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standalone.py
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standalone.py
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# -*- coding: utf-8 -*-
"""
Created on Mon Oct 10 10:59:17 2022
@author: Administrator
"""
from src.tindeq import TindeqProgressor
# from src.analysis import analyse_data
#%%
import time
from tornado.web import StaticFileHandler
from datetime import date
import pandas as pd
import glob
import numpy as np
import asyncio
import tornado
from bokeh.server.server import Server
from bokeh.application import Application
from bokeh.application.handlers.function import FunctionHandler
from bokeh.plotting import figure, ColumnDataSource, curdoc
from bokeh.layouts import row, column
from bokeh.models import Button, Slider, Div, Band, Whisker, Spinner, DataTable,TableColumn,DateFormatter
from bokeh.models import Button, CustomJS, PasswordInput, PreText, TextInput
from bokeh.io import export_png
from playsound import playsound
import threading
import os
import smtplib
import ssl
# import mimetypes
from email.mime.multipart import MIMEMultipart
from email import encoders
from email.message import Message
from email.mime.base import MIMEBase
from email.mime.text import MIMEText
#%%
class sound_thread():
def __init__(self):
self.running=False
def start(self,soundfile,seconds):
playsound(soundfile,block=False)
self.running=True
def sctn():
self.running=False
S = threading.Timer(seconds, sctn)
S.start()
# soundthread.start()
st = sound_thread()
class IdleState:
bkg = 'orange'
@staticmethod
def update_cft(parent):
parent.div.style['background-color'] = parent.state.bkg
parent.div.text = '10:00'
@staticmethod
def end(parent):
parent.state_start = time.time()
parent.state = CountDownState
class CountDownState:
bkg = 'orange'
duration = 10
@staticmethod
def update_cft(parent):
# count down timer
elapsed = time.time() - parent.state_start
remain = CountDownState.duration - elapsed
fs = int(10 * (remain - int(remain))) *10
secs = int(remain)
parent.div.text = f"{secs:02d}:{fs:02d}"
parent.div.style['background-color'] = parent.state.bkg
if elapsed > CountDownState.duration:
CountDownState.end(parent)
if (remain<=3.5) & (st.running==False ):
st.start('tindeq_assessment/static/countdown.mp3',3.5)
@staticmethod
def end(parent):
parent.state_start = time.time()
parent.state = GoState
class GoState:
bkg = 'green'
duration = 7
@staticmethod
def update_cft(parent):
# count down timer
elapsed = time.time() - parent.state_start
remain = GoState.duration - elapsed
fs = int(10 * (remain - int(remain))) *10
secs = int(remain)
parent.div.text = f"{secs:02d}:{fs:02d}"
parent.div.style['background-color'] = parent.state.bkg
if elapsed > GoState.duration:
GoState.end(parent)
if (remain<=1.1) & (remain>.5) & (st.running==False ):
st.start('tindeq_assessment/static/end.wav',1.1)
@staticmethod
def end(parent):
parent.state_start = time.time()
parent.state = RestState
class RestState:
bkg = 'red'
duration = 3
@staticmethod
def update_cft(parent):
# count up timer
# count down timer
elapsed = time.time() - parent.state_start
remain = RestState.duration - elapsed
fs = int(10 * (remain - int(remain))) *10
secs = int(remain)
parent.div.text = f"{secs:02d}:{fs:02d}"
parent.div.style['background-color'] = parent.state.bkg
if elapsed > RestState.duration:
RestState.end(parent)
if (remain<=3.5) & (st.running==False ):
st.start('tindeq_assessment/static/countdown.mp3',3.5)
@staticmethod
def end(parent):
if parent.test_done:
parent.state = IdleState
else:
parent.state_start = time.time()
parent.state = GoState
parent.reps -= 1
class CFT:
def __init__(self):
self.x = []
self.y = []
self.xnew = []
self.ynew = []
self.active = False
self.duration = 240
self.reps = 24
self.state = IdleState
self.test_done = False
self.analysed = False
self.tindeq = None
# io_loop = tornado.ioloop.IOLoop.current()
# io_loop.add_callback(connect, self)
self.pwd = 'pw'
self.maxtest_right=False
self.maxtest_left=False
self.max_right=0
self.max_left=0
self.rfd_right=0
self.rfd_left=0
self.cf_peak_load = 0
self.cf_critical_load = 0
self.cf_x = []
self.cf_y = []
def log_force_sample(self, time, weight):
if self.active:
self.xnew.append(time)
self.ynew.append(weight)
self.x.append(time)
self.y.append(weight)
def reset(self):
self.xnew, self.ynew = [], []
def make_login(self, doc):
self.x = []
self.y = []
self.xnew = []
self.ynew = []
self.active = False
self.duration = 240
self.reps = 24
self.state = IdleState
self.test_done = False
self.analysed = False
self.maxtest_right=False
self.maxtest_left=False
self.max_right=0
self.max_left=0
self.cf_peak_load = 0
self.cf_critical_load = 0
self.cf_x = []
self.cf_y = []
self.seconds_left = 60*30
# password = PasswordInput(title="Password:")
button = Button(label="Get started!")
def verify():
# if password.value==self.pwd:
self.layout.children.pop()
# self.layout.children.pop()
self.make_document_choice(doc)
self.timout_t0= time.time()
# self.calback_timeout = self.doc.add_periodic_callback(self.check_for_timeout, 100)
button.on_click(verify)
# div_image = Div(text="""<img src="tindeq_assessment/static/Presentation1.gif" width = "800">""",min_height=400)
# self.layout=column(password,button)
self.layout=column(button)
doc.add_root(self.layout)
def make_gui(self,doc):
self.make_login(doc)
def make_document_email(self, doc):
now = pd.to_datetime(date.today())
# now = date.today()
self.df=pd.DataFrame(columns=['datetime','Max strength left in kg','Max strength right in kg','Peak force in kg','Critical force in kg','RFD left in kg/s','RFD right in kg/s'])
self.df.loc[0]=[now,self.max_left,self.max_right,self.cf_peak_load,self.cf_critical_load,self.rfd_left,self.rfd_right]
self.df=self.df.replace(0,np.nan)
# df=pd.DataFrame()
# df['datetime']=now
# df['max_left']=self.max_left
# df['max_right']=self.max_right
# df['peak_force']=self.cf_peak_load
# df['max_left']=self.cf_critical_load
# df['rfd_left']=self.rfd_left
# df['rfd_right']=self.rfd_right
Columns =[ TableColumn(field="datetime", title="Date", formatter=DateFormatter())]
Columns= Columns + [TableColumn(field=Ci, title=Ci) for Ci in self.df.columns[1::]] # bokeh columns
self.source_results=ColumnDataSource(self.df)
self.data_table = DataTable(columns=Columns,source=self.source_results,index_position=None,height=100,auto_edit=True,sizing_mode='stretch_width')
self.div_results = Div(text='',style={'font-size': '100%', 'color': 'black',
'text-align': 'left'})
self.cf_percent=0
# self.resultsource = ColumnDataSource(data=dict(x=self.cf_x, y=self.cf_y))
# fig = figure( sizing_mode='stretch_both', x_axis_label='Seconds', y_axis_label='kg')
# fig.line(x='x', y='y', source=self.resultsource)
# self.resultsource = ColumnDataSource(data=dict([]))
TOOLTIPS = [("Value", "$y")]
fig1 = figure( title='Max. Strength',sizing_mode='stretch_both', y_axis_label='kg',x_axis_type='datetime',tooltips=TOOLTIPS)
fig1.line(x='datetime', y='Max strength left in kg', source=self.source_results,color='red',legend_label="left")
fig1.circle(x='datetime', y='Max strength left in kg', source=self.source_results,color='red',size=20)
fig1.line(x='datetime', y='Max strength right in kg', source=self.source_results,color='blue',legend_label="right")
fig1.circle(x='datetime', y='Max strength right in kg', source=self.source_results,color='blue',size=20)
fig1.legend.location = "top_left"
fig2 = figure( title='Peak force',sizing_mode='stretch_both', y_axis_label='kg',x_axis_type='datetime',tooltips=TOOLTIPS)
fig2.line(x='datetime', y='Peak force in kg', source=self.source_results,color='red')
fig2.circle(x='datetime', y='Peak force in kg', source=self.source_results,color='red',size=20)
fig3 = figure( title='Critical force',sizing_mode='stretch_both', y_axis_label='kg',x_axis_type='datetime',tooltips=TOOLTIPS)
fig3.line(x='datetime', y='Critical force in kg', source=self.source_results,color='red')
fig3.circle(x='datetime', y='Critical force in kg', source=self.source_results,color='red',size=20)
fig4 = figure( title='Rate of force developmendt (RFD)',sizing_mode='stretch_both', y_axis_label='kg per s',x_axis_type='datetime',tooltips=TOOLTIPS)
fig4.line(x='datetime', y='RFD left in kg/s', source=self.source_results,color='red',legend_label="left")
fig4.circle(x='datetime', y='RFD left in kg/s', source=self.source_results,color='red',size=20)
fig4.line(x='datetime', y='RFD right in kg/s', source=self.source_results,color='blue',legend_label="right")
fig4.circle(x='datetime', y='RFD right in kg/s', source=self.source_results,color='blue',size=20)
fig4.legend.location = "top_left"
self.text_input_mail = TextInput(value="", title="E-mail:")
self.be1 = Button(label='Save results to database')
def save_data():
email = self.text_input_mail.value
if len(email)>2 & ('@' in email) & (np.sum([self.max_left,self.max_right,self.cf_peak_load,self.cf_critical_load])>0):
df_cf=pd.DataFrame([])
df_cf['seconds']=self.cf_x
df_cf['kg']=self.cf_y
df_cf.to_csv( email + '_cf.csv' )
df_mail = pd.DataFrame( self.source_results.data )
df_mail.iloc[:,1::].to_csv( email + '_results.csv' )
# print(text_input_mail.value)
self.be1.on_click(save_data)
# self.be2 = Button(label='Compare to previous tests')
# def retrive_data():
# email = self.text_input_mail.value
# if len(email)>2 & ('@' in email):
# # save_data()
# resultfiles = glob.glob('*_results.csv')
# if email + '_results.csv' in resultfiles:
# df_results = pd.read_csv( email + '_results.csv',index_col=0 )
# df_results['datetime'] = pd.to_datetime( df_results['datetime'] )
# df_results=df_results.append( {'datetime':now,'max_left':self.max_left,'max_right':self.max_right,'peak_force':self.cf_peak_load,'critical_force':self.cf_critical_load,'rfd_left':self.rfd_left,'rfd_right':self.rfd_right},ignore_index=True )
# df_results=df_results.replace(0,np.nan)
# df_results=df_results.drop_duplicates()
# self.resultsource.data = df_results
# # print(text_input_mail.value)
# self.be2.on_click(retrive_data)
self.be3 = Button(label='Send results to e-mail')
def sendmail():
email = self.text_input_mail.value
if len(email)>2 & ('@' in email) :
save_data()
emailfrom = '[email protected]'
emailto = email
password = 'ixaoacagxwdqsouy'
# ixaoacagxwdqsouy [email protected]
msg = MIMEMultipart()
msg["From"] = emailfrom
msg["To"] = emailto
msg["Subject"] = 'Climbing strength test results'
# msgtext ='''\
# Results:\n\
# Max. strength left hand: {:.2f} kg\n\
# Max. strength right hand: {:.2f} kg\n\
# Peak force: {:.2f} kg\n\
# Critical force: {:.2f} kg\n\
# Critical force: {:.2f} % of peak force\n\
# '''.format( self.max_left,self.max_right,self.cf_peak_load,self.cf_critical_load,self.cf_percent)
msgtext = self.div_results.text
msg.attach(MIMEText( msgtext ,'html'))
att = email + '_results.csv'
if os.path.exists( att ):
fp = open( att, "rb")
attachment = MIMEBase('application', 'x-csv')
attachment.set_payload(fp.read())
fp.close()
encoders.encode_base64(attachment)
attachment.add_header("Content-Disposition", "attachment", filename=att)
msg.attach(attachment)
att = email + '_cf.csv'
if os.path.exists( att ):
fp = open( att, "rb")
attachment = MIMEBase('application', 'x-csv')
attachment.set_payload(fp.read())
fp.close()
encoders.encode_base64(attachment)
attachment.add_header("Content-Disposition", "attachment", filename=att)
msg.attach(attachment)
try:
ctx = ssl.create_default_context()
server = smtplib.SMTP_SSL("smtp.gmail.com", port=465, context=ctx)
server.login(emailfrom, password)
# print(df_files_sent)
server.sendmail(emailfrom, emailto.split(','), msg.as_string())
print('email sent: ' + msg["Subject"] )
server.quit()
except Exception as e:
print(e)
self.be3.on_click(sendmail)
self.text_input_bw = TextInput(value="", title="Enter body weight in kg to convert to %")
self.be4 = Button(label="Back to main menue")
def back():
self.layout.children.pop()
self.layout.children.pop()
self.make_document_choice(doc)
doc.remove_periodic_callback(self.calback_update_mail)
self.be4.on_click(back)
widgets = column( self.text_input_mail,self.be1,self.be3,self.be4,self.text_input_bw,self.div_results ,width=400 )
first_row = column(self.data_table,row(fig1,fig4,sizing_mode='stretch_both'),row(fig2,fig3,sizing_mode='stretch_both'),sizing_mode='stretch_both')
self.layout=row(widgets, first_row,sizing_mode='stretch_height')
doc.add_root(self.layout)
doc.add_root(self.layout)
self.calback_update_mail = doc.add_periodic_callback(self.update_email, 200)
def update_email(self):
if self.cf_peak_load>0:
self.cf_percent=(self.cf_critical_load/self.cf_peak_load)*100
email = self.text_input_mail.value
if len(email)>2 & ('@' in email) :
self.be1.disabled = False
# self.be2.disabled = False
self.be3.disabled = False
try:
resultfiles = glob.glob('*_results.csv')
if email + '_results.csv' in resultfiles:
df_old = pd.read_csv( email + '_results.csv',index_col=0 )
df_old['datetime'] = pd.to_datetime( df_old['datetime'] )
df_new=pd.concat([self.df,df_old])
# print(df_new)
# self.df.loc[0 if pd.isnull(self.df.index.max()) else self.df.index.max() + 1]=[self.max_left,self.max_right,self.cf_peak_load,self.cf_critical_load,self.rfd_left,self.rfd_right]
# df_results=df_results.append( {'datetime':now,'max_left':self.max_left,'max_right':self.max_right,'peak_force':self.cf_peak_load,'critical_force':self.cf_critical_load,'rfd_left':self.rfd_left,'rfd_right':self.rfd_right},ignore_index=True )
df_new=df_new.replace(0,np.nan)
df_new=df_new.drop_duplicates()
self.source_results.data = df_new
else:
self.source_results.data = self.df
except:
pass
else:
self.be1.disabled = True
# self.be2.disabled = True
self.be3.disabled = True
self.source_results.data = self.df
try:
bw=float(self.text_input_bw.value)
cf=self.cf_critical_load
french_grades={1:'1',2:'2',3:'2+',4:'3-',5:'3',6:'3+',7:'4',8:'4+',9:'5',10:'5+',11:'6a',12:'6a+',13:'6b',14:'6b+',15:'6c',16:'6c+',17:'7a',18:'7a+',19:'7b',20:'7b+',21:'7c',22:'7c+',23:'8a',24:'8a+',25:'8b',26:'8b+',27:'8c',28:'8c+',29:'9a',30:'9a+'}
prediction='<strong>Predicted redpoint grades (french sport):</strong><br><ul>'
prediction+= '<li>If one predictor is far below the others, you might improve by focusing training here</li>'
prediction+= '<li>If predictions are far below your real redpoint level, you might improve by focusing on techniqe and mental traning</li>'
if self.max_right + self.max_left >0:
maxxx=np.array( [self.max_right,self.max_left] )
max_onehand=np.mean( maxxx[maxxx>0] )
kg=max_onehand *2 -bw
if kg<=20:
gmin=7
gmax=11
else:
irca = (kg*9.81 + 59.9 )/ 28.5
gmin=np.round(irca)-2
gmax=np.round(irca)+2
if gmin < 1:
gmin=1
if gmax > 30:
gmax=30
if gmax < 1:
gmax=1
if gmin > 30:
gmin=30
prediction+= '<li>Max. strength: '+french_grades[gmin] +' - '+ french_grades[gmax]+'</li>'
if cf>0:
# irca = cf/bw* 100*0.3 + 6
gmin= np.round(cf/bw*100 *0.25 + 6 )
gmax= np.round(cf/bw*100 *0.35 + 6 )
if gmin < 1:
gmin=1
if gmax > 30:
gmax=30
if gmax < 1:
gmax=1
if gmin > 30:
gmin=30
french_grades[gmin]
french_grades[gmax]
prediction+= '<li>Endurance: '+french_grades[gmin] +' - '+ french_grades[gmax]+'</li>'
if self.rfd_right+self.rfd_left>0 :
rfddd=np.array( [self.rfd_right,self.rfd_left] )
rfd=np.mean( rfddd[rfddd>0] )
# 117.8 irca - 798.3 = rfd new
irca=(rfd*9.81 + 798.3) / 117.8
gmin=np.round(irca)-1
gmax=np.round(irca)+1
if gmin < 1:
gmin=1
if gmax > 30:
gmax=30
if gmax < 1:
gmax=1
if gmin > 30:
gmin=30
prediction+= '<li>Contact strength: '+french_grades[gmin] +' - '+ french_grades[gmax]+'</li>'
self.div_results.text='<strong>Results:</strong> <br>\
<ul>\
<li>Max. strength left: {:.2f} % BW</li>\
<li>Max. strength right: {:.2f} % BW</li>\
<li>Peak force: {:.2f} % BW</li>\
<li>Critical force: {:.2f} % BW</li>\
<li>Critical force: {:.2f} % of peak force</li>\
<li>RFD left: {:.2f} % kg/s</li>\
<li>RFD right: {:.2f} % kg/s</li></ul>\
'.format( (self.max_left/bw)*100,(self.max_right/bw)*100,(self.cf_peak_load/bw)*100,(self.cf_critical_load/bw)*100,self.cf_percent,self.rfd_left,self.rfd_right)
self.div_results.text+= prediction + '</ul>'
# else:
# self.div_results.text='<strong>Results:</strong> <br>\
# <ul>\
# <li>Max. strength left hand: {:.2f} % BW</li>\
# <li>Max. strength right hand: {:.2f} % BW</li>\
# <li>Peak force: {:.2f} % BW</li>\
# <li>Critical force: {:.2f} % BW</li>\
# <li>Critical force: {:.2f} % of peak force</li>\
# <li>RFD left: {:.2f} % kg/s</li>\
# <li>RFD right: {:.2f} % kg/s</li></ul>\
# '.format( (self.max_left/bw)*100,(self.max_right/bw)*100,(self.cf_peak_load/bw)*100,(self.cf_critical_load/bw)*100,self.cf_percent,self.rfd_left,self.rfd_right)
except Exception as e:
# print(e)
self.div_results.text='<strong>Results:</strong> <br>\
<ul>\
<li>Max. strength left hand: {:.2f} kg</li>\
<li>Max. strength right hand: {:.2f} kg</li>\
<li>Peak force: {:.2f} kg</li>\
<li>Critical force: {:.2f} kg</li>\
<li>Critical force: {:.2f} % of peak force</li>\
<li>RFD left: {:.2f} % kg/s</li>\
<li>RFD right: {:.2f} % kg/s</li>\
</ul>'.format( self.max_left,self.max_right,self.cf_peak_load,self.cf_critical_load,self.cf_percent,self.rfd_left,self.rfd_right)
def check_for_timeout(self):
self.seconds_left = (60*30) - (time.time() - self.timout_t0 )
# print(self.seconds_left)
if self.seconds_left < 0:
self.layout.children.pop()
self.layout.children.pop()
self.make_login(self.doc)
self.doc.remove_periodic_callback(self.calback_timeout)
def make_document_choice(self, doc):
if self.tindeq is None:
io_loop = tornado.ioloop.IOLoop.current()
io_loop.add_callback(connect, self)
# if self.tindeq is not None:
# io_loop = tornado.ioloop.IOLoop.current()
# io_loop.add_callback(tare, self)
# button_tare = Button(label="Tare")
# def button_tarefunc():
# if self.tindeq is not None:
# io_loop = tornado.ioloop.IOLoop.current()
# io_loop.add_callback(tare, self)
# button_tare.on_click(button_tarefunc)
button_max = Button(label="Maximum strength test")
def maxi():
self.layout.children.pop()
self.layout.children.pop()
self.make_document_max(doc)
button_max.on_click(maxi)
button_cft = Button(label="Endurance (Critical force) test")
def cft():
self.layout.children.pop()
self.layout.children.pop()
self.make_document_cft(doc)
button_cft.on_click(cft)
button_send = Button(label="Show results & send mail")
def sendmail():
self.layout.children.pop()
self.layout.children.pop()
self.make_document_email(doc)
button_send.on_click(sendmail)
button_live = Button(label="Live data")
def livedata():
self.layout.children.pop()
self.layout.children.pop()
self.make_document_live(doc)
button_live.on_click(livedata)
button_train = Button(label="Training")
def livedatatarget():
self.layout.children.pop()
self.layout.children.pop()
self.make_document_livetarget(doc)
button_train.on_click(livedatatarget)
button_rfd = Button(label="Rate of force development (Contact strength)")
def butrfd():
self.layout.children.pop()
self.layout.children.pop()
self.make_document_rfd(doc)
button_rfd.on_click(butrfd)
button_quit = Button(label="Quit")
def quitbut():
self.layout.children.pop()
self.layout.children.pop()
self.make_login(doc)
button_quit.on_click(quitbut)
div_timeleft = Div(text='Minutes left: '+str(int(self.seconds_left/60)),
style={'font-size': '100%', 'color': 'black',
'text-align': 'center'})
c = column(button_max,button_cft,button_rfd,button_send,button_live,button_train,button_quit)
self.layout=column(c,column() )
doc.add_root(self.layout)
self.doc=doc
def make_document_live(self, doc):
self.reset()
self.source = ColumnDataSource(data=dict(x=[], y=[]))
fig = figure(title='Real-time Data', sizing_mode='stretch_both', x_axis_label='Seconds', y_axis_label='kg')
fig.line(x='x', y='y', source=self.source,line_width =2)
doc.title = "Tindeq CFT"
self.btn_go = Button(label='Waiting for Progressor...')
self.btn_go.on_click(self.onclick_live)
self.button_save = Button(label='Save and back to main menue')
self.div_load = Div(text='Load: ---',
style={'font-size': '300%', 'color': 'black',
'text-align': 'center'})
def mainmenue():
self.layout.children.pop()
self.layout.children.pop()
self.make_document_choice(doc)
doc.remove_periodic_callback(self.calback_update_live)
if self.tindeq is not None:
io_loop = tornado.ioloop.IOLoop.current()
io_loop.add_callback(stop_tindeq_logging, self)
self.button_save.on_click(mainmenue)
div_instruct = Div(text='Turn on tindeq device using small black button',\
style={'font-size': '100%', 'color': 'black',
'text-align': 'left'})
widgets = column( div_instruct,self.btn_go , self.button_save,self.div_load,width=400 )
# first_row = row(widgets, fig)
self.layout=row(widgets, fig)
doc.add_root(self.layout)
self.fig = fig
self.calback_update_live = doc.add_periodic_callback(self.update_live, 50)
self.btn_go.disabled=True
def update_live(self):
if self.tindeq is not None:
self.btn_go.disabled=False
self.btn_go.label = 'Start data stream'
self.source.stream({'x': self.xnew, 'y': self.ynew})
x= np.array( self.source.data['x'] ,dtype=float )
y= np.array( self.source.data['y'] ,dtype=float )
if len(x)>1:
ix_valid = x > (x.max()-20)
self.source.data=dict(x=x[ix_valid], y= y[ix_valid])
self.div_load.text = 'Load: '+str( np.abs(np.round(y[-1],2)) ) +' kg'
self.reset()
def onclick_live(self):
self.duration = 60*30
self.reset()
self.source.data=dict(x=[], y=[])
io_loop = tornado.ioloop.IOLoop.current()
io_loop.add_callback(start_tindeq_logging, self)
###############
def make_document_livetarget(self, doc):
self.reset()
self.source = ColumnDataSource(data=dict(x=[], y=[]))
self.source_end = ColumnDataSource(data=dict(x=[], y=[]))
self.fig = figure(title='Real-time Data', sizing_mode='stretch_both', x_axis_label='Seconds', y_axis_label='kg')
self.fig.line(x='x', y='y', source=self.source,line_width =2)
self.fig.line(x='x', y='y', source=self.source_end,line_width =2,line_color='black',line_dash='dashed')
self.btn_go = Button(label='Waiting for Progressor...')
self.btn_go.on_click(self.onclick_livetarget)
self.btn_stop = Button(label='Stop and reset')
self.btn_stop.on_click(self.onclick_stop)
self.button_save = Button(label='Back to main menue')
self.div_load = Div(text='Load: ---',
style={'font-size': '300%', 'color': 'black',
'text-align': 'center'})
def mainmenue():
self.layout.children.pop()
self.layout.children.pop()
self.make_document_choice(doc)
doc.remove_periodic_callback(self.calback_update_livetarget)
if self.tindeq is not None:
io_loop = tornado.ioloop.IOLoop.current()
io_loop.add_callback(stop_tindeq_logging, self)
self.button_save.on_click(mainmenue)
div_instruct = Div(text='Turn on tindeq device using small black button',\
style={'font-size': '100%', 'color': 'black',
'text-align': 'left'})
self.spinner_on = Spinner(title="Pull time in s", low=1, step=1, value=10)
self.spinner_rest = Spinner(title="Rest time in s", low=1, step=1, value=6)
self.spinner_force = Spinner(title="Target force in kg", low=1, step=1, value=50)
self.spinner_reps = Spinner(title="Repetitions", low=1, step=1, value=10)
r1=row(self.spinner_on,self.spinner_rest,sizing_mode='scale_width')
r2=row(self.spinner_force,self.spinner_reps,sizing_mode='scale_width')
# s=5
# dur = self.spinner_on.value + self.spinner_rest.value
# r=np.arange(self.spinner_reps.value)
# self.target_boxes= self.fig.quad(top=self.spinner_force.value+5, bottom=self.spinner_force.value-5, left=s+r*dur,
# right=s+r*dur +self.spinner_on.value, color='red',alpha=0.5)
self.source_targetbox= ColumnDataSource(data=dict(t=[], b=[], l=[], r=[]))
self.fig.quad(top='t', bottom='b', left='l', right='r', source=self.source_targetbox, color='red',alpha=0.5)
widgets = column( div_instruct,r1,r2,self.btn_go , self.btn_stop,self.button_save,self.div_load,width=400 )
# first_row = row(widgets, fig)
self.layout=row(widgets, self.fig)
doc.add_root(self.layout)
# self.fig = fig
self.calback_update_livetarget = doc.add_periodic_callback(self.update_livetarget, 50)
self.btn_go.disabled=True
def update_livetarget(self):
if self.tindeq is not None:
self.btn_go.disabled=False
self.btn_go.label = 'Start data stream'
self.source.stream({'x': self.xnew, 'y': self.ynew})
# self.fig.y_range.start=0
# self.fig.y_range.end=self.spinner_force.value+10
# print( self.source_targetbox.data)
# for r in range(self.spinner_reps.value):
# dur = self.spinner_on.value + self.spinner_rest.value
# self.fig.quad(top=self.spinner_force.value+5, bottom=self.spinner_force.value-5, left=s+r*dur,
# right=s+r*dur +self.spinner_on.value, color='red',alpha=0.5)
x= np.array( self.source.data['x'] ,dtype=float )
y= np.array( self.source.data['y'] ,dtype=float )
s=5
dur = self.spinner_on.value + self.spinner_rest.value
r=np.arange(self.spinner_reps.value)
tt= self.spinner_force.value+2 *np.ones(len(r))
bb=self.spinner_force.value-2 *np.ones(len(r))
ll=s+r*dur
rr= s+r*dur+self.spinner_on.value
self.source_targetbox.data= dict(t=tt, b=bb, l=ll, r=rr)
if len(x)>1:
self.source_end.data={'x': [np.max(x),np.max(x)], 'y': [0,self.spinner_force.value+1]}
# ix_valid = x > (x.max()-30)
# self.source.data=dict(x=x, y= y)
self.div_load.text = 'Load: '+str( np.abs(np.round(y[-1],2)) ) +' kg'
# t=x[ix_valid]
# t[-1]=t[-1]+5
# ix_box = ((rr>t[0]) & (ll<t[0]) ) | ( (ll<t[-1]) & (rr>t[-1])) | ( (ll>=t[0]) & (rr<=t[-1]) )
# tt2=tt[ix_box]
# bb2=bb[ix_box]
# ll2=ll[ix_box]
# rr2=rr[ix_box]
# ll2[ll2<t[0]]=t[0]
# rr2[rr2>t[-1]]=t[-1]
# self.source_targetbox.data= dict(t=tt2, b=bb2, l=ll2, r=rr2)
# self.fig.x_range.start=t[0]
# self.fig.x_range.end=t[-1]
self.reset()
def onclick_stop(self):
io_loop = tornado.ioloop.IOLoop.current()
io_loop.add_callback(stop_tindeq_logging, self)
self.reset()
self.source.data=dict(x=[], y=[])
self.source_end.data=dict(x=[], y=[])
def onclick_livetarget(self):
self.reset()
self.source.data=dict(x=[], y=[])
self.source_end.data=dict(x=[], y=[])
io_loop = tornado.ioloop.IOLoop.current()
io_loop.add_callback(start_tindeq_logging, self)
# s=1
# dur = self.spinner_on.value + self.spinner_rest.value
# r=np.arange(self.spinner_reps.value)
# tt= self.spinner_force.value+5 *np.ones(len(r))
# bb=self.spinner_force.value-5 *np.ones(len(r))
# ll=s+r*dur
# rr= s+r*dur+self.spinner_on.value
# self.source_targetbox.data= dict(t=tt, b=bb, l=ll, r=rr)
########
def make_document_max(self, doc):
self.reset()
self.source = ColumnDataSource(data=dict(x=[], y=[]))
fig = figure(title='Real-time Data', sizing_mode='stretch_both', x_axis_label='Seconds', y_axis_label='kg')
fig.line(x='x', y='y', source=self.source,line_width =2)
doc.title = "Tindeq CFT"
self.btn_left = Button(label='Waiting for Progressor...')
self.btn_right = Button(label='Waiting for Progressor...')
# button_reset = Button(label='Reset')
div_instruct = Div(text='<strong>Instructions:</strong> <br>\
<ul>\
<li>Turn on tindeq device (small black button)</li>\
<li>Pull as hard as you can on 20mm edge!</li>\
<li>Increase force until you reach your maximum, than stop</li>\
<li>Each tests runs for 20s</li>\
</ul>',
style={'font-size': '100%', 'color': 'black',
'text-align': 'left'})
self.div_lh = Div(text='Left hand: ---',
style={'font-size': '200%', 'color': 'black',
'text-align': 'center'})
self.div_rh = Div(text='Right hand: ---',
style={'font-size': '200%', 'color': 'black',
'text-align': 'center'})
self.btn_left.on_click(self.onclick_left)
self.btn_right.on_click(self.onclick_right)
self.button_save = Button(label='Save and back to main menue')
def mainmenue():
self.layout.children.pop()
self.layout.children.pop()
self.make_document_choice(doc)
doc.remove_periodic_callback(self.calback_update_max)
if self.tindeq is not None:
io_loop = tornado.ioloop.IOLoop.current()
io_loop.add_callback(stop_tindeq_logging, self)
self.button_save.on_click(mainmenue)
widgets = column( div_instruct,self.btn_left ,self.div_lh,self.btn_right,self.div_rh, self.button_save,width=400 )
# first_row = row(widgets, fig)
self.layout=row(widgets, fig)
doc.add_root(self.layout)
self.fig = fig
self.calback_update_max = doc.add_periodic_callback(self.update_max, 50)
self.btn_right.disabled=True
self.btn_left.disabled=True
# self.button_save.disabled=True
def onclick_left(self):
self.duration = 20
self.source.data=dict(x=[], y=[])
self.maxtest_left=True
self.maxtest_right=False
def sctn():
self.maxtest_left=False
s = threading.Timer(self.duration, sctn)
s.start()
io_loop = tornado.ioloop.IOLoop.current()
io_loop.add_callback(start_test_max, self)
def onclick_right(self):
self.duration = 20
self.source.data=dict(x=[], y=[])
self.maxtest_right=True
self.maxtest_left=False
# self.btn_right.disabled=True
# self.btn_left.disabled=True
def sctn():
self.maxtest_right=False
s = threading.Timer(self.duration, sctn )
s.start()
io_loop = tornado.ioloop.IOLoop.current()
io_loop.add_callback(start_test_max, self)
def update_max(self):
self.source.stream({'x': self.xnew, 'y': self.ynew})
if (len( self.source.data['y'] )>1) & (self.maxtest_right):
self.max_right= np.round( np.max( np.array( self.source.data['y'] ,dtype=float ) ),2)
self.btn_right.disabled=True
self.btn_left.disabled=True
self.button_save.disabled=True
self.div_rh.text = 'Right hand: '+str( self.max_right ) +' kg'
if (len( self.source.data['y'] )>1) & (self.maxtest_left):
self.max_left= np.round( np.max( np.array( self.source.data['y'] ,dtype=float ) ),2)
self.btn_right.disabled=True
self.btn_left.disabled=True
self.button_save.disabled=True
if (self.maxtest_right==False) & (self.maxtest_left==False) & (self.tindeq is not None):
self.btn_right.disabled=False
self.btn_left.disabled=False
self.button_save.disabled=False
self.btn_right.label = 'Start right hand test'
self.btn_left.label = 'Start left hand test'
self.div_lh.text = 'Left hand: '+str( self.max_left ) +' kg'
# nlaps = self.duration // 10
# self.laps.text = f"Rep {1 + nlaps - self.reps}/{nlaps}"
self.reset()