e2p2v4-container

E2P2 V4 Singularity Container

Singularity container for E2P2 version 4 (prediction of enzymatic functions). E2P2 Source: 20221206 Master version https://github.com/carnegie/E2P2 (including PRIAM jar file)

Version

v4 (20221206)

Build

sudo bash
singularity build e2p2v4.sif Singularity

Usage

Display the options:

./e2p2v4.sif -help
# or
singularity exec e2p2v4.sif E2P2 -help

Note: You don't need the following parameters since everything is packaged in the container:

• -b
• -bb
• -j
• -ps
• -r
• -pp

Use the -be option to set the blastp evalue threshold (default: 1e-2)

Run on a multifasta file:

./e2p2v4.sif  -i proteome.fas -be "1e-6"
# or
singularity exec e2p2v4.sif E2P2   -i proteome.fas -be "1e-6"

Maintainers

• [email protected]
• [email protected]