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pipelines-config.yaml
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pipelines-config.yaml
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# This is the configuration file for the data ingestion pipeline script for the province of Québec
# modelEAU lab
colors:
"0":
french: "Pas de données"
english: "No Data"
color: "#ececec"
"1":
french: "Très faible"
english: "Very Low"
color: "#6da06f"
"2":
french: "Faible"
english: "Low"
color: "#b6e9d1"
"3":
french: "Moyennement élevé"
english: "Somewhat high"
color: "#ffbb43"
"4":
french: "Élevé"
english: "High"
color: "#ff8652"
"5":
french: "Très élevé"
english: "Very high"
color: "#c13525"
lod: 0.5
default_start_date: "2021-01-01"
lvl_start_date: "2020-10-01"
logo_path: "/Users/jeandavidt/Library/CloudStorage/OneDrive-UniversitéLaval/Université/Doctorat/COVID/Latest Data/Input/Logos/centreau-covid_logos.png"
data_folder: "/Users/jeandavidt/Library/CloudStorage/OneDrive-UniversitéLaval/Université/Doctorat/COVID/Latest Data/Input"
csv_folder: "/Users/jeandavidt/Library/CloudStorage/OneDrive-UniversitéLaval/Université/Doctorat/COVID/Latest Data/odm_csv"
parquet_folder: "/Users/jeandavidt/Library/CloudStorage/OneDrive-UniversitéLaval/Université/Doctorat/COVID/Latest Data/odm_parquet"
polygon_output_dir: "/Users/jeandavidt/Library/CloudStorage/OneDrive-UniversitéLaval/Université/Doctorat/COVID/Website geo"
site_output_dir: "/Users/jeandavidt/Library/CloudStorage/OneDrive-UniversitéLaval/Université/Doctorat/COVID/Website geo"
plot_output_dir: "/Users/jeandavidt/Library/CloudStorage/OneDrive-UniversitéLaval/Université/Doctorat/COVID/Website figures"
city_output_dir: "/Users/jeandavidt/Library/CloudStorage/OneDrive-UniversitéLaval/Université/Doctorat/COVID/Latest Data/wide tables"
static_data: "Ongoing/CentrEAU-COVID_Static_Data.xlsx"
inspq_data: ""
inspq_vaccine_data: ""
qc_lab_data: "Ongoing/COVIDProject_Lab Measurements.xlsx"
qc_sheet_name: "Lab analyses"
qc_lab: "modeleau_lab"
qc_geo_path1: "qc1-poly.txt"
qc_geo_path2: "qc2-poly.txt"
qc_city_sensor_folder: "2021/Qc_sensors"
qc_city_plant_folder: "2021/Qc_plant"
qc_city_rain_folder: "2021/Qc_rain"
qc_virus_data: "2021/CentrEau-COVID_Resultats_Quebec.xlsx"
qc_virus_sheet_name: "QC Data Daily Samples (McGill)"
qc_quality_sheet_name: "QC_Compil_STEP (int)"
qc_virus_lab: "frigon_lab"
ul_virus_data: "2021/CentrEau-COVID_Resultats_McGill&Laval_Student_Residences.xlsx"
ul_virus_sheet_name: "Data Daily Samples (McGill)"
ul_virus_lab: "frigon_lab"
mtl_lab_data: "2021/CentrEau-COVID_Resultats_Montreal_final.xlsx"
mtl_poly_sheet_name: "Mtl Data Daily Samples (Poly)"
mtl_mcgill_sheet_name: "Mtl Data Daily Samples (McGill)"
mtl_quality_sheet_name: "MTL_Compil_STEP (int)"
mcgill_virus_lab: "frigon_lab"
poly_virus_lab: "dorner_lab"
mtl_city_data: "2021/cities/CentrEau-COVID_Données-de-sites-VILLE MONTRÉAL.xlsx"
mtl_city_map: "cities_2021_mtl_map.csv"
bsl_lab_data: "2021/CentrEau-COVID_Resultats_BSL_final.xlsx"
bsl_sheet_name: "BSL Data Daily Samples (UQAR)"
bsl_virus_lab: "bsl_lab"
bsl_cities:
- "stak"
- "trpis"
- "mtne"
- "riki"
- "rdl"
bsl_quality_sheet_name: "BSL_Compil_STEP (int)"
bsl_city_data: "2021/cities/CentrEau-COVID_Données-de-sites-VILLE-BSL.xlsx"
lvl_lab_data: "2021/CentrEau-COVID_Resultats_Laval_final.xlsx"
lvl_sheet_name: "LVL_Data Daily Samples (Poly)"
lvl_virus_lab: "dorner_lab"
lvl_quality_sheet_name: "LVL_Compil_ALL (int)"
lvl_city_data: "2021/cities/CentrEau-COVID_Données-de-sites-VILLE LAVAL.xlsx"
poly_name: "polygons.geojson"
polys_to_extract:
- "swrCat"
site_name: "sites.geojson"
plot_langs:
- "french"
- "english"
health_polygons:
qc_01: prov_qc_hlthreg_capitale_nationale
qc_02: prov_qc_hlthreg_capitale_nationale
qc_03.1: prov_qc_hlthreg_capitale_nationale
qc_03.2: prov_qc_hlthreg_capitale_nationale
qc_03.3: prov_qc_hlthreg_capitale_nationale
qc_04: prov_qc_hlthreg_capitale_nationale
qc_05: prov_qc_hlthreg_capitale_nationale
qc_06.1: prov_qc_hlthreg_capitale_nationale
qc_06.2: prov_qc_hlthreg_capitale_nationale
qc_07.1: prov_qc_hlthreg_capitale_nationale
qc_07.2: prov_qc_hlthreg_capitale_nationale
qc_08: prov_qc_hlthreg_capitale_nationale
qc_09: prov_qc_hlthreg_capitale_nationale
qc_10: prov_qc_hlthreg_capitale_nationale
qc_11: prov_qc_hlthreg_capitale_nationale
qc_12: prov_qc_hlthreg_capitale_nationale
qc_13: prov_qc_hlthreg_capitale_nationale
qc_14: prov_qc_hlthreg_capitale_nationale
qc_15: prov_qc_hlthreg_capitale_nationale
qc_16.1: prov_qc_hlthreg_capitale_nationale
qc_16.2: prov_qc_hlthreg_capitale_nationale
qc_16.3: prov_qc_hlthreg_capitale_nationale
qc_16.4: prov_qc_hlthreg_capitale_nationale
mtl_01: prov_qc_hlthreg_montreal
mtl_02: prov_qc_hlthreg_montreal
mtl_05: prov_qc_hlthreg_montreal
mtl_08.1: prov_qc_hlthreg_montreal
mtl_08.2: prov_qc_hlthreg_montreal
mtl_11: prov_qc_hlthreg_montreal
mtl_12: prov_qc_hlthreg_montreal
mtl_16: prov_qc_hlthreg_montreal
riki_01: prov_qc_hlthreg_bas_saint_laurent
rdl_01: prov_qc_hlthreg_bas_saint_laurent
stak_01: prov_qc_hlthreg_bas_saint_laurent
stak_02: prov_qc_hlthreg_bas_saint_laurent
trpis_01: prov_qc_hlthreg_bas_saint_laurent
mtne_01: prov_qc_hlthreg_bas_saint_laurent
lvl_01: prov_qc_hlthreg_laval
lvl_02: prov_qc_hlthreg_laval
lvl_03: prov_qc_hlthreg_laval
lvl_04: prov_qc_hlthreg_laval
lvl_05: prov_qc_hlthreg_laval
gtn_01: prov_qc_hlthreg_outaouais