STAR does not have any command line help

[GoogleCodeExporter]

The STAR command is not very helpful. This will annoy potential users. 
Especially as the documentation is a PDF, and the src/ distribution doesn't 
even include it. An ASCII README for basic usage and some pointers to the 
documentation.

% STAR

EXITING because of fatal input ERROR: could not open readInFile=Read1

% STAR -h
% STAR --help

EXITING: FATAL INPUT ERROR: empty value for paramter "-h" in input 
"Command-Line-Initial"
SOLUTION: use non-empty value for this parameter

Original issue reported on code.google.com by [email protected] on 6 Jun 2013 at 6:10

[GoogleCodeExporter]

Thanks for this suggestion, I will include some help info in the next release.

Original comment by [email protected] on 8 Jun 2013 at 2:34