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FastQt as command line displays too much #81

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dridk opened this issue Jun 22, 2017 · 1 comment
Open

FastQt as command line displays too much #81

dridk opened this issue Jun 22, 2017 · 1 comment
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@dridk
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dridk commented Jun 22, 2017

Actually it display unnecessary line :

Analysis Coriell_1.clean.fastq.gz 35 %
Analysis Coriell_1.clean.fastq.gz 35 %
Analysis Coriell_1.clean.fastq.gz 35 %
Analysis Coriell_1.clean.fastq.gz 35 %
Analysis Coriell_1.clean.fastq.gz 35 %
Analysis Coriell_1.clean.fastq.gz 35 %
Analysis Coriell_1.clean.fastq.gz 35 %
Analysis Coriell_1.clean.fastq.gz 35 %
Analysis Coriell_1.clean.fastq.gz 35 %
Analysis Coriell_1.clean.fastq.gz 35 %
Analysis Coriell_1.clean.fastq.gz 40 %
Analysis Coriell_1.clean.fastq.gz 40 %
Analysis Coriell_1.clean.fastq.gz 40 %
Analysis Coriell_1.clean.fastq.gz 35 %
Analysis Coriell_1.clean.fastq.gz 35 %
Analysis Coriell_1.clean.fastq.gz 35 %
Analysis Coriell_1.clean.fastq.gz 35 %
Analysis Coriell_1.clean.fastq.gz 35 %
Analysis Coriell_1.clean.fastq.gz 35 %
Analysis Coriell_1.clean.fastq.gz 35 %
Analysis Coriell_1.clean.fastq.gz 35 %
Analysis Coriell_1.clean.fastq.gz 35 %
Analysis Coriell_1.clean.fastq.gz 35 %
Analysis Coriell_1.clean.fastq.gz 40 %
Analysis Coriell_1.clean.fastq.gz 40 %
Analysis Coriell_1.clean.fastq.gz 40 %

It would be better to display only when percent change :

Analysis Coriell_1.clean.fastq.gz 35 %
Analysis Coriell_1.clean.fastq.gz 40 %
@dridk dridk added this to the 0.3 milestone Jun 22, 2017
@dridk dridk changed the title FastQt as command line display too much FastQt as command line displays too much Jun 22, 2017
@natir
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natir commented Jun 22, 2017

Maybe we can replace actual system by a class like Progress in this file https://github.com/GATB/gatb-core/blob/bc291fb615247a184bc3a9202ddabeaccd1cc0ed/gatb-core/src/gatb/tools/misc/impl/Progress.cpp

@natir natir self-assigned this Jun 22, 2017
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