Add doxygen #11
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| # Build and test Kokkos FFT using Docker and Singularity images. Pre-generated | |
| # images are pulled from Github registry; they are updated only if the current | |
| # PR or commit modified the Docker files. | |
| name: CI | |
| on: | |
| pull_request: | |
| branches: | |
| - main | |
| env: | |
| # Customize the CMake build type here (Release, Debug, RelWithDebInfo, etc.) | |
| BUILD_TYPE: Release | |
| # Force the use of BuildKit for Docker | |
| DOCKER_BUILDKIT: 1 | |
| jobs: | |
| lint: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: DoozyX/[email protected] | |
| with: | |
| source: 'common/ fft/ examples/' | |
| exclude: '' | |
| extensions: 'hpp,cpp' | |
| clangFormatVersion: 12 | |
| check_docker_files: | |
| runs-on: ubuntu-latest | |
| outputs: | |
| # true if any Docker file was modified in the PR (PR mode) or since last pushed commit (push mode) | |
| docker_files_have_changed: ${{ steps.get_changed_docker_files.outputs.any_changed == 'true' }} | |
| # use "pr" as image name suffix if on PR mode and if any Docker file was modified, otherwise use "main" | |
| # this is intended to avoid a PR test to alter Docker images for other PRs or for the main branch | |
| image_name_suffix: ${{ steps.get_changed_docker_files.outputs.any_changed == 'true' && github.event_name == 'pull_request' && 'pr' || 'main' }} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 | |
| - name: Get changed Dockerfiles | |
| id: get_changed_docker_files | |
| uses: tj-actions/changed-files@v42 | |
| with: | |
| files: docker/**/Dockerfile | |
| - name: List changed Dockerfiles | |
| if: ${{ steps.docker_files_have_changed.outputs.any_changed == 'true' }} | |
| env: | |
| ALL_CHANGED_FILES: ${{ steps.docker_files_have_changed.outputs.all_changed_files }} | |
| run: | | |
| for file in "$ALL_CHANGED_FILES"; do | |
| echo "$file was changed" | |
| done | |
| build_base: | |
| needs: check_docker_files | |
| if: ${{ needs.check_docker_files.outputs.docker_files_have_changed == 'true' }} | |
| uses: ./.github/workflows/__build_base.yaml | |
| with: | |
| image_name_suffix: ${{ needs.check_docker_files.outputs.image_name_suffix }} | |
| build: | |
| runs-on: ubuntu-latest | |
| needs: | |
| - check_docker_files | |
| - build_base | |
| # run this job even if build_base did not run | |
| if: ${{ ! cancelled() && (needs.build_base.result == 'success' || needs.build_base.result == 'skipped') }} | |
| strategy: | |
| matrix: | |
| backend: | |
| - name: openmp | |
| c_compiler: gcc | |
| cxx_compiler: g++ | |
| cmake_flags: -DKokkos_ENABLE_OPENMP=ON | |
| - name: cuda | |
| c_compiler: gcc | |
| cxx_compiler: g++ | |
| cmake_flags: -DKokkos_ENABLE_CUDA=ON -DKokkos_ARCH_AMPERE80=ON | |
| - name: hip | |
| c_compiler: hipcc | |
| cxx_compiler: hipcc | |
| cmake_flags: -DKokkos_ENABLE_HIP=ON -DKokkos_ARCH_VEGA90A=ON | |
| - name: sycl | |
| c_compiler: icx | |
| cxx_compiler: icpx | |
| # building for Intel PVC was unsuccessful without the proper device | |
| # for now on, we simply use Intel GPU generic code | |
| cmake_flags: -DKokkos_ENABLE_SYCL=ON -DKokkos_ARCH_INTEL_GEN=ON | |
| target: | |
| - name: native | |
| cmake_flags: "" | |
| - name: host_device | |
| cmake_flags: -DKokkosFFT_ENABLE_HOST_AND_DEVICE=ON | |
| exclude: | |
| - backend: | |
| name: openmp | |
| target: | |
| name: host_device | |
| steps: | |
| - name: Free Disk Space (Ubuntu) | |
| uses: jlumbroso/[email protected] | |
| with: | |
| tool-cache: true | |
| large-packages: false | |
| - name: Checkout built branch | |
| uses: actions/checkout@v4 | |
| with: | |
| submodules: recursive | |
| - name: Configure | |
| run: | | |
| docker run -v ${{ github.workspace }}:/work ghcr.io/cexa-project/kokkos-fft/base_${{ matrix.backend.name }}_${{ needs.check_docker_files.outputs.image_name_suffix }} \ | |
| cmake -B build \ | |
| -DCMAKE_INSTALL_PREFIX=/work/install \ | |
| -DCMAKE_BUILD_TYPE=${{ env.BUILD_TYPE }} \ | |
| -DCMAKE_C_COMPILER=${{ matrix.backend.c_compiler }} \ | |
| -DCMAKE_CXX_COMPILER=${{ matrix.backend.cxx_compiler }} \ | |
| -DCMAKE_CXX_STANDARD=17 \ | |
| -DBUILD_TESTING=ON \ | |
| -DKokkosFFT_INTERNAL_Kokkos=ON \ | |
| ${{ matrix.backend.cmake_flags }} \ | |
| ${{ matrix.target.cmake_flags }} | |
| - name: Build | |
| run: | | |
| docker run -v ${{ github.workspace }}:/work ghcr.io/cexa-project/kokkos-fft/base_${{ matrix.backend.name }}_${{ needs.check_docker_files.outputs.image_name_suffix }} \ | |
| cmake --build build -j $(( $(nproc) * 2 + 1 )) | |
| - name: Prepare artifacts | |
| # this is mandatory to preserve execution rights | |
| run: tar -cvf tests_${{ matrix.backend.name }}.tar build/ | |
| if: ${{ matrix.target.name == 'native' }} | |
| - name: Save artifacts | |
| # use v3 as more recent versions cannot run on Ruche | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: tests_${{ matrix.backend.name }} | |
| path: tests_${{ matrix.backend.name }}.tar | |
| if: ${{ matrix.target.name == 'native' }} | |
| - name: Install | |
| run: | | |
| docker run -v ${{ github.workspace }}:/work ghcr.io/cexa-project/kokkos-fft/base_${{ matrix.backend.name }}_${{ needs.check_docker_files.outputs.image_name_suffix }} \ | |
| cmake --install build | |
| - name: Configure and build test code | |
| # Use the built and installed Kokkos FFT library to build a test code | |
| run: | | |
| docker run -v ${{ github.workspace }}:/work ghcr.io/cexa-project/kokkos-fft/base_${{ matrix.backend.name }}_${{ needs.check_docker_files.outputs.image_name_suffix }} \ | |
| cmake -B build_test \ | |
| -DCMAKE_BUILD_TYPE=${{env.BUILD_TYPE}} \ | |
| -DCMAKE_C_COMPILER=${{ matrix.backend.c_compiler }} \ | |
| -DCMAKE_CXX_COMPILER=${{ matrix.backend.cxx_compiler }} \ | |
| -DCMAKE_CXX_STANDARD=17 \ | |
| -DCMAKE_PREFIX_PATH=/work/install \ | |
| install_test | |
| docker run -v ${{ github.workspace }}:/work ghcr.io/cexa-project/kokkos-fft/base_${{ matrix.backend.name }}_${{ needs.check_docker_files.outputs.image_name_suffix }} \ | |
| cmake --build build_test -j $(( $(nproc) * 2 + 1 )) | |
| test: | |
| runs-on: ${{ matrix.backend.runner }} | |
| needs: | |
| - check_docker_files | |
| - build | |
| # run this job even if build_base did not run | |
| if: ${{ ! cancelled() && needs.build.result == 'success' }} | |
| strategy: | |
| matrix: | |
| backend: | |
| # run CUDA tests on Ruche supercomputer | |
| - name: cuda | |
| runner: [self-hosted, cuda] | |
| # run OpenMP tests on Azure server | |
| - name: openmp | |
| runner: ubuntu-latest | |
| steps: | |
| - name: Get artifacts | |
| # use v3 as more recent versions cannot run on Ruche | |
| uses: actions/download-artifact@v3 | |
| with: | |
| name: tests_${{ matrix.backend.name }} | |
| - name: Deploy artifacts | |
| run: tar -xvf tests_${{ matrix.backend.name }}.tar | |
| - name: Pull Singularity image | |
| # pulling the image in advance seems necessary as sometimes invoking `singularity run` on the image URL fails because it cannot find ghcr.io | |
| run: singularity pull oras://ghcr.io/cexa-project/kokkos-fft/base_${{ matrix.backend.name }}_singularity_${{ needs.check_docker_files.outputs.image_name_suffix }}:latest | |
| if: ${{ matrix.backend.name == 'cuda' }} | |
| - name: Run CUDA tests within Slurm job and Singularity image | |
| run: | | |
| srun --nodes=1 --time=01:00:00 -p gpua100 --gres=gpu:1 \ | |
| singularity run --nv --bind $PWD/build:/work/build -H /work/build base_${{ matrix.backend.name }}_singularity_${{ needs.check_docker_files.outputs.image_name_suffix }}_latest.sif \ | |
| ctest | |
| if: ${{ matrix.backend.name == 'cuda' }} | |
| - name: Run OpenMP tests within Docker image | |
| run: | | |
| docker run -v $PWD/build:/work/build -w /work/build ghcr.io/cexa-project/kokkos-fft/base_${{ matrix.backend.name }}_${{ needs.check_docker_files.outputs.image_name_suffix }} \ | |
| ctest | |
| if: ${{ matrix.backend.name == 'openmp' }} |