Releases: mikolmogorov/Flye
Releases · mikolmogorov/Flye
Flye 2.3.4
- A fix for assemblies with low reads count
- Polishing of large genomes is now 2-3x faster and requires less memory
Flye 2.3.3
- Automatic selection of minimum overlap parameter based on read length
- Fixed bug causing deletion of edges with very high coverage
- Minimap2 updated
- Other bugfixes
Flye 2.3.2
- Better contiguity for larger genome assemblies
- Improvements in corrected reads mode
- Various bugfixes
Flye 2.3.1
- Minor release with a few bugs fixed
Flye 2.3
- ABruijn 2.x branch has been renamed to Flye, highlighting many substantial algorithmic changes
- Stable version of the repeat analysis module
- New command-line syntax (fallback mode with the old syntax is available)
- New --subassemblies mode for generating consensus of multiple assemblies
- Improved preformance and reduced memory footprint (now scales to human genome)
- Corrected reads are now supported
- Extra output with information about the contigs (coverage, multiplicity, graph paths etc.)
- Gzipped Fasta/q support
- Multiple read files support
- Various bugfixes
ABruijn 2.2 beta
- Various bug fixes and improvements
- More accurate assembly graph construction
- Support for very long (100kb+) reads
- Fastq input
ABruijn 2.1 beta
- Various bug fixes and performance improvements
ABruijn 2.0 beta
- A new repeat graph analysis module for more complete and accurate assembly
- ABruijn now outputs a graph representation of the final assembly
- Significant improvements in performance and reduced memory footprint
- Various bugfixes
ABruijn v1.0
First stable release.