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Nextflow hackathon 2018 Programme

Thursday, 22 November

8.30 - 9.00 Registration
9.00 - 11.00 Nextflow for beginners (1)
11.00 - 11.30 Coffee break
11.30 - 13.00 Nextflow for beginners (2)
13.00 - 14.15 Lunch
14.15 - 14.50 Cedric Notreme, Paolo Di Tommaso: The state of Nextflow
14.50 - 15.20 Luke Goodsell: Industrial Personalised Immunotherapy Pipeline Development with Nextflow
15.20 - 15.50 Philip Ewels: NF-Core, A community effort to collect curated Nextflow pipelines
15.50 - 16.00 Alessia Visconti: Nextflow on the go
16.00 - 16.10 Julia Soellner: Exploiting orthology and de novo transcriptome assembly to refine target sequence information
16.10 - 16.20 Tiffany Delhomme: IARC nextflow pipelines: towards efficient cancer genomics analyses
16.20 - 16.30 Diogo Nuno Silva: FlowCraft, A modular, extensible and flexible tool to build, monitor and report nextflow pipelines
16.30 - 17.00 Coffee break
17.00 - 18.30 Hackathon
20.00 - open Social dinner

Friday, 23 November

9.30 - 10.00 Vladimir Kiselev: Nextflow at the heart of UK genomics
10.00 - 10.30 Simone Coughlan: Using Nextflow to create scalable and reproducible pipelines at Genomics Medicine Ireland
10.30 - 10.40 Roger Olivella: QCloud, A web-based quality control system for mass spectrometry-based proteomics laboratories
10.40 - 10.50 Francesco Strozzi: Agile pipelines with Nextflow: how to go from development to production without pain
10.50 - 11.00 Evan Floden: Nextflow support and enhancements
11.00 - 11.30 Coffee break
11.30 - 13.00 Hackathon
13.00 - 14.00 Lunch
14.00 - 14.30 Brendan Bouffler: Scaling genomics in the AWS cloud
14.30 - 17.00 Hackathon
17.00 - 17.30 Final remarks
17.30 - open Farewell drink

Registration

For details and registration check this link.