dxapp.json

{
  "name": "upload_multiqc_v1.4.0",
  "title": "Upload Multiqc v1.4.0",
  "summary": "Uploads multiqc file to the Viapath Genomics server",
  "tags": [
    "QC"
  ],
  "properties": {
    "github release": "v1.4.0"
  },
  "dxapi": "1.0.0",
  "inputSpec": [
    {
      "name": "multiqc_html",
      "label": "Multiqc HTML",
      "help": "A multiqc html output file",
      "class": "file",
      "optional": false
    },
    {
      "name": "multiqc_data_input",
      "label": "Multiqc data files",
      "help": "Data files output by multiqc ",
      "class": "array:file",
      "optional": true
    },
    {
      "name": "upload_data_files",
      "label": "upload multiqc data files to server",
      "help": "upload multiqc data files to server",
      "class": "boolean",
      "optional": false,
      "default": true
    }
  ],
  "outputSpec": [
    {
      "name": "upload_multiqc",
      "label": "MultiQC server index.html files",
      "help": "Upload MultiQC app outputs",
      "class": "array:file"
    }
  ],
  "runSpec": {
    "interpreter": "bash",
    "distribution": "Ubuntu",
    "release": "16.04",
    "version": "0",
    "file": "src/code.sh"
  },
  "access": {
    "network": [
      "*"
    ]
  },
  "ignoreReuse": false,
  "regionalOptions": {
    "aws:us-east-1": {
      "systemRequirements": {
        "main": {
          "instanceType": "mem1_ssd1_x2"
        }
      }
    }
  }
}