diff --git a/.travis.yml b/.travis.yml index a955bb9..af52f8c 100644 --- a/.travis.yml +++ b/.travis.yml @@ -12,7 +12,8 @@ cache: directories: - "~/.pnpm-store" before_install: - - curl -f https://get.pnpm.io/v6.16.js | node - add --global pnpm@7 + - corepack enable + - corepack prepare pnpm@latest-8 --activate - pnpm config set store-dir ~/.pnpm-store install: - pnpm install diff --git a/package.json b/package.json index 7ec5c35..08ad992 100644 --- a/package.json +++ b/package.json @@ -1,6 +1,6 @@ { "name": "@molgenis/vip-report-api", - "version": "4.4.0", + "version": "4.4.1", "description": "TypeScript Report API for Variant Call Format (VCF) Report Templates", "scripts": { "build": "tsc --build", @@ -30,19 +30,19 @@ "access": "public" }, "devDependencies": { - "@types/node": "^18.15.11", - "@typescript-eslint/eslint-plugin": "^5.58.0", - "@typescript-eslint/parser": "^5.58.0", - "@vitest/coverage-c8": "^0.30.1", - "eslint": "^8.38.0", + "@types/node": "^20.4.0", + "@typescript-eslint/eslint-plugin": "^5.61.0", + "@typescript-eslint/parser": "^5.61.0", + "@vitest/coverage-v8": "^0.32.4", + "eslint": "^8.44.0", "eslint-config-prettier": "^8.8.0", "eslint-plugin-prettier": "^4.2.1", "husky": "^8.0.3", - "prettier": "^2.8.7", - "typescript": "^5.0.4", - "vitest": "^0.30.1" + "prettier": "^2.8.8", + "typescript": "^5.1.6", + "vitest": "^0.32.4" }, "dependencies": { - "@molgenis/vip-report-vcf": "^1.4.0" + "@molgenis/vip-report-vcf": "^1.4.1" } } diff --git a/pnpm-lock.yaml b/pnpm-lock.yaml index aa2bbd3..c6b1fa2 100644 --- a/pnpm-lock.yaml +++ b/pnpm-lock.yaml @@ -1,53 +1,70 @@ lockfileVersion: '6.0' +settings: + autoInstallPeers: true + excludeLinksFromLockfile: false + dependencies: '@molgenis/vip-report-vcf': - specifier: ^1.4.0 - version: 1.4.0 + specifier: ^1.4.1 + version: 1.4.1 devDependencies: '@types/node': - specifier: ^18.15.11 - version: 18.15.11 + specifier: ^20.4.0 + version: 20.4.0 '@typescript-eslint/eslint-plugin': - specifier: ^5.58.0 - version: 5.58.0(@typescript-eslint/parser@5.58.0)(eslint@8.38.0)(typescript@5.0.4) + specifier: ^5.61.0 + version: 5.61.0(@typescript-eslint/parser@5.61.0)(eslint@8.44.0)(typescript@5.1.6) '@typescript-eslint/parser': - specifier: ^5.58.0 - version: 5.58.0(eslint@8.38.0)(typescript@5.0.4) - '@vitest/coverage-c8': - specifier: ^0.30.1 - version: 0.30.1(vitest@0.30.1) + specifier: ^5.61.0 + version: 5.61.0(eslint@8.44.0)(typescript@5.1.6) + '@vitest/coverage-v8': + specifier: ^0.32.4 + version: 0.32.4(vitest@0.32.4) eslint: - specifier: ^8.38.0 - version: 8.38.0 + specifier: ^8.44.0 + version: 8.44.0 eslint-config-prettier: specifier: ^8.8.0 - version: 8.8.0(eslint@8.38.0) + version: 8.8.0(eslint@8.44.0) eslint-plugin-prettier: specifier: ^4.2.1 - version: 4.2.1(eslint-config-prettier@8.8.0)(eslint@8.38.0)(prettier@2.8.7) + version: 4.2.1(eslint-config-prettier@8.8.0)(eslint@8.44.0)(prettier@2.8.8) husky: specifier: ^8.0.3 version: 8.0.3 prettier: - specifier: ^2.8.7 - version: 2.8.7 + specifier: ^2.8.8 + version: 2.8.8 typescript: - specifier: ^5.0.4 - version: 5.0.4 + specifier: ^5.1.6 + version: 5.1.6 vitest: - specifier: ^0.30.1 - version: 0.30.1 + specifier: ^0.32.4 + version: 0.32.4 packages: + /@aashutoshrathi/word-wrap@1.2.6: + resolution: {integrity: sha512-1Yjs2SvM8TflER/OD3cOjhWWOZb58A2t7wpE2S9XfBYTiIl+XFhQG2bjy4Pu1I+EAlCNUzRDYDdFwFYUKvXcIA==} + engines: {node: '>=0.10.0'} + dev: true + + /@ampproject/remapping@2.2.1: + resolution: {integrity: sha512-lFMjJTrFL3j7L9yBxwYfCq2k6qqwHyzuUl/XBnif78PWTJYyL/dfowQHWE3sp6U6ZzqWiiIZnpTMO96zhkjwtg==} + engines: {node: '>=6.0.0'} + dependencies: + '@jridgewell/gen-mapping': 0.3.3 + '@jridgewell/trace-mapping': 0.3.18 + dev: true + /@bcoe/v8-coverage@0.2.3: resolution: {integrity: sha512-0hYQ8SB4Db5zvZB4axdMHGwEaQjkZzFjQiN9LVYvIFB2nSUHW9tYpxWriPrWDASIxiaXax83REcLxuSdnGPZtw==} dev: true - 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/@esbuild/linux-ia32@0.17.16: - resolution: {integrity: sha512-9ZBjlkdaVYxPNO8a7OmzDbOH9FMQ1a58j7Xb21UfRU29KcEEU3VTHk+Cvrft/BNv0gpWJMiiZ/f4w0TqSP0gLA==} + /@esbuild/linux-ia32@0.18.11: + resolution: {integrity: sha512-S3hkIF6KUqRh9n1Q0dSyYcWmcVa9Cg+mSoZEfFuzoYXXsk6196qndrM+ZiHNwpZKi3XOXpShZZ+9dfN5ykqjjw==} engines: {node: '>=12'} cpu: [ia32] os: [linux] @@ -136,8 +153,8 @@ packages: dev: true optional: true - /@esbuild/linux-loong64@0.17.16: - resolution: {integrity: sha512-TIZTRojVBBzdgChY3UOG7BlPhqJz08AL7jdgeeu+kiObWMFzGnQD7BgBBkWRwOtKR1i2TNlO7YK6m4zxVjjPRQ==} + /@esbuild/linux-loong64@0.18.11: + resolution: {integrity: sha512-MRESANOoObQINBA+RMZW+Z0TJWpibtE7cPFnahzyQHDCA9X9LOmGh68MVimZlM9J8n5Ia8lU773te6O3ILW8kw==} engines: {node: '>=12'} cpu: [loong64] os: [linux] @@ -145,8 +162,8 @@ packages: dev: true optional: true - /@esbuild/linux-mips64el@0.17.16: - resolution: {integrity: sha512-UPeRuFKCCJYpBbIdczKyHLAIU31GEm0dZl1eMrdYeXDH+SJZh/i+2cAmD3A1Wip9pIc5Sc6Kc5cFUrPXtR0XHA==} + /@esbuild/linux-mips64el@0.18.11: + resolution: {integrity: sha512-qVyPIZrXNMOLYegtD1u8EBccCrBVshxMrn5MkuFc3mEVsw7CCQHaqZ4jm9hbn4gWY95XFnb7i4SsT3eflxZsUg==} engines: {node: '>=12'} cpu: [mips64el] os: [linux] @@ -154,8 +171,8 @@ packages: dev: true optional: true - 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/vite-node@0.30.1(@types/node@18.15.11): - resolution: {integrity: sha512-vTikpU/J7e6LU/8iM3dzBo8ZhEiKZEKRznEMm+mJh95XhWaPrJQraT/QsT2NWmuEf+zgAoMe64PKT7hfZ1Njmg==} + /vite-node@0.32.4(@types/node@20.4.0): + resolution: {integrity: sha512-L2gIw+dCxO0LK14QnUMoqSYpa9XRGnTTTDjW2h19Mr+GR0EFj4vx52W41gFXfMLqpA00eK4ZjOVYo1Xk//LFEw==} engines: {node: '>=v14.18.0'} hasBin: true dependencies: cac: 6.7.14 debug: 4.3.4 - mlly: 1.2.0 - pathe: 1.1.0 + mlly: 1.4.0 + pathe: 1.1.1 picocolors: 1.0.0 - vite: 4.2.1(@types/node@18.15.11) + vite: 4.4.0(@types/node@20.4.0) transitivePeerDependencies: - '@types/node' - less + - lightningcss - sass - stylus - sugarss @@ -1758,13 +1668,14 @@ packages: - terser dev: true - /vite@4.2.1(@types/node@18.15.11): - resolution: {integrity: sha512-7MKhqdy0ISo4wnvwtqZkjke6XN4taqQ2TBaTccLIpOKv7Vp2h4Y+NpmWCnGDeSvvn45KxvWgGyb0MkHvY1vgbg==} + /vite@4.4.0(@types/node@20.4.0): + resolution: {integrity: sha512-Wf+DCEjuM8aGavEYiF77hnbxEZ+0+/jC9nABR46sh5Xi+GYeSvkeEFRiVuI3x+tPjxgZeS91h1jTAQTPFgePpA==} engines: {node: ^14.18.0 || >=16.0.0} hasBin: true peerDependencies: '@types/node': '>= 14' less: '*' + lightningcss: ^1.21.0 sass: '*' stylus: '*' sugarss: '*' @@ -1774,6 +1685,8 @@ packages: optional: true less: optional: true + lightningcss: + optional: true sass: optional: true stylus: @@ -1783,17 +1696,16 @@ packages: terser: optional: true dependencies: - '@types/node': 18.15.11 - esbuild: 0.17.16 - postcss: 8.4.21 - resolve: 1.22.2 - rollup: 3.20.2 + '@types/node': 20.4.0 + esbuild: 0.18.11 + postcss: 8.4.24 + rollup: 3.26.1 optionalDependencies: fsevents: 2.3.2 dev: true - /vitest@0.30.1: - resolution: {integrity: sha512-y35WTrSTlTxfMLttgQk4rHcaDkbHQwDP++SNwPb+7H8yb13Q3cu2EixrtHzF27iZ8v0XCciSsLg00RkPAzB/aA==} + /vitest@0.32.4: + resolution: {integrity: sha512-3czFm8RnrsWwIzVDu/Ca48Y/M+qh3vOnF16czJm98Q/AN1y3B6PBsyV8Re91Ty5s7txKNjEhpgtGPcfdbh2MZg==} engines: {node: '>=v14.18.0'} hasBin: true peerDependencies: @@ -1823,34 +1735,33 @@ packages: webdriverio: optional: true dependencies: - '@types/chai': 4.3.4 + '@types/chai': 4.3.5 '@types/chai-subset': 1.3.3 - '@types/node': 18.15.11 - '@vitest/expect': 0.30.1 - '@vitest/runner': 0.30.1 - '@vitest/snapshot': 0.30.1 - '@vitest/spy': 0.30.1 - '@vitest/utils': 0.30.1 - acorn: 8.8.2 + '@types/node': 20.4.0 + '@vitest/expect': 0.32.4 + '@vitest/runner': 0.32.4 + '@vitest/snapshot': 0.32.4 + '@vitest/spy': 0.32.4 + '@vitest/utils': 0.32.4 + acorn: 8.10.0 acorn-walk: 8.2.0 cac: 6.7.14 chai: 4.3.7 - concordance: 5.0.4 debug: 4.3.4 local-pkg: 0.4.3 - magic-string: 0.30.0 - pathe: 1.1.0 + magic-string: 0.30.1 + pathe: 1.1.1 picocolors: 1.0.0 - source-map: 0.6.1 - std-env: 3.3.2 + std-env: 3.3.3 strip-literal: 1.0.1 - tinybench: 2.4.0 - tinypool: 0.4.0 - vite: 4.2.1(@types/node@18.15.11) - vite-node: 0.30.1(@types/node@18.15.11) + tinybench: 2.5.0 + tinypool: 0.5.0 + vite: 4.4.0(@types/node@20.4.0) + vite-node: 0.32.4(@types/node@20.4.0) why-is-node-running: 2.2.2 transitivePeerDependencies: - less + - lightningcss - sass - stylus - sugarss @@ -1858,11 +1769,6 @@ packages: - terser dev: true - /well-known-symbols@2.0.0: - resolution: {integrity: sha512-ZMjC3ho+KXo0BfJb7JgtQ5IBuvnShdlACNkKkdsqBmYw3bPAaJfPeYUo6tLUaT5tG/Gkh7xkpBhKRQ9e7pyg9Q==} - engines: {node: '>=6'} - dev: true - /which@2.0.2: resolution: {integrity: sha512-BLI3Tl1TW3Pvl70l3yq3Y64i+awpwXqsGBYWkkqMtnbXgrMD+yj7rhW0kuEDxzJaYXGjEW5ogapKNMEKNMjibA==} engines: {node: '>= 8'} @@ -1880,51 +1786,14 @@ packages: stackback: 0.0.2 dev: true - /word-wrap@1.2.3: - resolution: {integrity: sha512-Hz/mrNwitNRh/HUAtM/VT/5VH+ygD6DV7mYKZAtHOrbs8U7lvPS6xf7EJKMF0uW1KJCl0H701g3ZGus+muE5vQ==} - engines: {node: '>=0.10.0'} - dev: true - - /wrap-ansi@7.0.0: - resolution: {integrity: sha512-YVGIj2kamLSTxw6NsZjoBxfSwsn0ycdesmc4p+Q21c5zPuZ1pl+NfxVdxPtdHvmNVOQ6XSYG4AUtyt/Fi7D16Q==} - engines: {node: '>=10'} - dependencies: - ansi-styles: 4.3.0 - string-width: 4.2.3 - strip-ansi: 6.0.1 - dev: true - /wrappy@1.0.2: resolution: {integrity: sha512-l4Sp/DRseor9wL6EvV2+TuQn63dMkPjZ/sp9XkghTEbV9KlPS1xUsZ3u7/IQO4wxtcFB4bgpQPRcR3QCvezPcQ==} dev: true - /y18n@5.0.8: - resolution: {integrity: sha512-0pfFzegeDWJHJIAmTLRP2DwHjdF5s7jo9tuztdQxAhINCdvS+3nGINqPd00AphqJR/0LhANUS6/+7SCb98YOfA==} - engines: {node: '>=10'} - dev: true - /yallist@4.0.0: resolution: {integrity: sha512-3wdGidZyq5PB084XLES5TpOSRA3wjXAlIWMhum2kRcv/41Sn2emQ0dycQW4uZXLejwKvg6EsvbdlVL+FYEct7A==} dev: true - /yargs-parser@20.2.9: - resolution: {integrity: sha512-y11nGElTIV+CT3Zv9t7VKl+Q3hTQoT9a1Qzezhhl6Rp21gJ/IVTW7Z3y9EWXhuUBC2Shnf+DX0antecpAwSP8w==} - engines: {node: '>=10'} - dev: true - - /yargs@16.2.0: - resolution: {integrity: sha512-D1mvvtDG0L5ft/jGWkLpG1+m0eQxOfaBvTNELraWj22wSVUMWxZUvYgJYcKh6jGGIkJFhH4IZPQhR4TKpc8mBw==} - engines: {node: '>=10'} - dependencies: - cliui: 7.0.4 - escalade: 3.1.1 - get-caller-file: 2.0.5 - require-directory: 2.1.1 - string-width: 4.2.3 - y18n: 5.0.8 - yargs-parser: 20.2.9 - dev: true - /yocto-queue@0.1.0: resolution: {integrity: sha512-rVksvsnNCdJ/ohGc6xgPwyN8eheCxsiLM8mxuE/t/mOVqJewPuO1miLpTHQiRgTKCLexL4MeAFVagts7HmNZ2Q==} engines: {node: '>=10'} diff --git a/vitest.config.ts b/vitest.config.ts index d9e837e..c5decc5 100644 --- a/vitest.config.ts +++ b/vitest.config.ts @@ -3,6 +3,7 @@ import { defineConfig } from "vitest/config"; export default defineConfig({ test: { coverage: { + provider: 'v8', all: true, lines: 65, functions: 65,