCBITaxon:10116
start: 198331054
end: 201337893
parent: CHR:10116-chr1q3
CHR:10116-chr1q41:
id: CHR:10116-chr1q41
band_descriptor: q41
chromosome_name: chr1
build: rn6
name: 1q41 (Rat)
type:
text: chromosome_part
meaning: http://purl.obolibrary.org/obo/GO_0098687
taxon: NCBITaxon:10116
start: 201337893
end: 216251810
parent: CHR:10116-chr1q4
CHR:10116-chr1q4:
id: CHR:10116-chr1q4
band_descriptor: q4
chromosome_name: chr1
build: rn6
name: 1q4 (Rat)
type:
text: chromosome_part
meaning: http://purl.obolibrary.org/obo/GO_0098687
taxon: NCBITaxon:10116
start: 201337893
end: 235615849
children:
- CHR:10116-chr1q41
- CHR:10116-chr1q42
- CHR:10116-chr1q43
parent: CHR:10116-chr1q
CHR:10116-chr1q42:
id: CHR:10116-chr1q42
band_descriptor: q42
chromosome_name: chr1
build: rn6
name: 1q42 (Rat)
type:
text: chromosome_part
meaning: http://purl.obolibrary.org/obo/GO_0098687
taxon: NCBITaxon:10116
start: 216251810
end: 218897828
parent: CHR:10116-chr1q4
CHR:10116-chr1q43:
id: CHR:10116-chr1q43
band_descriptor: q43
chromosome_name: chr1
build: rn6
name: 1q43 (Rat)
type:
text: chromosome_part
meaning: http://purl.obolibrary.org/obo/GO_0098687
taxon: NCBITaxon:10116
start: 218897828
end: 235615849
parent: CHR:10116-chr1q4
CHR:10116-chr1q51:
id: CHR:10116-chr1q51
band_descriptor: q51
chromosome_name: chr1
build: rn6
name: 1q51 (Rat)
type:
text: chromosome_part
meaning: http://purl.obolibrary.org/obo/GO_0098687
taxon: NCBITaxon:10116
start: 235615849
end: 244155270
parent: CHR:10116-chr1q5
CHR:10116-chr1q5:
id: CHR:10116-chr1q5
band_descriptor: q5
chromosome_name: chr1
build: rn6
name: 1q5 (Rat)
type:
text: chromosome_part
meaning: http://purl.obolibrary.org/obo/GO_0098687
taxon: NCBITaxon:10116
start: 235615849
end: 282763074
children:
- CHR:10116-chr1q51
- CHR:10116-chr1q52
- CHR:10116-chr1q53
- CHR:10116-chr1q54
- CHR:10116-chr1q55
parent: CHR:10116-chr1q
CHR:10116-chr1q52:
id: CHR:10116-chr1q52
band_descriptor: q52
chromosome_name: chr1
build: rn6
name: 1q52 (Rat)
type:
text: chromosome_part
meaning: http://purl.obolibrary.org/obo/GO_0098687
taxon: NCBITaxon:10116
start: 244155270
end: 252694691
parent: CHR:10116-chr1q5
CHR:10116-chr1q53:
id: CHR:10116-chr1q53
band_descriptor: q53
chromosome_name: chr1
build: rn6
name: 1q53 (Rat)
type:
text: chromosome_part
meaning: http://purl.obolibrary.org/obo/GO_0098687
taxon: NCBITaxon:10116
start: 252694691
end: 259189461
parent: CHR:10116-chr1q5
CHR:10116-chr1q54:
id: CHR:10116-chr1q54
band_descriptor: q54
chromosome_name: chr1
build: rn6
name: 1q54 (Rat)
type:
text: chromosome_part
meaning: http://purl.obolibrary.org/obo/GO_0098687
taxon: NCBITaxon:10116
start: 259189461
end: 267728882
parent: CHR:10116-chr1q5
CHR:10116-chr1q55:
id: CHR:10116-chr1q55
band_descriptor: q55
chromosome_name: chr1
build: rn6
name: 1q55 (Rat)
type:
text: chromosome_part
meaning: http://purl.obolibrary.org/obo/GO_0098687
taxon: NCBITaxon:10116
start: 267728882
end: 282763074
parent: CHR:10116-chr1q5
CHR:10116-chr10q11:
id: CHR:10116-chr10q11
band_descriptor: q11
chromosome_name: chr10
build: rn6
name: 10q11 (Rat)
type:
text: chromosome_part
meaning: http://purl.obolibrary.org/obo/GO_0098687
taxon: NCBITaxon:10116
start: 0
end: 6362541
parent: CHR:10116-chr10q1
CHR:10116-chr10q1:
id: CHR:10116-chr10q1
band_descriptor: q1
chromosome_name: chr10
build: rn6
name: 10q1 (Rat)
type:
text: chromosome_part
meaning: http://purl.obolibrary.org/obo/GO_0098687
taxon: NCBITaxon:10116
start: 0
end: 26684687
children:
- CHR:10116-chr10q11
- CHR:10116-chr10q12
parent: CHR:10116-chr10q
CHR:10116-chr10q:
id: CHR:10116-chr10q
band_descriptor: q
chromosome_name: chr10
build: rn6
name: 10q (Rat)
type:
text: chromosome_part
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