DESCRIPTION

Package: PathNet
Type: Package
Title: An R package for pathway analysis using topological information
Version: 1.41.1
Author: Bhaskar Dutta <bhaskar.dutta@gmail.com>, Anders Wallqvist
        <awallqvist@bhsai.org>, and Jaques Reifman <jreifman@bhsai.org>
Maintainer: Ludwig Geistlinger <ludwig.geistlinger@gmail.com>
Description: PathNet uses topological information present in pathways
        and differential expression levels of genes (obtained from
        microarray experiment) to identify pathways that are 1)
        significantly enriched and 2) associated with each other in the
        context of differential expression. The algorithm is described
        in: PathNet: A tool for pathway analysis using topological
        information. Dutta B, Wallqvist A, and Reifman J. Source Code
        for Biology and Medicine 2012 Sep 24;7(1):10.
License: GPL-3
Suggests: PathNetData, RUnit, BiocGenerics
biocViews: Pathways, DifferentialExpression, MultipleComparison, KEGG,
        NetworkEnrichment, Network