From d57a3d649050aa4cdcdea86e7f5b8039df8d2307 Mon Sep 17 00:00:00 2001 From: Daniel McCloy Date: Wed, 3 Aug 2022 10:48:14 -0500 Subject: [PATCH] prep for release 1.1 (#10994) * update doc/cited.rst * sort .mailmap * update mailmap * sort names.inc * update names.inc * add authors to changelog * update version name in changelog * update versions JSON, SECURITY.md, and mne/_version.py * bump maint version in circle configs * update codemeta and citation.cff * tmp fix azp * fix mailmap cruft * revert AZP config change * bump date * Update azure-pipelines.yml --- .circleci/config.yml | 2 +- .mailmap | 480 ++++++++++---------- CITATION.cff | 655 ++++++++++++++++++++++++++++ MANIFEST.in | 1 + SECURITY.md | 6 +- codemeta.json | 416 +++++++++++------- doc/_static/versions.json | 8 +- doc/changes/{latest.inc => 1.1.inc} | 59 ++- doc/changes/names.inc | 478 ++++++++++---------- doc/cited.rst | 6 +- doc/whats_new.rst | 2 +- mne/_version.py | 2 +- tools/circleci_download.sh | 2 +- 13 files changed, 1487 insertions(+), 630 deletions(-) create mode 100644 CITATION.cff rename doc/changes/{latest.inc => 1.1.inc} (95%) diff --git a/.circleci/config.yml b/.circleci/config.yml index b40e56dc33a..189a0a55679 100644 --- a/.circleci/config.yml +++ b/.circleci/config.yml @@ -508,7 +508,7 @@ workflows: branches: only: - main - - maint/1.0 + - maint/1.1 main: jobs: diff --git a/.mailmap b/.mailmap index fd07f1ddda2..c4c26e1ff67 100644 --- a/.mailmap +++ b/.mailmap @@ -1,262 +1,280 @@ -Alexandre Gramfort Alexandre Gramfort -Alexandre Gramfort Alexandre Gramfort +Adam Li Adam Li +Adam Li Adam Li +Alan Leggitt leggitta +Alessandro Tonin Lychfindel <58313635+Lychfindel@users.noreply.github.com> +Alex Rockhill Alex +Alex Rockhill Alex +Alex Rockhill Alex Rockhill +Alex Rockhill Alex Rockhill +Alexander Rudiuk Alexander Rudiuk +Alexandre Barachant alexandre barachant Alexandre Gramfort Alexandre Gramfort +Alexandre Gramfort Alexandre Gramfort Alexandre Gramfort Alexandre Gramfort +Alexandre Gramfort Alexandre Gramfort Alexandre Gramfort Alexandre Gramfort -Martin Luessi mluessi@nmr.mgh.harvard.edu -Martin Luessi martin -Martin Luessi martin -Matti Hämäläinen Matti Hämäläinen -Matti Hämäläinen Matti Hamalainen -Matti Hämäläinen Matti Hamalainen -Matti Hämäläinen mshamalainen -Christian Brodbeck christianmbrodbeck -Christian Brodbeck Christian Brodbeck -Louis Thibault = -Louis Thibault Louis Thibault -Eric Larson Eric Larson -Eric Larson Eric89GXL -Eric Larson Eric Larson -Eric Larson Eric89GXL -Denis A. Engemann dengemann -Denis A. Engemann denis -Denis A. Engemann dengemann -Denis A. Engemann Denis Engemann -Denis A. Engemann Denis A. Engemann -Denis A. Engemann Denis Engemann -Denis A. Engemann Denis A. Engemann -Denis A. Engemann Denis A. Engemann -Daniel Strohmeier joewalter -Daniel Strohmeier Daniel Strohmeier -Dan G. Wakeman Daniel G. Wakeman -Dan G. Wakeman dgwakeman -Dan G. Wakeman dgwakeman -Dan G. Wakeman Daniel Wakeman -Teon Brooks -Teon Brooks Teon -Teon Brooks Teon Brooks -Teon Brooks -Romain Trachel Romain Trachel -Romain Trachel Romain Trachel -Romain Trachel trachelr -Roman Goj +Ana Radanovic anaradanovic <79697247+anaradanovic@users.noreply.github.com> Andrew Dykstra -Yousra Bekhti Yoursa BEKHTI -Yousra Bekhti Yoursa BEKHTI -Yousra Bekhti yousrabk -Alan Leggitt leggitta -Praveen Sripad prav -Praveen Sripad prav -Martin Billinger kazemakase -Martin Billinger Martin Billinger -Martin Billinger Martin -Martin Billinger mbillingr -Martin van Harmelen <1544429+MPvHarmelen@users.noreply.github.com> Martin <1544429+MPvHarmelen@users.noreply.github.com> -Mainak Jas Mainak -Mainak Jas Mainak Jas -Mainak Jas mainakjas -Mainak Jas Mainak Jas -Mainak Jas Mainak Jas -Marmaduke Woodman maedoc +Anna Padee <44297909+apadee@users.noreply.github.com> apadee <44297909+apadee@users.noreply.github.com> +Anne-Sophie Dubarry annesodub +Archit Singhal <43236121+architsinghal-mriirs@users.noreply.github.com> archit singhal +Ashley Drew <33734402+ashdrew@users.noreply.github.com> ashdrew <33734402+ashdrew@users.noreply.github.com> +Asish Panda kaichogami +Basile Pinsard Brad Buran Brad Buran +Britta Westner britta-wstnr +Burkhard Maess Burkhard Maess +Carina Forster Carina +Carlos de la Torre carlos +Catalina María Galván <79813952+catalinamagalvan@users.noreply.github.com> Catalina Magalvan <79813952+catalinamagalvan@users.noreply.github.com> +Catalina María Galván <79813952+catalinamagalvan@users.noreply.github.com> catalinamagalvan <79813952+catalinamagalvan@users.noreply.github.com> Cathy Nangini CN -Olaf Hauk Olaf Hauk -Olaf Hauk olafhauk -Jean-Remi King kingjr -Jean-Remi King UMR9752 -Jean-Remi King UMR9752 -Jean-Remi King kingjr -Jean-Remi King Jean-Rémi KING -Jean-Remi King kingjr -Roan LaPlante aestrivex -Mark Wronkiewicz wronk -Basile Pinsard +Chris Holdgraf Chris Holdgraf +Chris Holdgraf Christopher Holdgraf +Christian Brodbeck Christian Brodbeck +Christian Brodbeck christianmbrodbeck +Christian Mista cmista <79416030+cmista@users.noreply.github.com> +Christina Zhao ChristinaZhao +Christoph Dinh Christoph Dinh +Christopher J. Bailey Chris Bailey +Claire Braboszcz claire-braboszcz Clément Moutard -Manoj Kumar MechCoder -Ingoo Lee dlsrnsi -Jona Sassenhagen Jona Sassenhagen -Jona Sassenhagen jona-sassenhagen -Jona Sassenhagen jona-sassenhagen@ -Jona Sassenhagen jona-sassenhagen -Jona Sassenhagen jona -Jona Sassenhagen sassenha -Jona Sassenhagen jona.sassenhagen@gmail.com -Yousra Bekhti Yousra BEKHTI -Ross Maddox unknown -Ross Maddox Ross Maddox -Ross Maddox rkmaddox -Jaakko Leppakangas Jaakko Leppakangas -Jaakko Leppakangas jaeilepp -Jaakko Leppakangas jaeilepp -Jair Montoya jmontoyam -Natalie Klein natalieklein +Cora Kim <41998428+kimcoco@users.noreply.github.com> kimcoco <41998428+kimcoco@users.noreply.github.com> +Cristóbal Moënne-Loccoz Cristóbal +Dan G. Wakeman Daniel G. Wakeman +Dan G. Wakeman Daniel Wakeman +Dan G. Wakeman dgwakeman +Dan G. Wakeman dgwakeman Daniel McCloy Daniel McCloy Daniel McCloy drammock +Daniel Strohmeier Daniel Strohmeier +Daniel Strohmeier joewalter +David Julien David JULIEN +David Sabbagh DavidSabbagh <33925146+DavidSabbagh@users.noreply.github.com> +Demetres Kostas <40433000+kostasde@users.noreply.github.com> kostasde <40433000+kostasde@users.noreply.github.com> +Denis A. Engemann dengemann +Denis A. Engemann dengemann +Denis A. Engemann denis +Denis A. Engemann Denis A. Engemann +Denis A. Engemann Denis A. Engemann +Denis A. Engemann Denis A. Engemann +Denis A. Engemann Denis Engemann +Denis A. Engemann Denis Engemann +Dmitrii Altukhov dmalt +Dominik Krzemiński dokato +Dominik Welke dominikwelke <33089761+dominikwelke@users.noreply.github.com> +Eberhard Eich ebeich +Eduard Ort Eduard Ort +Eduard Ort eort +Eduard Ort examplename +Ellen Lau ellenlau +Emily Stephen Emily P. Stephen +Emily Stephen emilyps14 +Enrico Varano <69973551+enricovara@users.noreply.github.com> enricovara <69973551+enricovara@users.noreply.github.com> +Eric Larson Eric Larson +Eric Larson Eric Larson +Eric Larson Eric Larson +Eric Larson Eric89GXL +Eric Larson Eric89GXL +Erica Peterson nordme <38704848+nordme@users.noreply.github.com> +Erica Peterson nordme +Erik Hornberger er06645810 +Erik Hornberger Erik Hornberger +Erkka Heinila Teekuningas +Etienne de Montalivet +Evgenii Kalenkovich kalenkovich +Evgeny Goldstein <84768107+evgenygoldstein@users.noreply.github.com> evgenygoldstein <84768107+evgenygoldstein@users.noreply.github.com> +Ezequiel Mikulan <39155887+ezemikulan@users.noreply.github.com> ezemikulan <39155887+ezemikulan@users.noreply.github.com> +Fahimeh Mamashli <33672431+fmamashli@users.noreply.github.com> fmamashli <33672431+fmamashli@users.noreply.github.com> Fede Raimondo Fede -Fede Raimondo Fede Raimondo +Fede Raimondo Fede Raimondo Fede Raimondo Fede Raimondo -Fede Raimondo Federico Raimondo +Fede Raimondo Fede Raimondo Fede Raimondo Federico Raimondo -Fede Raimondo Fede Raimondo -Emily Stephen emilyps14 -Emily Stephen Emily P. Stephen -Marian Dovgialo mdovgialo -Marian Dovgialo Marian Dovgialo +Fede Raimondo Federico Raimondo +Federico Zamberlan <44038765+fzamberlan@users.noreply.github.com> +Felix Klotzsche eioe +Felix Klotzsche eioe +Félix Raimundo Felix Raimundo +Frederik D. 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García Alanis Jose Alanis +José C. García Alanis Jose C. G. Alanis <12409129+JoseAlanis@users.noreply.github.com> +José C. García Alanis José C. G. Alanis <12409129+JoseAlanis@users.noreply.github.com> +José C. García Alanis José C. García Alanis <12409129+JoseAlanis@users.noreply.github.com> +Joshua J Bear +Joshua Teves Joshua Teves +Kaisu Lankinen <41806798+klankinen@users.noreply.github.com> klankinen <41806798+klankinen@users.noreply.github.com> +Kambiz Tabavi Kambiz Tavabi +Kambiz Tabavi kambysese +Katarina Slama katarinaslama +Kostiantyn Maksymenko kostiantyn maksymenko +Kostiantyn Maksymenko Maksymenko Kostiantyn +Kostiantyn Maksymenko Maksymenko Kostiantyn Laetitia Grabot LaetitiaG -Nicolas Barascud nbara -Nicolas Barascud Nicolas Barascud <10333715+nbara@users.noreply.github.com> -Lukáš Hejtmánek hejtmy -Ramonapariciog Apariciogarcia ramonapariciog -Mathurin Massias mathurinm -Simon Kern skjerns -Simon Kern skjerns <14980558+skjerns@users.noreply.github.com> -Simon Kern Simon Kern <14980558+skjerns@users.noreply.github.com> -Steven M. Gutstein S. M. Gutstein -Steven M. 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Bailey Chris Bailey -Alexander Rudiuk Alexander Rudiuk -Tanay Gahlot Tanay -Erkka Heinila Teekuningas -Burkhard Maess Burkhard Maess -Lorenz Esch Lorenz Esch -Joris Van den Bossche Joris Van den Bossche -Christina Zhao ChristinaZhao -Rotem Falach Falach -Nicolas Gensollen Gensollen -Matteo Anelli Matteo Anelli -Ram Pari Ram -Steven Bierer Steven Bierer <40672003+NeuroLaunch@users.noreply.github.com> -Valerii Chirkov Valerii <42982039+vagechirkov@users.noreply.github.com> -Zhi Zhang <850734033@qq.com> ZHANG Zhi <850734033@qq.com> -Ana Radanovic anaradanovic <79697247+anaradanovic@users.noreply.github.com> -Catalina Magalvan <79813952+catalinamagalvan@users.noreply.github.com> catalinamagalvan <79813952+catalinamagalvan@users.noreply.github.com> -Christian Mista cmista <79416030+cmista@users.noreply.github.com> -Felix Klotzsche eioe -Felix Klotzsche eioe -Enrico Varano <69973551+enricovara@users.noreply.github.com> enricovara <69973551+enricovara@users.noreply.github.com> -Giorgio Marinato neurogima <76406896+neurogima@users.noreply.github.com> -Erica Peterson nordme -Erica Peterson nordme <38704848+nordme@users.noreply.github.com> -Timon Merk <38216460+timonmerk@users.noreply.github.com> timonmerk <38216460+timonmerk@users.noreply.github.com> -Anna Padee <44297909+apadee@users.noreply.github.com> apadee <44297909+apadee@users.noreply.github.com> -Cora Kim <41998428+kimcoco@users.noreply.github.com> kimcoco <41998428+kimcoco@users.noreply.github.com> -Matt Sanderson monkeyman192 -Silvia Cotroneo <78911192+sfc-neuro@users.noreply.github.com> sfc-neuro <78911192+sfc-neuro@users.noreply.github.com> -Sebastien Treguer DataFox -Tristan Stenner Tristan Stenner -Evgeny Goldstein <84768107+evgenygoldstein@users.noreply.github.com> evgenygoldstein <84768107+evgenygoldstein@users.noreply.github.com> -Jan Sosulski jsosulski -John Samuelsson johnsam7 +Pierre Ablin pierreablin Pierre-Antoine Bannier PAB Pierre-Antoine Bannier Pierre-Antoine Bannier -Pierre-Antoine Bannier Pierre-Antoine Bannier Pierre-Antoine Bannier Pierre-Antoine Bannier +Pierre-Antoine Bannier Pierre-Antoine Bannier Pierre-Antoine Bannier Pierre-Antoine Bannier -Adam Li Adam Li -Adam Li Adam Li -Alex Rockhill Alex +Praveen Sripad prav +Praveen Sripad prav +Ram Pari Ram +Ramonapariciog Apariciogarcia ramonapariciog +Reza Nasri Reza +Reza Nasri RezaNasri +Roan LaPlante aestrivex +Rob Luke Robert Luke <748691+rob-luke@users.noreply.github.com> +Robin Tibor Schirrmeister robintibor +Romain Trachel Romain Trachel +Romain Trachel Romain Trachel +Romain Trachel trachelr +Roman Goj +Ross Maddox rkmaddox +Ross Maddox Ross Maddox +Ross Maddox unknown +Rotem Falach Falach Ryan Law Ryan Law -David Julien David JULIEN -Gansheng Tan <49130176+GanshengT@users.noreply.github.com> Gansheng TAN <49130176+GanshengT@users.noreply.github.com> -Timothy Gates Tim Gates -Etienne de Montalivet -Federico Zamberlan <44038765+fzamberlan@users.noreply.github.com> -John Veillette -Michiru Kaneda rcmdnk -Matthias Eberlein <41163089+MatthiasEb@users.noreply.github.com> MatthiasEb <41163089+MatthiasEb@users.noreply.github.com> -Nikolai Chapochnikov <23103092+chapochn@users.noreply.github.com> Nikolai M Chapochnikov <23103092+chapochn@users.noreply.github.com> -Nikolai Chapochnikov <23103092+chapochn@users.noreply.github.com> chapochn <23103092+chapochn@users.noreply.github.com> +Samuel Deslauriers-Gauthier Samuel Deslauriers-Gauthier +Sara Sommariva sarasommariva +Sebastien Treguer DataFox Senwen Deng <36327760+snwnde@users.noreply.github.com> Senwen DENG <36327760+snwnde@users.noreply.github.com> -Rob Luke Robert Luke <748691+rob-luke@users.noreply.github.com> -Martin Schulz Martin Schulz <46245704+marsipu@users.noreply.github.com> -Joshua Teves Joshua Teves -Mathieu Scheltienne Mathieu Scheltienne -Mathieu Scheltienne Mathieu Scheltienne <73893616+mscheltienne@users.noreply.github.com> -Maureen Shader <55732126+mshader@users.noreply.github.com> mshader <55732126+mshader@users.noreply.github.com> +Silvia Cotroneo <78911192+sfc-neuro@users.noreply.github.com> sfc-neuro <78911192+sfc-neuro@users.noreply.github.com> +Simon Kern Simon Kern <14980558+skjerns@users.noreply.github.com> +Simon Kern skjerns <14980558+skjerns@users.noreply.github.com> +Simon Kern skjerns +Sondre Foslien sondrfos +Steve Matindi stevemats +Steven Bierer Steven Bierer <40672003+NeuroLaunch@users.noreply.github.com> +Steven M. Gutstein S. M. Gutstein +Steven M. Gutstein smgutstein +T. Wang <81429617+twang5@users.noreply.github.com> twang5 <81429617+twang5@users.noreply.github.com> +Tanay Gahlot Tanay +Teon Brooks +Teon Brooks +Teon Brooks Teon +Teon Brooks Teon Brooks +Thomas Donoghue Tom +Thomas Radman +Timon Merk <38216460+timonmerk@users.noreply.github.com> timonmerk <38216460+timonmerk@users.noreply.github.com> +Timothy Gates Tim Gates +Tod Flak <45362686+todflak@users.noreply.github.com> todflak <45362686+todflak@users.noreply.github.com> +Tristan Stenner Tristan Stenner +Tziona NessAiver TzionaN +Valerii Chirkov Valerii <42982039+vagechirkov@users.noreply.github.com> +Victoria Peterson vpeterson +Yousra Bekhti Yoursa BEKHTI +Yousra Bekhti Yoursa BEKHTI +Yousra Bekhti Yousra BEKHTI +Yousra Bekhti yousrabk +Zhi Zhang <850734033@qq.com> ZHANG Zhi <850734033@qq.com> diff --git a/CITATION.cff b/CITATION.cff new file mode 100644 index 00000000000..fe9a83eb03f --- /dev/null +++ b/CITATION.cff @@ -0,0 +1,655 @@ +cff-version: 1.2.0 +title: "MNE-Python" +message: "If you use this software, please cite both the software itself, and the paper listed in the preferred-citation field." +version: 1.1.0 +date-released: "2022-08-03" +commit: c210dfb4a1cab292c47c892fb2ee3c0b308ec90b +doi: 10.5281/zenodo.592483 +keywords: + - MEG + - magnetoencephalography + - EEG + - electroencephalography + - fNIRS + - "functional near-infrared spectroscopy" + - iEEG + - "intracranial EEG" + - eCoG + - electrocorticography + - DBS + - "deep brain stimulation" +authors: + - family-names: Larson + given-names: Eric + - family-names: Gramfort + given-names: Alexandre + - family-names: Engemann + given-names: Denis A + - family-names: Leppakangas + given-names: Jaakko + - family-names: Brodbeck + given-names: Christian + - family-names: Jas + given-names: Mainak + - family-names: Brooks + given-names: Teon + - family-names: Sassenhagen + given-names: Jona + - family-names: Luessi + given-names: Martin + - family-names: King + given-names: Jean-Remi + - family-names: McCloy + given-names: Daniel + - family-names: Goj + given-names: Roman + - family-names: Favelier + given-names: Guillaume + - family-names: Höchenberger + given-names: Richard + - family-names: Brunner + given-names: Clemens + - family-names: van Vliet + given-names: Marijn + - family-names: Wronkiewicz + given-names: Mark + - family-names: Holdgraf + given-names: Chris + - family-names: Massich + given-names: Joan + - family-names: Bekhti + given-names: Yousra + - family-names: Rockhill + given-names: Alex + - family-names: Appelhoff + given-names: Stefan + - family-names: Leggitt + given-names: Alan + - family-names: Dykstra + given-names: Andrew + - family-names: Luke + given-names: Rob + - family-names: Trachel + given-names: Romain + - family-names: De Santis + given-names: Lorenzo + - family-names: Panda + given-names: Asish + - family-names: Magnuski + given-names: Mikołaj + - family-names: Billinger + given-names: Martin + - family-names: Westner + given-names: Britta + - family-names: Wakeman + given-names: Dan G + - family-names: Strohmeier + given-names: Daniel + - family-names: Bharadwaj + given-names: Hari + - family-names: Linzen + given-names: Tal + - family-names: Barachant + given-names: Alexandre + - family-names: Scheltienne + given-names: Mathieu + - family-names: Ruzich + given-names: Emily + - family-names: Bailey + given-names: Christopher J + - family-names: Li + given-names: Adam + - family-names: Moutard + given-names: Clément + - family-names: Bloy + given-names: Luke + - family-names: Raimondo + given-names: Fede + - family-names: Nurminen + given-names: Jussi + - family-names: Montoya + given-names: Jair + - family-names: Woodman + given-names: Marmaduke + - family-names: Lee + given-names: Ingoo + - family-names: Schulz + given-names: Martin + - family-names: Foti + given-names: Nick + - family-names: Nangini + given-names: Cathy + - family-names: García Alanis + given-names: José C + - family-names: Maddox + given-names: Ross + - family-names: LaPlante + given-names: Roan + - family-names: Drew + given-names: Ashley + - family-names: Dinh + given-names: Christoph + - family-names: Hauk + given-names: Olaf + - family-names: Dumas + given-names: Guillaume + - family-names: Hartmann + given-names: Thomas + - family-names: Benerradi + given-names: Johann + - family-names: Pasler + given-names: Paul + - family-names: Repplinger + given-names: Stefan + - family-names: Rudiuk + given-names: Alexander + - family-names: Radanovic + given-names: Ana + - family-names: Buran + given-names: Brad + - family-names: Massias + given-names: Mathurin + - family-names: Hämäläinen + given-names: Matti + - family-names: Sripad + given-names: Praveen + - family-names: Chirkov + given-names: Valerii + - family-names: Mullins + given-names: Christopher + - family-names: Raimundo + given-names: Félix + - family-names: Alday + given-names: Phillip + - family-names: Pari + given-names: Ram + - family-names: Kornblith + given-names: Simon + - family-names: Halchenko + given-names: Yaroslav + - family-names: Luo + given-names: Yu-Han + - family-names: Ort + given-names: Eduard + - family-names: Kasper + given-names: Johannes + - family-names: Doelling + given-names: Keith + - family-names: Jensen + given-names: Mads + - family-names: Gahlot + given-names: Tanay + - family-names: Nunes + given-names: Adonay + - family-names: Gütlin + given-names: Dirk + - name: kjs + - family-names: Weinstein + given-names: Alejandro + - family-names: Lamus + given-names: Camilo + - family-names: Galván + given-names: Catalina María + - family-names: Moënne-Loccoz + given-names: Cristóbal + - family-names: Houck + given-names: Jon + - family-names: Klein + given-names: Natalie + - family-names: Rantala + given-names: Antti + - family-names: Maess + given-names: Burkhard + - family-names: O'Reilly + given-names: Christian + - family-names: Peterson + given-names: Erica + - family-names: Heinila + given-names: Erkka + - family-names: Kolkhorst + given-names: Henrich + - family-names: Banville + given-names: Hubert + - family-names: Hanna + given-names: Jeff + - family-names: Clarke + given-names: Maggie + - family-names: Anelli + given-names: Matteo + - family-names: Kaneda + given-names: Michiru + - family-names: Bannier + given-names: Pierre-Antoine + - family-names: Choudhary + given-names: Saket + - family-names: Huberty + given-names: Scott + - family-names: Kern + given-names: Simon + - family-names: Forster + given-names: Carina + - family-names: Kim + given-names: Cora + - family-names: Klotzsche + given-names: Felix + - family-names: Wong + given-names: Fu-Te + - family-names: Kojcic + given-names: Ivana + - family-names: Nielsen + given-names: Jesper Duemose + - family-names: Lankinen + given-names: Kaisu + - family-names: Tabavi + given-names: Kambiz + - family-names: Maksymenko + given-names: Kostiantyn + - family-names: Thibault + given-names: Louis + - family-names: Gayraud + given-names: Nathalie + - family-names: Ward + given-names: Nick + - name: dependabot[bot] + - family-names: Gauthier + given-names: Antoine + - family-names: Pinsard + given-names: Basile + - family-names: Welke + given-names: Dominik + - family-names: Stephen + given-names: Emily + - family-names: Hornberger + given-names: Erik + - family-names: Hathaway + given-names: Evan + - family-names: Kalenkovich + given-names: Evgenii + - family-names: Mamashli + given-names: Fahimeh + - family-names: Marinato + given-names: Giorgio + - family-names: Anevar + given-names: Hafeza + - family-names: Zhang + given-names: Jack + - family-names: Sosulski + given-names: Jan + - family-names: Stout + given-names: Jeff + - family-names: Eisenman + given-names: Larry + - family-names: Esch + given-names: Lorenz + - family-names: Barascud + given-names: Nicolas + - family-names: Legrand + given-names: Nicolas + - family-names: Falach + given-names: Rotem + - family-names: Deslauriers-Gauthier + given-names: Samuel + - family-names: Cotroneo + given-names: Silvia + - family-names: Matindi + given-names: Steve + - family-names: Bierer + given-names: Steven + - family-names: Férat + given-names: Victor + - family-names: Peterson + given-names: Victoria + - family-names: Tonin + given-names: Alessandro + - family-names: Kovrig + given-names: Alexander + - family-names: Pascarella + given-names: Annalisa + - family-names: Karekal + given-names: Apoorva + - family-names: Zhao + given-names: Christina + - family-names: Krzemiński + given-names: Dominik + - family-names: Welke + given-names: Dominik + - family-names: Makowski + given-names: Dominique + - family-names: Mikulan + given-names: Ezequiel + - family-names: Schiratti + given-names: Jean-Baptiste + - family-names: Evans + given-names: Jen + - family-names: Drew + given-names: Jordan + - family-names: Teves + given-names: Joshua + - family-names: Mathewson + given-names: Kyle + - family-names: Gwilliams + given-names: Laura + - family-names: Varghese + given-names: Lenny + - name: Lx37 + - family-names: Dovgialo + given-names: Marian + - family-names: Boggess + given-names: Matt + - family-names: Eberlein + given-names: Matthias + - family-names: Sherif + given-names: Mohamed + - family-names: Kozhemiako + given-names: Nataliia + - family-names: Srinivasan + given-names: Naveen + - family-names: Wilming + given-names: Niklas + - family-names: Chapochnikov + given-names: Nikolai + - family-names: Kozynets + given-names: Oleh + - family-names: Ablin + given-names: Pierre + - family-names: Bertrand + given-names: Quentin + - family-names: Shoorangiz + given-names: Reza + - family-names: Hübner + given-names: Rodrigo + - family-names: Sommariva + given-names: Sara + - family-names: Khan + given-names: Sheraz + - family-names: Herbst + given-names: Sophie + - family-names: Datta + given-names: Sumalyo + - family-names: Jochmann + given-names: Thomas + - family-names: Flak + given-names: Tod + - family-names: Dupré la Tour + given-names: Tom + - family-names: Stenner + given-names: Tristan + - family-names: NessAiver + given-names: Tziona + - name: akshay0724 + - name: sviter + - family-names: Hindle + given-names: Abram + - family-names: Koutsou + given-names: Achilleas + - family-names: Fecker + given-names: Adeline + - family-names: Wagner + given-names: Adina + - family-names: Ciok + given-names: Alex + - family-names: Pradhan + given-names: Aniket + - family-names: Padee + given-names: Anna + - family-names: Dubarry + given-names: Anne-Sophie + - family-names: Waniek + given-names: Anton Nikolas + - family-names: Singhal + given-names: Archit + - family-names: Rokem + given-names: Ariel + - family-names: Hurst + given-names: Austin + - family-names: Beasley + given-names: Ben + - family-names: Nicenboim + given-names: Bruno + - family-names: de la Torre + given-names: Carlos + - family-names: Clauss + given-names: Christian + - family-names: Mista + given-names: Christian + - family-names: Li + given-names: Chun-Hui + - family-names: Braboszcz + given-names: Claire + - family-names: Sleiter + given-names: Darin Erat + - family-names: Haslacher + given-names: David + - family-names: Sabbagh + given-names: David + - family-names: Kostas + given-names: Demetres + - family-names: Petkova + given-names: Desislava + - family-names: Altukhov + given-names: Dmitrii + - family-names: Eich + given-names: Eberhard + - family-names: DuPre + given-names: Elizabeth + - family-names: Lau + given-names: Ellen + - family-names: Olivetti + given-names: Emanuele + - family-names: Varano + given-names: Enrico + - family-names: de Montalivet + given-names: Etienne + - family-names: Goldstein + given-names: Evgeny + - family-names: Zamberlan + given-names: Federico + - family-names: Weber + given-names: Frederik D + - family-names: Tan + given-names: Gansheng + - family-names: Brookshire + given-names: Geoff + - family-names: Maymandi + given-names: Hamid + - family-names: Sonntag + given-names: Hermann + - family-names: Ye + given-names: Hongjiang + - family-names: Machairas + given-names: Ilias + - family-names: Kaczmarzyk + given-names: Jakub + - family-names: Zerfowski + given-names: Jan + - family-names: van den Bosch + given-names: Jasper J F + - family-names: Van Der Donckt + given-names: Jeroen + - family-names: van der Meer + given-names: Johan + - family-names: Niediek + given-names: Johannes + - family-names: Veillette + given-names: John + - family-names: Koen + given-names: Josh + - family-names: Bear + given-names: Joshua J + - family-names: Zhu + given-names: Judy D + - family-names: Dammers + given-names: Juergen + - family-names: Galán + given-names: Julia Guiomar Niso + - family-names: Slama + given-names: Katarina + - family-names: Leinweber + given-names: Katrin + - family-names: Grabot + given-names: Laetitia + - family-names: Andersen + given-names: Lau Møller + - family-names: Barbosa + given-names: Leonardo S + - family-names: Hamilton + given-names: Liberty + - family-names: Alfine + given-names: Lorenzo + - family-names: Gemein + given-names: Lukas + - family-names: Hecker + given-names: Lukas + - family-names: Hejtmánek + given-names: Lukáš + - family-names: Kitzbichler + given-names: Manfred + - family-names: Kumar + given-names: Manoj + - family-names: Kadwani + given-names: Manorama + - family-names: Sutela + given-names: Manu + - family-names: Koculak + given-names: Marcin + - family-names: van Harmelen + given-names: Martin + - name: MartinBaBer + - family-names: Courtemanche + given-names: Matt + - family-names: Tucker + given-names: Matt + - family-names: Visconti di Oleggio Castello + given-names: Matteo + - family-names: Dold + given-names: Matthias + - family-names: Toivonen + given-names: Matti + - family-names: Shader + given-names: Maureen + - family-names: Krause + given-names: Michael + - family-names: Rybář + given-names: Milan + - family-names: He + given-names: Mingjian + - family-names: Daneshzand + given-names: Mohammad + - family-names: Gensollen + given-names: Nicolas + - family-names: Proulx + given-names: Nicole + - family-names: Chalas + given-names: Nikolas + - family-names: Sundaram + given-names: Padma + - family-names: Roujansky + given-names: Paul + - family-names: Silva + given-names: Pedro + - family-names: Molfese + given-names: Peter J + - family-names: Li + given-names: Quanliang + - family-names: Nadkarni + given-names: Rahul + - family-names: Gatti + given-names: Ramiro + - family-names: Apariciogarcia + given-names: Ramonapariciog + - family-names: Nasri + given-names: Reza + - family-names: Koehler + given-names: Richard + - family-names: Stargardsky + given-names: Riessarius + - family-names: Oostenveld + given-names: Robert + - family-names: Seymour + given-names: Robert + - family-names: Schirrmeister + given-names: Robin Tibor + - family-names: Law + given-names: Ryan + - family-names: Pai + given-names: Sagun + - family-names: Perry + given-names: Sam + - family-names: Major + given-names: Sebastian + - family-names: Treguer + given-names: Sebastien + - family-names: Castaño + given-names: Sebastián + - family-names: Deng + given-names: Senwen + - family-names: Antopolskiy + given-names: Sergey + - family-names: Wong + given-names: Simeon + - family-names: Poil + given-names: Simon-Shlomo + - family-names: Foslien + given-names: Sondre + - family-names: Singh + given-names: Sourav + - family-names: Chambon + given-names: Stanislas + - family-names: Bethard + given-names: Steven + - family-names: Gutstein + given-names: Steven M + - family-names: Meyer + given-names: Svea Marie + - family-names: Wang + given-names: T + - family-names: Papadopoulo + given-names: Theodore + - family-names: Donoghue + given-names: Thomas + - family-names: Radman + given-names: Thomas + - family-names: Merk + given-names: Timon + - family-names: Gates + given-names: Timothy + - family-names: Clausner + given-names: Tommy + - family-names: Xia + given-names: Xiaokai + - family-names: Zhang + given-names: Zhi + - name: buildqa +preferred-citation: + title: "MEG and EEG Data Analysis with MNE-Python" + journal: "Frontiers in Neuroscience" + type: article + year: 2013 + volume: 7 + issue: 267 + start: 1 + end: 13 + doi: 10.3389/fnins.2013.00267 + authors: + - family-names: Gramfort + given-names: Alexandre + - family-names: Luessi + given-names: Martin + - family-names: Larson + given-names: Eric + - family-names: Engemann + given-names: Denis A. + - family-names: Strohmeier + given-names: Daniel + - family-names: Brodbeck + given-names: Christian + - family-names: Goj + given-names: Roman + - family-names: Jas + given-names: Mainak + - family-names: Brooks + given-names: Teon + - family-names: Parkkonen + given-names: Lauri + - family-names: Hämäläinen + given-names: Matti S. diff --git a/MANIFEST.in b/MANIFEST.in index a53155214c7..6c1aa9ff47f 100644 --- a/MANIFEST.in +++ b/MANIFEST.in @@ -60,6 +60,7 @@ exclude *.yml exclude ignore_words.txt exclude .mailmap exclude codemeta.json +exclude CITATION.cff recursive-exclude mne *.pyc recursive-exclude doc * diff --git a/SECURITY.md b/SECURITY.md index c4f2140dc94..84d1384b8ec 100644 --- a/SECURITY.md +++ b/SECURITY.md @@ -10,9 +10,9 @@ without a proper 6-month deprecation cycle. | Version | Supported | | ------- | ------------------------ | -| 1.1.x | :heavy_check_mark: (dev) | -| 1.0.x | :heavy_check_mark: | -| < 1.0 | :x: | +| 1.2.x | :heavy_check_mark: (dev) | +| 1.1.x | :heavy_check_mark: | +| < 1.1 | :x: | ## Reporting a Vulnerability diff --git a/codemeta.json b/codemeta.json index 6fed47fe619..8d726d575e7 100644 --- a/codemeta.json +++ b/codemeta.json @@ -5,22 +5,28 @@ "codeRepository": "git+https://github.com/mne-tools/mne-python.git", "dateCreated": "2010-12-26", "datePublished": "2014-08-04", - "dateModified": "2022-03-21", - "downloadUrl": "https://github.com/mne-tools/mne-python/archive/v1.0.0.zip", + "dateModified": "2022-08-03", + "downloadUrl": "https://github.com/mne-tools/mne-python/archive/v1.1.0.zip", "issueTracker": "https://github.com/mne-tools/mne-python/issues", "name": "MNE-Python", - "version": "1.0.0", + "version": "1.1.0", "description": "MNE-Python is an open-source Python package for exploring, visualizing, and analyzing human neurophysiological data. It provides methods for data input/output, preprocessing, visualization, source estimation, time-frequency analysis, connectivity analysis, machine learning, and statistics.", "applicationCategory": "Neuroscience", "developmentStatus": "active", "referencePublication": "https://doi.org/10.3389/fnins.2013.00267", "keywords": [ "MEG", + "magnetoencephalography", "EEG", + "electroencephalography", "fNIRS", - "ECoG", - "sEEG", - "DBS" + "functional near-infrared spectroscopy", + "iEEG", + "intracranial EEG", + "eCoG", + "electrocorticography", + "DBS", + "deep brain stimulation" ], "programmingLanguage": [ "Python" @@ -120,18 +126,18 @@ "givenName":"Richard", "familyName": "Höchenberger" }, - { - "@type":"Person", - "email":"w.m.vanvliet@gmail.com", - "givenName":"Marijn", - "familyName": "van Vliet" - }, { "@type":"Person", "email":"clemens.brunner@gmail.com", "givenName":"Clemens", "familyName": "Brunner" }, + { + "@type":"Person", + "email":"w.m.vanvliet@gmail.com", + "givenName":"Marijn", + "familyName": "van Vliet" + }, { "@type":"Person", "email":"wronk.mark@gmail.com", @@ -158,9 +164,9 @@ }, { "@type":"Person", - "email":"leggitta3@gmail.com", - "givenName":"Alan", - "familyName": "Leggitt" + "email":"aprockhill206@gmail.com", + "givenName":"Alex", + "familyName": "Rockhill" }, { "@type":"Person", @@ -168,6 +174,12 @@ "givenName":"Stefan", "familyName": "Appelhoff" }, + { + "@type":"Person", + "email":"leggitta3@gmail.com", + "givenName":"Alan", + "familyName": "Leggitt" + }, { "@type":"Person", "email":"andrew.r.dykstra@gmail.com", @@ -176,15 +188,15 @@ }, { "@type":"Person", - "email":"romain.trachel@inria.fr", - "givenName":"Romain", - "familyName": "Trachel" + "email":"code@robertluke.net", + "givenName":"Rob", + "familyName": "Luke" }, { "@type":"Person", - "email":"", - "givenName":"Robert", - "familyName": "Luke" + "email":"romain.trachel@inria.fr", + "givenName":"Romain", + "familyName": "Trachel" }, { "@type":"Person", @@ -198,12 +210,6 @@ "givenName":"Asish", "familyName": "Panda" }, - { - "@type":"Person", - "email":"aprockhill206@gmail.com", - "givenName":"Alex", - "familyName": "Rockhill" - }, { "@type":"Person", "email":"mmagnuski@swps.edu.pl", @@ -252,6 +258,12 @@ "givenName":"Alexandre", "familyName": "Barachant" }, + { + "@type":"Person", + "email":"mathieu.scheltienne@gmail.com", + "givenName":"Mathieu", + "familyName": "Scheltienne" + }, { "@type":"Person", "email":"emilyr@nmr.mgh.harvard.edu", @@ -264,6 +276,12 @@ "givenName":"Christopher J", "familyName": "Bailey" }, + { + "@type":"Person", + "email":"adam2392@gmail.com", + "givenName":"Adam", + "familyName": "Li" + }, { "@type":"Person", "email":"clement.moutard@gmail.com", @@ -276,12 +294,6 @@ "givenName":"Luke", "familyName": "Bloy" }, - { - "@type":"Person", - "email":"adam2392@gmail.com", - "givenName":"Adam", - "familyName": "Li" - }, { "@type":"Person", "email":"federaimondo@gmail.com", @@ -294,12 +306,6 @@ "givenName":"Jussi", "familyName": "Nurminen" }, - { - "@type":"Person", - "email":"", - "givenName":"Mathieu", - "familyName": "Scheltienne" - }, { "@type":"Person", "email":"montoya.jair.m@gmail.com", @@ -318,6 +324,12 @@ "givenName":"Ingoo", "familyName": "Lee" }, + { + "@type":"Person", + "email":"dev@earthman-music.de", + "givenName":"Martin", + "familyName": "Schulz" + }, { "@type":"Person", "email":"nfoti01@gmail.com", @@ -330,24 +342,30 @@ "givenName":"Cathy", "familyName": "Nangini" }, - { - "@type":"Person", - "email":"dev@earthman-music.de", - "givenName":"Martin", - "familyName": "Schulz" - }, { "@type":"Person", "email":"joialanisson@gmail.com", "givenName":"José C", "familyName": "García Alanis" }, + { + "@type":"Person", + "email":"ross.maddox@rochester.edu", + "givenName":"Ross", + "familyName": "Maddox" + }, { "@type":"Person", "email":"aestrivex@gmail.com", "givenName":"Roan", "familyName": "LaPlante" }, + { + "@type":"Person", + "email":"", + "givenName":"Ashley", + "familyName": "Drew" + }, { "@type":"Person", "email":"chdinh@nmr.mgh.harvard.edu", @@ -366,18 +384,18 @@ "givenName":"Guillaume", "familyName": "Dumas" }, - { - "@type":"Person", - "email":"rkmaddox@uw.edu", - "givenName":"Ross", - "familyName": "Maddox" - }, { "@type":"Person", "email":"thomas.hartmann@th-ht.de", "givenName":"Thomas", "familyName": "Hartmann" }, + { + "@type":"Person", + "email":"johann.benerradi@gmail.com", + "givenName":"Johann", + "familyName": "Benerradi" + }, { "@type":"Person", "email":"paul@ppasler.de", @@ -408,12 +426,6 @@ "givenName":"Brad", "familyName": "Buran" }, - { - "@type":"Person", - "email":"johann.benerradi@gmail.com", - "givenName":"Johann", - "familyName": "Benerradi" - }, { "@type":"Person", "email":"mathurin.massias@gmail.com", @@ -543,8 +555,8 @@ { "@type":"Person", "email":"", - "givenName":"Catalina", - "familyName": "Magalvan" + "givenName":"Catalina María", + "familyName": "Galván" }, { "@type":"Person", @@ -552,6 +564,12 @@ "givenName":"Cristóbal", "familyName": "Moënne-Loccoz" }, + { + "@type":"Person", + "email":"jon.houck@gmail.com", + "givenName":"Jon", + "familyName": "Houck" + }, { "@type":"Person", "email":"neklein@andrew.cmu.edu", @@ -570,6 +588,12 @@ "givenName":"Burkhard", "familyName": "Maess" }, + { + "@type":"Person", + "email":"christian.oreilly@gmail.com", + "givenName":"Christian", + "familyName": "O'Reilly" + }, { "@type":"Person", "email":"nordme@uw.edu", @@ -600,12 +624,6 @@ "givenName":"Jeff", "familyName": "Hanna" }, - { - "@type":"Person", - "email":"jon.houck@gmail.com", - "givenName":"Jon", - "familyName": "Houck" - }, { "@type":"Person", "email":"mdclarke@uw.edu", @@ -618,6 +636,12 @@ "givenName":"Matteo", "familyName": "Anelli" }, + { + "@type":"Person", + "email":"rcmdnk@gmail.com", + "givenName":"Michiru", + "familyName": "Kaneda" + }, { "@type":"Person", "email":"pierreantoine.bannier@gmail.com", @@ -632,9 +656,27 @@ }, { "@type":"Person", - "email":"christian.oreilly@gmail.com", - "givenName":"Christian", - "familyName": "O'Reilly" + "email":"", + "givenName":"Scott", + "familyName": "Huberty" + }, + { + "@type":"Person", + "email":"simon.kern@online.de", + "givenName":"Simon", + "familyName": "Kern" + }, + { + "@type":"Person", + "email":"carinaforster0611@gmail.com", + "givenName":"Carina", + "familyName": "Forster" + }, + { + "@type":"Person", + "email":"", + "givenName":"Cora", + "familyName": "Kim" }, { "@type":"Person", @@ -684,12 +726,6 @@ "givenName":"Louis", "familyName": "Thibault" }, - { - "@type":"Person", - "email":"rcmdnk@gmail.com", - "givenName":"Michiru", - "familyName": "Kaneda" - }, { "@type":"Person", "email":"nathalie.gayraud@inria.fr", @@ -704,9 +740,9 @@ }, { "@type":"Person", - "email":"ross.maddox@rochester.edu", - "givenName":"Ross", - "familyName": "Maddox" + "email":"", + "givenName":"", + "familyName": "dependabot[bot]" }, { "@type":"Person", @@ -722,9 +758,9 @@ }, { "@type":"Person", - "email":"", - "givenName":"Cora", - "familyName": "Kim" + "email":"dominik.welke@web.de", + "givenName":"Dominik", + "familyName": "Welke" }, { "@type":"Person", @@ -738,6 +774,12 @@ "givenName":"Erik", "familyName": "Hornberger" }, + { + "@type":"Person", + "email":"", + "givenName":"Evan", + "familyName": "Hathaway" + }, { "@type":"Person", "email":"e.kalenkovich@gmail.com", @@ -822,12 +864,6 @@ "givenName":"Silvia", "familyName": "Cotroneo" }, - { - "@type":"Person", - "email":"simon.kern@online.de", - "givenName":"Simon", - "familyName": "Kern" - }, { "@type":"Person", "email":"stevematindi@gmail.com", @@ -852,6 +888,12 @@ "givenName":"Victoria", "familyName": "Peterson" }, + { + "@type":"Person", + "email":"alessandro.tonin@wysscenter.ch", + "givenName":"Alessandro", + "familyName": "Tonin" + }, { "@type":"Person", "email":"alexander.kovrig@gmail.com", @@ -890,9 +932,9 @@ }, { "@type":"Person", - "email":"", - "givenName":"Evan", - "familyName": "Hathaway" + "email":"dom.mak19@gmail.com", + "givenName":"Dominique", + "familyName": "Makowski" }, { "@type":"Person", @@ -912,6 +954,18 @@ "givenName":"Jen", "familyName": "Evans" }, + { + "@type":"Person", + "email":"", + "givenName":"Jordan", + "familyName": "Drew" + }, + { + "@type":"Person", + "email":"jbtevespro@gmail.com", + "givenName":"Joshua", + "familyName": "Teves" + }, { "@type":"Person", "email":"kylemath@gmail.com", @@ -938,15 +992,9 @@ }, { "@type":"Person", - "email":"", - "givenName":"Martin", - "familyName": "Schulz" - }, - { - "@type":"Person", - "email":"mathieu.scheltienne@gmail.com", - "givenName":"Mathieu", - "familyName": "Scheltienne" + "email":"mdovgialo@fabrizzio.zfb.fuw.edu.pl", + "givenName":"Marian", + "familyName": "Dovgialo" }, { "@type":"Person", @@ -972,12 +1020,24 @@ "givenName":"Nataliia", "familyName": "Kozhemiako" }, + { + "@type":"Person", + "email":"", + "givenName":"Naveen", + "familyName": "Srinivasan" + }, { "@type":"Person", "email":"niklas.wilming@gmail.com", "givenName":"Niklas", "familyName": "Wilming" }, + { + "@type":"Person", + "email":"", + "givenName":"Nikolai", + "familyName": "Chapochnikov" + }, { "@type":"Person", "email":"", @@ -996,6 +1056,12 @@ "givenName":"Quentin", "familyName": "Bertrand" }, + { + "@type":"Person", + "email":"r.shoorangiz@live.com", + "givenName":"Reza", + "familyName": "Shoorangiz" + }, { "@type":"Person", "email":"rhubner@gmail.com", @@ -1050,6 +1116,12 @@ "givenName":"Tristan", "familyName": "Stenner" }, + { + "@type":"Person", + "email":"tzionan@mail.tau.ac.il", + "givenName":"Tziona", + "familyName": "NessAiver" + }, { "@type":"Person", "email":"akshay0724@gmail.com", @@ -1074,12 +1146,24 @@ "givenName":"Achilleas", "familyName": "Koutsou" }, + { + "@type":"Person", + "email":"", + "givenName":"Adeline", + "familyName": "Fecker" + }, { "@type":"Person", "email":"adina.wagner@t-online.de", "givenName":"Adina", "familyName": "Wagner" }, + { + "@type":"Person", + "email":"", + "givenName":"Alex", + "familyName": "Ciok" + }, { "@type":"Person", "email":"aniket17133@iiitd.ac.in", @@ -1104,6 +1188,12 @@ "givenName":"Anton Nikolas", "familyName": "Waniek" }, + { + "@type":"Person", + "email":"", + "givenName":"Archit", + "familyName": "Singhal" + }, { "@type":"Person", "email":"arokem@gmail.com", @@ -1116,6 +1206,12 @@ "givenName":"Austin", "familyName": "Hurst" }, + { + "@type":"Person", + "email":"code@musicinmybrain.net", + "givenName":"Ben", + "familyName": "Beasley" + }, { "@type":"Person", "email":"bruno.nicenboim@gmail.com", @@ -1188,12 +1284,6 @@ "givenName":"Dmitrii", "familyName": "Altukhov" }, - { - "@type":"Person", - "email":"dom.mak19@gmail.com", - "givenName":"Dominique", - "familyName": "Makowski" - }, { "@type":"Person", "email":"e.eich@fz-juelich.de", @@ -1242,6 +1332,12 @@ "givenName":"Federico", "familyName": "Zamberlan" }, + { + "@type":"Person", + "email":"", + "givenName":"Frederik D", + "familyName": "Weber" + }, { "@type":"Person", "email":"", @@ -1254,6 +1350,12 @@ "givenName":"Geoff", "familyName": "Brookshire" }, + { + "@type":"Person", + "email":"", + "givenName":"Hamid", + "familyName": "Maymandi" + }, { "@type":"Person", "email":"hermann.sonntag@gmail.com", @@ -1266,6 +1368,12 @@ "givenName":"Hongjiang", "familyName": "Ye" }, + { + "@type":"Person", + "email":"", + "givenName":"Ilias", + "familyName": "Machairas" + }, { "@type":"Person", "email":"", @@ -1320,18 +1428,6 @@ "givenName":"Joshua J", "familyName": "Bear" }, - { - "@type":"Person", - "email":"jbtevespro@gmail.com", - "givenName":"Joshua", - "familyName": "Teves" - }, - { - "@type":"Person", - "email":"joshua.teves@nih.gov", - "givenName":"Joshua", - "familyName": "Teves" - }, { "@type":"Person", "email":"", @@ -1392,6 +1488,12 @@ "givenName":"Lorenzo", "familyName": "Alfine" }, + { + "@type":"Person", + "email":"", + "givenName":"Lukas", + "familyName": "Gemein" + }, { "@type":"Person", "email":"", @@ -1434,18 +1536,6 @@ "givenName":"Marcin", "familyName": "Koculak" }, - { - "@type":"Person", - "email":"mdovgialo@fabrizzio.zfb.fuw.edu.pl", - "givenName":"Marian", - "familyName": "Dovgialo" - }, - { - "@type":"Person", - "email":"", - "givenName":"Marian", - "familyName": "Dovgialo" - }, { "@type":"Person", "email":"", @@ -1458,6 +1548,12 @@ "givenName":"", "familyName": "MartinBaBer" }, + { + "@type":"Person", + "email":"", + "givenName":"Matt", + "familyName": "Courtemanche" + }, { "@type":"Person", "email":"matt.tucker@nyu.edu", @@ -1470,6 +1566,24 @@ "givenName":"Matteo", "familyName": "Visconti di Oleggio Castello" }, + { + "@type":"Person", + "email":"", + "givenName":"Matthias", + "familyName": "Dold" + }, + { + "@type":"Person", + "email":"", + "givenName":"Matti", + "familyName": "Toivonen" + }, + { + "@type":"Person", + "email":"", + "givenName":"Maureen", + "familyName": "Shader" + }, { "@type":"Person", "email":"krause@mpib-berlin.mpg.de", @@ -1482,6 +1596,12 @@ "givenName":"Milan", "familyName": "Rybář" }, + { + "@type":"Person", + "email":"", + "givenName":"Mingjian", + "familyName": "He" + }, { "@type":"Person", "email":"", @@ -1500,12 +1620,6 @@ "givenName":"Nicole", "familyName": "Proulx" }, - { - "@type":"Person", - "email":"", - "givenName":"Nikolai", - "familyName": "Chapochnikov" - }, { "@type":"Person", "email":"nikos.ch01@gmail.com", @@ -1562,9 +1676,9 @@ }, { "@type":"Person", - "email":"r.shoorangiz@live.com", + "email":"reza@ddpo.ir", "givenName":"Reza", - "familyName": "Shoorangiz" + "familyName": "Nasri" }, { "@type":"Person", @@ -1614,12 +1728,6 @@ "givenName":"Sam", "familyName": "Perry" }, - { - "@type":"Person", - "email":"", - "givenName":"Scott", - "familyName": "Huberty" - }, { "@type":"Person", "email":"", @@ -1662,6 +1770,12 @@ "givenName":"Simon-Shlomo", "familyName": "Poil" }, + { + "@type":"Person", + "email":"sondre.foslien@gmail.com", + "givenName":"Sondre", + "familyName": "Foslien" + }, { "@type":"Person", "email":"", @@ -1692,6 +1806,12 @@ "givenName":"Svea Marie", "familyName": "Meyer" }, + { + "@type":"Person", + "email":"", + "givenName":"T", + "familyName": "Wang" + }, { "@type":"Person", "email":"Theodore.Papadopoulo@inria.fr", @@ -1745,18 +1865,6 @@ "email":"", "givenName":"", "familyName": "buildqa" - }, - { - "@type":"Person", - "email":"", - "givenName":"", - "familyName": "chapochn" - }, - { - "@type":"Person", - "email":"", - "givenName":"", - "familyName": "mshader" } ] } diff --git a/doc/_static/versions.json b/doc/_static/versions.json index ec240710e1b..55cbc1476fa 100644 --- a/doc/_static/versions.json +++ b/doc/_static/versions.json @@ -1,14 +1,18 @@ [ { - "name": "1.1 (devel)", + "name": "1.2 (devel)", "version": "dev", "url": "https://mne.tools/dev/" }, { - "name": "1.0 (stable)", + "name": "1.1 (stable)", "version": "stable", "url": "https://mne.tools/stable/" }, + { + "version": "1.0", + "url": "https://mne.tools/1.0/" + }, { "version": "0.24", "url": "https://mne.tools/0.24/" diff --git a/doc/changes/latest.inc b/doc/changes/1.1.inc similarity index 95% rename from doc/changes/latest.inc rename to doc/changes/1.1.inc index c0fc5955cc3..fcb2be19823 100644 --- a/doc/changes/latest.inc +++ b/doc/changes/1.1.inc @@ -16,10 +16,10 @@ Also add a corresponding entry for yourself in doc/changes/names.inc -.. _current: +.. _changes_1_1_0: -Current (1.1.dev0) ------------------- +Version 1.1.0 (2022-08-03) +-------------------------- Enhancements ~~~~~~~~~~~~ @@ -234,3 +234,56 @@ API and behavior changes - The ``to_data_frame`` methods for :meth:`Raw `, :meth:`Epochs `, :meth:`Evoked `, :meth:`SourceEstimate `, :meth:`EpochsTFR `, and :meth:`AverageTFR ` all now have default ``time_format=None`` (keep time in seconds) instead of ``time_format='ms'`` (convert time to milliseconds) (:gh:`10925` by `Daniel McCloy`_) - :func:`mne.Evoked.decimate` now aligns to the sample at time=0 (so that the exact sample when the event occurred is preserved) to be consistent with :func:`mne.Epochs.decimate` (:gh:`10945` by `Alex Rockhill`_) + +Authors +~~~~~~~ + +* Adam Li +* Adeline Fecker+ +* Alessandro Tonin+ +* Alex Ciok+ +* Alex Rockhill +* Alexandre Gramfort +* Archit Singhal+ +* Ashley Drew+ +* Ben Beasley+ +* Carina Forster+ +* Christian O'Reilly +* Clemens Brunner +* Cora Kim +* Daniel McCloy +* Dominik Welke +* Dominique Makowski +* Eric Larson +* Evan Hathaway +* Frederik D. Weber+ +* Guillaume Favelier +* Hamid Maymandi+ +* Ilias Machairas+ +* Jean-Remi King +* Johann Benerradi +* Jon Houck +* Jona Sassenhagen +* Jordan Drew+ +* Lukas Gemein+ +* Marijn van Vliet +* Martin Schulz +* Mathieu Scheltienne +* Matt Courtemanche+ +* Matthias Dold+ +* Matti Toivonen+ +* Michiru Kaneda+ +* Mikołaj Magnuski +* Mingjian He+ +* Naveen Srinivasan+ +* Phillip Alday +* Reza Nasri+ +* Reza Shoorangiz +* Richard Höchenberger +* Rob Luke +* Scott Huberty+ +* Simon Kern +* Sondre Foslien+ +* Stefan Appelhoff +* T. Wang+ +* Tziona NessAiver+ diff --git a/doc/changes/names.inc b/doc/changes/names.inc index 66070914262..c5216a17820 100644 --- a/doc/changes/names.inc +++ b/doc/changes/names.inc @@ -1,467 +1,485 @@ -.. _Alex Gramfort: http://alexandre.gramfort.net +.. _Abram Hindle: http://softwareprocess.es -.. _Martin Luessi: https://github.com/mluessi +.. _Adam Li: http://github.com/adam2392 -.. _Yaroslav Halchenko: http://www.onerussian.com/ +.. _Adeline Fecker: https://github.com/adelinefecker -.. _Daniel Strohmeier: https://github.com/joewalter +.. _Adina Wagner: https://github.com/adswa -.. _Eric Larson: http://larsoner.com +.. _Adonay Nunes: https://github.com/AdoNunes -.. _Denis Engemann: http://denis-engemann.de +.. _Alan Leggitt: https://github.com/leggitta -.. _Christian Brodbeck: https://github.com/christianbrodbeck +.. _Alejandro Weinstein: http://ocam.cl -.. _Simon Kornblith: http://simonster.com +.. _Alessandro Tonin: https://wysscenter.ch/team/alessandro-tonin -.. _Teon Brooks: https://teonbrooks.com +.. _Alex Ciok: https://github.com/alexCiok -.. _Mainak Jas: https://jasmainak.github.io +.. _Alex Gramfort: http://alexandre.gramfort.net -.. _Roman Goj: http://romanmne.blogspot.co.uk +.. _Alex Rockhill: https://github.com/alexrockhill/ -.. _Andrew Dykstra: https://github.com/adykstra +.. _Alexander Rudiuk: https://github.com/ARudiuk -.. _Romain Trachel: https://fr.linkedin.com/in/trachelr +.. _Alexandre Barachant: http://alexandre.barachant.org -.. _Christopher Dinh: https://github.com/chdinh +.. _Andrea Brovelli: https://andrea-brovelli.net -.. _Nick Ward: http://www.ucl.ac.uk/ion/departments/sobell/Research/NWard +.. _Andreas Hojlund: https://github.com/ahoejlund -.. _Tal Linzen: http://tallinzen.net/ +.. _Andres Rodriguez: https://github.com/infinitejest/ -.. _Roan LaPlante: https://github.com/aestrivex +.. _Andrew Dykstra: https://github.com/adykstra -.. _Mads Jensen: https://github.com/MadsJensen +.. _Aniket Pradhan: https://github.com/Aniket-Pradhan -.. _Dan Wakeman: https://github.com/dgwakeman +.. _Anna Padee: https://github.com/apadee/ -.. _Qunxi Dong: https://github.com/dongqunxi +.. _Annalisa Pascarella: http://www.iac.rm.cnr.it/~pasca/ -.. _Martin Billinger: https://github.com/mbillingr +.. _Anne-Sophie Dubarry: https://github.com/annesodub -.. _Federico Raimondo: https://github.com/fraimondo +.. _Antoine Gauthier: https://github.com/Okamille -.. _Cathy Nangini: https://github.com/KatiRG +.. _Antti Rantala: https://github.com/Odingod -.. _Jean-Remi King: https://github.com/kingjr +.. _Apoorva Karekal: https://github.com/apoorva6262 -.. _Juergen Dammers: https://github.com/jdammers +.. _Archit Singhal: https://github.com/architsinghal-mriirs -.. _Olaf Hauk: http://www.neuroscience.cam.ac.uk/directory/profile.php?olafhauk +.. _Ashley Drew: https://github.com/ashdrew -.. _Lukas Breuer: https://www.researchgate.net/profile/Lukas-Breuer-2 +.. _Asish Panda: https://github.com/kaichogami -.. _Alan Leggitt: https://github.com/leggitta +.. _Austin Hurst: https://github.com/a-hurst -.. _Marijn van Vliet: https://github.com/wmvanvliet +.. _Ben Beasley: https://github.com/musicinmybrain -.. _Marmaduke Woodman: https://github.com/maedoc +.. _Britta Westner: https://github.com/britta-wstnr -.. _Jona Sassenhagen: https://github.com/jona-sassenhagen +.. _Bruno Nicenboim: https://bnicenboim.github.io -.. _Hari Bharadwaj: http://www.haribharadwaj.com +.. _buildqa: https://github.com/buildqa + +.. _Carina Forster: https://github.com/carinafo + +.. _Cathy Nangini: https://github.com/KatiRG + +.. _Chris Bailey: https://github.com/cjayb .. _Chris Holdgraf: https://chrisholdgraf.com -.. _Jaakko Leppakangas: https://github.com/jaeilepp +.. _Chris Mullins: http://crmullins.com -.. _Yousra Bekhti: https://www.linkedin.com/pub/yousra-bekhti/56/886/421 +.. _Christian Brodbeck: https://github.com/christianbrodbeck -.. _Mark Wronkiewicz: https://ml.jpl.nasa.gov/people/wronkiewicz/wronkiewicz.html +.. _Christian O'Reilly: https://github.com/christian-oreilly -.. _Sébastien Marti: https://www.researchgate.net/profile/Sebastien-Marti +.. _Christopher Dinh: https://github.com/chdinh -.. _Chris Bailey: https://github.com/cjayb +.. _Chun-Hui Li: https://github.com/iamsc -.. _Ross Maddox: https://www.urmc.rochester.edu/labs/maddox-lab.aspx +.. _Clemens Brunner: https://github.com/cbrnr -.. _Alexandre Barachant: http://alexandre.barachant.org +.. _Cora Kim: https://github.com/kimcoco -.. _Daniel McCloy: http://dan.mccloy.info +.. _Cristóbal Moënne-Loccoz: https://github.com/cmmoenne -.. _Jair Montoya Martinez: https://github.com/jmontoyam +.. _Dan Wakeman: https://github.com/dgwakeman -.. _Samu Taulu: https://phys.washington.edu/people/samu-taulu +.. _Daniel McCloy: http://dan.mccloy.info -.. _Lorenzo Desantis: https://github.com/lorenzo-desantis/ +.. _Daniel Strohmeier: https://github.com/joewalter -.. _Jukka Nenonen: https://www.linkedin.com/pub/jukka-nenonen/28/b5a/684 +.. _Darin Erat Sleiter: 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Kornblith: http://simonster.com -.. _Jan Zerfowski: https://github.com/jzerfowski +.. _Sondre Foslien: https://github.com/sondrfos -.. _Adina Wagner: https://github.com/adswa +.. _Sophie Herbst: https://github.com/SophieHerbst -.. _Senwen Deng: https://snwn.de +.. _Stanislas Chambon: https://github.com/Slasnista -.. _Alessandro Tonin: https://wysscenter.ch/team/alessandro-tonin +.. _Stefan Appelhoff: http://stefanappelhoff.com -.. _Michiru Kaneda: https://github.com/rcmdnk +.. _Stefan Repplinger: https://github.com/stfnrpplngr -.. _Scott Huberty: https://orcid.org/0000-0003-2637-031X +.. _Steven Bethard: https://github.com/bethard -.. _Etienne de Montalivet: https://github.com/etiennedemontalivet +.. _Steven Bierer: https://github.com/neurolaunch -.. _Federico Zamberlan: https://github.com/fzamberlan +.. _Steven Gutstein: https://github.com/smgutstein -.. _John Veillette: https://psychology.uchicago.edu/directory/john-veillette +.. _Sumalyo Datta: https://github.com/Sumalyo -.. _Nikolai Chapochnikov: https://github.com/chapochn +.. _Susanna Aro: https://www.linkedin.com/in/susanna-aro -.. _Matthias Dold: https://matthiasdold.de +.. _Svea Marie Meyer: https://github.com/SveaMeyer13 .. _T. Wang: https://github.com/twang5 -.. _Samuel Powell: https://github.com/samuelpowell +.. _Tal Linzen: http://tallinzen.net/ -.. _Matt Courtemanche: https://github.com/mjcourte +.. _Teon Brooks: https://teonbrooks.com -.. _Matti Toivonen: https://github.com/mattitoi +.. _Theodore Papadopoulo: https://github.com/papadop -.. _Simon Kern: https://github.com/skjerns +.. _Thomas Hartmann: https://github.com/thht -.. _Jordan Drew: https://github.com/jadrew43 +.. _Thomas Radman: https://github.com/tradman -.. _Lukas Gemein: https://github.com/gemeinl +.. _Timothy Gates: https://au.linkedin.com/in/tim-gates-0528a4199 -.. _Frederik Weber: https://github.com/Frederik-D-Weber +.. _Tod Flak: https://github.com/todflak -.. _Mingjian He: https://github.com/mh105 +.. _Tommy Clausner: https://github.com/TommyClausner -.. _Reza Nasri: https://github.com/0reza +.. _Tristan Stenner: https://github.com/tstenner/ .. _Tziona NessAiver: https://github.com/TzionaN -.. _Ilias Machairas: https://github.com/JungleHippo +.. _Valerii Chirkov: https://github.com/vagechirkov + +.. _Victor Ferat: https://github.com/vferat + +.. _Victoria Peterson: https://github.com/vpeterson + +.. _Xiaokai Xia: https://github.com/dddd1007 + +.. _Yaroslav Halchenko: http://www.onerussian.com/ + +.. _Yousra Bekhti: https://www.linkedin.com/pub/yousra-bekhti/56/886/421 + +.. _Yu-Han Luo: https://github.com/yh-luo + +.. _Zhi Zhang: https://github.com/tczhangzhi/ diff --git a/doc/cited.rst b/doc/cited.rst index fd7235d36b6..ed9f1797fc9 100644 --- a/doc/cited.rst +++ b/doc/cited.rst @@ -3,7 +3,7 @@ Papers citing MNE-Python ======================== -Estimates provided by Google Scholar as of 02 November 2021: +Estimates provided by Google Scholar as of 02 August 2022: -- `MNE (1180) `_ -- `MNE-Python (1230) `_ +- `MNE (1270) `_ +- `MNE-Python (1420) `_ diff --git a/doc/whats_new.rst b/doc/whats_new.rst index 1d805449aaa..c10ebb1a3e5 100644 --- a/doc/whats_new.rst +++ b/doc/whats_new.rst @@ -5,7 +5,7 @@ What's new .. currentmodule:: mne -.. include:: changes/latest.inc +.. include:: changes/1.1.inc .. include:: changes/1.0.inc .. include:: changes/0.24.inc .. include:: changes/0.23.inc diff --git a/mne/_version.py b/mne/_version.py index 12f0028b85a..55e6fa2edd0 100644 --- a/mne/_version.py +++ b/mne/_version.py @@ -3,4 +3,4 @@ # # License: BSD-3-Clause -__version__ = '1.1.dev0' +__version__ = '1.1.0' diff --git a/tools/circleci_download.sh b/tools/circleci_download.sh index ac194179f9e..e6db25c80dd 100755 --- a/tools/circleci_download.sh +++ b/tools/circleci_download.sh @@ -4,7 +4,7 @@ if [ "$CIRCLE_BRANCH" == "main" ] || [[ $(cat gitlog.txt) == *"[circle full]"* ] echo "Doing a full dev build"; echo html_dev-memory > build.txt; python -c "import mne; mne.datasets._download_all_example_data()"; -elif [ "$CIRCLE_BRANCH" == "maint/1.0" ]; then +elif [ "$CIRCLE_BRANCH" == "maint/1.1" ]; then echo "Doing a full stable build"; echo html_stable-memory > build.txt; python -c "import mne; mne.datasets._download_all_example_data()";