diff --git a/README.md b/README.md index 535797f..038b4d5 100644 --- a/README.md +++ b/README.md @@ -9,7 +9,7 @@ Simple peak caller for CUT&TAG data Download the latest release binary specific for your operating system: ``` -wget -O gopeaks https://github.com/maxsonBraunLab/gopeaks/releases/download/v0.1.5/gopeaks-linux-amd64 +wget -O gopeaks https://github.com/maxsonBraunLab/gopeaks/releases/download/v0.1.7/gopeaks-linux-amd64 chmod +x gopeaks ``` @@ -19,7 +19,7 @@ chmod +x gopeaks ./gopeaks -h Usage of ./gopeaks: -bam string - Bam file with + Bam file with -control string Bam file with contriol signal to be subtracted -cs string @@ -27,7 +27,7 @@ Usage of ./gopeaks: -mdist int Merge distance for nearby peaks (default 150) -minwidth int - Minimum width to be considered a peak (default 250) + Minimum width to be considered a peak (default 150) -mr int Min reads per coverage bin to be considered (default 15) -of string @@ -40,6 +40,7 @@ Usage of ./gopeaks: Bin size for coverage bins (default 100) ``` + ## call peaks on a bam file using an IgG control ```