Updating water vapour branch #15

malininae · 2023-07-06T21:17:39Z

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Closes #issue_number
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New or updated recipe/diagnostic

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🧪 Figure(s) and data look as expected from literature
🛠 Provenance information has been added

New or updated data reformatting script

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* update merra2 config file * make error more user firndly * implement cube operations * add a couple errors prints * appease god Flake * added test * add to test * actually raise stuff when selections are empty * add raw and component raw vars to attributes * improve testing * 87 purrcent coverage babay * adding extra vars given by Jerry * run a GA set of tests * deactivate logger warning suppression * turn off GA testing * update OBS table in dox * added alternative source for data * added Jerry as author * update zenodo file * fix codacy issues * put back old varname fool annoying Codacy * add extra possible attributes * add encoding type at yaml load point * fix codacy issue * add to test module * added variables * update file with new server and a bit more instructions * update obs check recipe with dunkload of new variables for MERRA2 * set current upper limit to 2022 * fix vertical levels * add height10m func attr for module * fix missing hight2m and height10m * fix file patterns so all data can be found * add missing downlod dir for tasmin tasmax * fixed the peculiar uv alevel case * add to test module cover what Ive implemented earlier * Update esmvaltool/cmorizers/data/formatters/datasets/merra2.py Co-authored-by: Rémi Kazeroni <[email protected]> * Update esmvaltool/recipes/examples/recipe_check_obs.yml Co-authored-by: Rémi Kazeroni <[email protected]> * Update esmvaltool/recipes/examples/recipe_check_obs.yml Co-authored-by: Rémi Kazeroni <[email protected]> * Update esmvaltool/cmorizers/data/cmor_config/MERRA2.yml Co-authored-by: Rémi Kazeroni <[email protected]> * Update input.rst * Update esmvaltool/cmorizers/data/formatters/datasets/merra2.py Co-authored-by: Rémi Kazeroni <[email protected]> * reinstate main branch zenodo file Co-authored-by: Remi Kazeroni <[email protected]> Co-authored-by: Rémi Kazeroni <[email protected]>

* Fixed wrong latitudes in NDP CMORizer * Fixed wrong latitudes

…t fails doc builds (ESMValGroup#2830) * pin matplotlib * pin matplotlib * pin matplotlib

…2813) update mo site specific obs4MIPs paths

…e_change_hotspot.yml (ESMValGroup#2823) * Rename figure that had Windows incompatible filename * Remove unused figures from documentation * Save figures titles with "-" instead of ":" Co-authored-by: jcos <[email protected]>

… idx, idx)` (ESMValGroup#2838) fix indexer to modern numpy

Updating Linux condalock file Co-authored-by: valeriupredoi <[email protected]>

…ibrate_sigmas.py (ESMValGroup#2848) replace xarray ufuncs with bogstandard numpy

…2801) Update documentation for the Landscuetzer 2016 recipe. The observational dataset "spco2" has been replaced by an updated version, and the original dataset is no longer available. This commit updates the documentation according to the current cmor_config/Landschuetzer2016.yml file.

* fix units of clt and fix variable va Co-authored-by: Valeriu Predoi <[email protected]>

…lGroup#2854) * Remove missing ESGF datasets * Finish removing

…p#2860) * up esmvalcore version to 2.7 since we released yesterday * up esmvalcore version to 2.7 since we released yesterday * run a GA test just to be sure * turn of GA test on feature branch

* fixed anaconda badge * add cf repo

Co-authored-by: Bouwe Andela <[email protected]> Co-authored-by: Valeriu Predoi <[email protected]>

…ons (ESMValGroup#2730) * added docs on multiple dataset versions * fixed typos * added link * Apply suggestions from code review Co-authored-by: Axel Lauer <[email protected]> * fix title underline * improved formatting Co-authored-by: Axel Lauer <[email protected]>

…#2862) * Fix bug when using log-scale y-axis for ocean transects. Using `plt.axes().set_ylogscale('log')` creates a new axes on top of the original figure. Replace with `plt.gca().set_yscale('log')` to adjust the existing figure axes to log scale. * dummy docstring trigger CI Co-authored-by: Valeriu Predoi <[email protected]>

…_extrapolate` (ESMValGroup#2841) replace with new regrid scheme

Updating Linux condalock file Co-authored-by: valeriupredoi <[email protected]>

…MValGroup#2719) * Create maintainer.rst * Added "maintaining a recipe" to index.rst * Update index.rst * Update maintainer.rst * Update maintainer.rst * Update maintainer.rst * Update maintainer.rst * Update maintainer.rst * Update maintainer.rst * Update maintainer.rst * Update doc/sphinx/source/community/maintainer.rst Co-authored-by: Bettina Gier <[email protected]> * Update doc/sphinx/source/community/maintainer.rst Co-authored-by: Bettina Gier <[email protected]> * Update doc/sphinx/source/community/maintainer.rst Co-authored-by: Rémi Kazeroni <[email protected]> * Update doc/sphinx/source/community/maintainer.rst Co-authored-by: Rémi Kazeroni <[email protected]> * Update doc/sphinx/source/community/maintainer.rst Co-authored-by: Rémi Kazeroni <[email protected]> * Update maintainer.rst * Update maintainer.rst * fixed typo Co-authored-by: Bouwe Andela <[email protected]> * Update maintainer.rst * Extending documentation: broken recipe policy (ESMValGroup#2720) Co-authored-by: Valeriu Predoi <[email protected]> Co-authored-by: Manuel Schlund <[email protected]> * Update doc/sphinx/source/community/maintainer.rst Co-authored-by: Pep Cos <[email protected]> * Add links Co-authored-by: Bettina Gier <[email protected]> Co-authored-by: Rémi Kazeroni <[email protected]> Co-authored-by: Bouwe Andela <[email protected]> Co-authored-by: Valeriu Predoi <[email protected]> Co-authored-by: Manuel Schlund <[email protected]> Co-authored-by: Pep Cos <[email protected]>

* Add iris-esmf-regrid as a dependency * Activate github tests * Dectivate github tests

* added guff for 270 * remove todo * bleh piratical string * fix broken link to Tebaldy paper add recipe link to it and missing two PRs * move pin on matplotlib from Documentation to Bugs * removed MO RTW PRs * remove one more RTW PR and 2720

Updating Linux condalock file Co-authored-by: valeriupredoi <[email protected]>

Co-authored-by: Valeriu Predoi <[email protected]>

Co-authored-by: Manuel Schlund <[email protected]> Co-authored-by: Valeriu Predoi <[email protected]> Co-authored-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com> Co-authored-by: valeriupredoi <[email protected]> Co-authored-by: Manuel Schlund <[email protected]>

…nstall in development installation test (ESMValGroup#3213) Co-authored-by: Bouwe Andela <[email protected]>

…ValGroup#3220)

Co-authored-by: Rémi Kazeroni <[email protected]>

Co-authored-by: Valeriu Predoi <[email protected]> Co-authored-by: Rémi Kazeroni <[email protected]>

Co-authored-by: valeriupredoi <[email protected]>

Co-authored-by: Manuel Schlund <[email protected]>

…lGroup#3167)

ESMValGroup#3222)

…ml (ESMValGroup#2991)

Co-authored-by: Rémi Kazeroni <[email protected]>

…p#3021) Co-authored-by: Evgenia Galytska <[email protected]> Co-authored-by: Evgenia Galytska <[email protected]> Co-authored-by: Evgenia Galytska <[email protected]> Co-authored-by: Brei Soliño <[email protected]> Co-authored-by: Breixo Soliño <[email protected]> Co-authored-by: Rémi Kazeroni <[email protected]> Co-authored-by: Lisa Bock <[email protected]>

…roup#3197) Co-authored-by: Bouwe Andela <[email protected]>

)

Co-authored-by: valeriupredoi <[email protected]>

…'t use it (ESMValGroup#3251)

Update pre 2.9

…ue from dask latest (2023.6.0) (ESMValGroup#3265)

…tag (ESMValGroup#3273) Co-authored-by: Bouwe Andela <[email protected]> Co-authored-by: Valeriu Predoi <[email protected]>

…nce reasons (ESMValGroup#3270)

Co-authored-by: Valeriu Predoi <[email protected]> Co-authored-by: Rémi Kazeroni <[email protected]>

Update to 2.9 release

valeriupredoi and others added 30 commits October 4, 2022 17:00

Fixed wrong latitudes in NDP CMORizer (ESMValGroup#2832)

c56428d

* Fixed wrong latitudes in NDP CMORizer * Fixed wrong latitudes

Pin matplotlib-base<3.6.0 to avoid conflict from mapgenerator tha…

de5c557

…t fails doc builds (ESMValGroup#2830) * pin matplotlib * pin matplotlib * pin matplotlib

Fixed broken link for monthly meetings (ESMValGroup#2806)

d67068b

Update MO obs4MIPs paths in the user configuration file (ESMValGroup#…

7288fca

…2813) update mo site specific obs4MIPs paths

fix indexer in Autoassess supermeans module use a tuple of `(slice(),…

93c9792

… idx, idx)` (ESMValGroup#2838) fix indexer to modern numpy

[Condalock] Update Linux condalock file (ESMValGroup#2843)

c1f1068

Updating Linux condalock file Co-authored-by: valeriupredoi <[email protected]>

replace xarray ufuncs with bogstandard numpy in weighting/climwip/cal…

221e222

…ibrate_sigmas.py (ESMValGroup#2848) replace xarray ufuncs with bogstandard numpy

Fix units MERRA2 CMORizer (ESMValGroup#2850)

b49e033

* fix units of clt and fix variable va Co-authored-by: Valeriu Predoi <[email protected]>

Remove retracted datasets from recipe_climate_change_hotspot (ESMVa…

e0d427a

…lGroup#2854) * Remove missing ESGF datasets * Finish removing

Increase esmvalcore version to 2.7.0 in environment files (ESMValGrou…

00b237d

…p#2860) * up esmvalcore version to 2.7 since we released yesterday * up esmvalcore version to 2.7 since we released yesterday * run a GA test just to be sure * turn of GA test on feature branch

run GA tests all through release process

6330d18

fixed anaconda badge in README (ESMValGroup#2866)

58748b4

* fixed anaconda badge * add cf repo

Update the instructions for making a release(ESMValGroup#2734)

bb08f4b

Co-authored-by: Bouwe Andela <[email protected]> Co-authored-by: Valeriu Predoi <[email protected]>

recipe recipe_esacci_oc.yml replace with new regrid scheme `nearest…

3e8a99b

…_extrapolate` (ESMValGroup#2841) replace with new regrid scheme

Merge branch 'main' into release_270stable

4f237da

[Condalock] Update Linux condalock file (ESMValGroup#2875)

b6fb9bf

Updating Linux condalock file Co-authored-by: valeriupredoi <[email protected]>

Add iris-esmf-regrid as a dependency (ESMValGroup#2880)

c9d8580

* Add iris-esmf-regrid as a dependency * Activate github tests * Dectivate github tests

Merge branch 'main' into release_270stable

5eb50b1

Merge branch 'main' into release_270stable

39c1ce4

deactivate ga test on release branch

b7ff181

up version to 270 in CITATION

97e395e

[Condalock] Update Linux condalock file (ESMValGroup#2899)

d91219c

Updating Linux condalock file Co-authored-by: valeriupredoi <[email protected]>

Set the version number to v2.7 (merge pull request ESMValGroup#2896)

0fbb3ce

bouweandela and others added 29 commits June 6, 2023 15:44

Add support for using a dask distributed scheduler (ESMValGroup#3151)

ab4c1da

Co-authored-by: Valeriu Predoi <[email protected]>

[Github Actions ] Check if python minor version changed after Julia i…

227e532

…nstall in development installation test (ESMValGroup#3213) Co-authored-by: Bouwe Andela <[email protected]>

Use ESMValCore v2.9.0 release candidates (ESMValGroup#3219)

6ae4ae0

Update recipe_impact.yml to work with newer versions of pandas (ESM…

589d189

…ValGroup#3220)

Remove "fx_variable" from recipe_tebaldi21esd.yml (ESMValGroup#3211)

248c5e2

Remove fx_variables from ipccwg1ar5ch9 recipes (ESMValGroup#3215)

cf517e1

Co-authored-by: Rémi Kazeroni <[email protected]>

Add Seaborn diagnostic (ESMValGroup#3155)

548074f

Co-authored-by: Valeriu Predoi <[email protected]> Co-authored-by: Rémi Kazeroni <[email protected]>

[Condalock] Update Linux condalock file (ESMValGroup#3217)

6a7531e

Co-authored-by: valeriupredoi <[email protected]>

Remove "fx_variable" from recipe_wenzel14jgr.yml (ESMValGroup#3212)

14d45d9

Co-authored-by: Manuel Schlund <[email protected]>

Extension of NASA MERRA2 CMORizer (cl, cli, clivi, clw, clwvi) (ESMVa…

e17d1c8

…lGroup#3167)

Add variable long names to provenance record in monitoring diagnostics (

81fbf42

ESMValGroup#3222)

Update obs4MIPs dataset to the current naming scheme in recipe_smpi.y…

2b34d9f

…ml (ESMValGroup#2991)

Fixed pandas diagnostics for pandas>=2.0.0 (ESMValGroup#3209)

5c6ccd5

Co-authored-by: Rémi Kazeroni <[email protected]>

Generate climatology on the fly for AutoAssess soil moisture (ESMValG…

be55fec

…roup#3197) Co-authored-by: Bouwe Andela <[email protected]>

Add ESMValCore release v2.8.1 into the documentation (ESMValGroup#3235

909ea47

)

Modified links to the tutorial (ESMValGroup#3236)

2dbc2cf

[Condalock] Update Linux condalock file (ESMValGroup#3237)

d7b3c1f

Co-authored-by: valeriupredoi <[email protected]>

Remove jquery sphinx extension from docs config since new theme doesn…

da7f3db

…'t use it (ESMValGroup#3251)

Fix gitter badge in README (ESMValGroup#3258)

abaedeb

Merge pull request #13 from ESMValGroup/main

8efba12

Update pre 2.9

Realize data for scalar cube in recipe_carvalhais14nat to avert iss…

776135a

…ue from dask latest (2023.6.0) (ESMValGroup#3265)

Fix failing mlr diagnostic test by adding new scikit-learn default …

e1a06dd

…tag (ESMValGroup#3273) Co-authored-by: Bouwe Andela <[email protected]> Co-authored-by: Valeriu Predoi <[email protected]>

Relax the pin on iris to allow the use of older versions for performa…

28ad6b4

…nce reasons (ESMValGroup#3270)

Use ESMValCore v2.9.0 (ESMValGroup#3274)

c694d4c

Fix ordering of models in perfmetrics (ESMValGroup#3275)

dfc7884

Add release notes for v2.9 (ESMValGroup#3266)

7e0c5a5

Co-authored-by: Valeriu Predoi <[email protected]> Co-authored-by: Rémi Kazeroni <[email protected]>

Merge pull request #14 from ESMValGroup/main

c7afe54

Update to 2.9 release

malininae merged commit 1cfd437 into water_vapor_carsten Jul 6, 2023

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Updating water vapour branch #15

Updating water vapour branch #15

malininae commented Jul 6, 2023

Updating water vapour branch #15

Updating water vapour branch #15

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malininae commented Jul 6, 2023

Description

Before you get started

Checklist

New or updated recipe/diagnostic

New or updated data reformatting script