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Transcriptional_model

Setting your environment up

  1. Create virtualenv for python3 and activate. (Ensure you have python3 installed):
python3 -m virtualenv tm-env
source tm-env/bin/activate

Remember type deactivate if you want to run out of this virtualenv.

  1. First clone this repo:
git clone https://github.com/macperez/transcriptional_model.git
  1. Go into the proyect in your local path:
cd transcriptional_model
  1. Install dependencies:
pip install -r requirements.txt

  1. Pick up of your email (with subjet transcriptional-model-key.json) a copy of Google Drive key and save it as transcriptional-model-key.json. Put inside of transcriptional_model folder (where the python's scripts are).

  2. Execute the main script:

python calculate_params.py