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strange spectra asm #146

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amara86 opened this issue Nov 20, 2024 · 0 comments
Open

strange spectra asm #146

amara86 opened this issue Nov 20, 2024 · 0 comments

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@amara86
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amara86 commented Nov 20, 2024

Hi
I am getting this strange plot after running merqury for one of my samples. I have generated haplotype resolved assemblies and executed merqury using raw HiFi reads, the two haplotypes, and the two parental genomes. The genomescope has underestimated the genome size, however, the assemblies produced are double the size (hap1) and triple the size (hap2) of the estimated size. How to interpret this strange plot:
mabs_5507 spectra-asm fl
Regards,
Amara

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