diff --git a/docs/.buildinfo b/docs/.buildinfo
index f0477d3..f00a4e5 100644
--- a/docs/.buildinfo
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# Sphinx build info version 1
# This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
-config: ba9a4da7c93cf23b90cf4600186aaebd
+config: bf3fe6fc89ea50d1b6783b8ca2a3c1e7
tags: 645f666f9bcd5a90fca523b33c5a78b7
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--- a/docs/.id_parts.html
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index 09d55db..ec3c0a8 100644
--- a/docs/_modules/index.html
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index e036fb6..3382a00 100644
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@@ -7,7 +7,7 @@
- seqgra.comparator.comparator — seqgra 0.0.3 documentation
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index ac8e706..44e116d 100644
--- a/docs/_modules/seqgra/comparator/curvetablecomparator.html
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- seqgra.comparator.curvetablecomparator — seqgra 0.0.3 documentation
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index a5fc107..21b41ba 100644
--- a/docs/_modules/seqgra/comparator/fietablecomparator.html
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- seqgra.comparator.fietablecomparator — seqgra 0.0.3 documentation
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index 2ce8568..91e701e 100644
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- seqgra.comparator.prcomparator — seqgra 0.0.3 documentation
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index 5689a02..b1e6155 100644
--- a/docs/_modules/seqgra/comparator/roccomparator.html
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- seqgra.comparator.roccomparator — seqgra 0.0.3 documentation
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index 8c300e3..ba368c3 100644
--- a/docs/_modules/seqgra/comparator/tablecomparator.html
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- seqgra.comparator.tablecomparator — seqgra 0.0.3 documentation
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index b71dea5..9c81231 100644
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- seqgra.constants — seqgra 0.0.3 documentation
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+ 0.0.4
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index 06b9671..bffba05 100644
--- a/docs/_modules/seqgra/evaluator/evaluator.html
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- seqgra.evaluator.evaluator — seqgra 0.0.3 documentation
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index ee08aba..fc7d593 100644
--- a/docs/_modules/seqgra/evaluator/explainer/backprop.html
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- seqgra.evaluator.explainer.backprop — seqgra 0.0.3 documentation
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--- a/docs/_modules/seqgra/evaluator/explainer/deeplift.html
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- seqgra.evaluator.explainer.deeplift — seqgra 0.0.3 documentation
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--- a/docs/_modules/seqgra/evaluator/explainer/feedback.html
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- seqgra.evaluator.explainer.feedback — seqgra 0.0.3 documentation
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- seqgra.evaluator.explainer.gradcam — seqgra 0.0.3 documentation
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- seqgra.evaluator.explainer.occlusion — seqgra 0.0.3 documentation
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--- a/docs/_modules/seqgra/evaluator/explainer/path.html
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- seqgra.evaluator.explainer.path — seqgra 0.0.3 documentation
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--- a/docs/_modules/seqgra/evaluator/explainer/patterns.html
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- seqgra.evaluator.explainer.patterns — seqgra 0.0.3 documentation
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--- a/docs/_modules/seqgra/evaluator/explainer/perturbation.html
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- seqgra.evaluator.explainer.perturbation — seqgra 0.0.3 documentation
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- seqgra.evaluator.explainer.real_time.pytorch_fixes — seqgra 0.0.3 documentation
+ seqgra.evaluator.explainer.real_time.pytorch_fixes — seqgra 0.0.4 documentation
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- seqgra.evaluator.explainer.real_time.resnet_encoder — seqgra 0.0.3 documentation
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- seqgra.evaluator.explainer.real_time.saliency_eval — seqgra 0.0.3 documentation
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- seqgra.evaluator.gradientbased.abstractdifferencegradientevaluator — seqgra 0.0.3 documentation
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- seqgra.evaluator.gradientbased.abstractgradientevaluator — seqgra 0.0.3 documentation
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- seqgra.evaluator.gradientbased.contrastiveexcitationbackpropevaluator — seqgra 0.0.3 documentation
+ seqgra.evaluator.gradientbased.contrastiveexcitationbackpropevaluator — seqgra 0.0.4 documentation
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- seqgra.evaluator.gradientbased.differencegradientevaluator — seqgra 0.0.3 documentation
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index 6838ad2..90a787b 100644
--- a/docs/_modules/seqgra/evaluator/gradientbased/ebphelper.html
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- seqgra.evaluator.gradientbased.ebphelper — seqgra 0.0.3 documentation
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- seqgra.evaluator.gradientbased.excitationbackpropevaluator — seqgra 0.0.3 documentation
+ seqgra.evaluator.gradientbased.excitationbackpropevaluator — seqgra 0.0.4 documentation
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- seqgra.evaluator.gradientbased.gradientevaluator — seqgra 0.0.3 documentation
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- seqgra.evaluator.gradientbased.integratedgradientevaluator — seqgra 0.0.3 documentation
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nspecifi:10,until:78,up:[65,78],upon:11,upsampler_bas:38,upsampler_block:38,upsampler_kernel_s:38,upsampler_scal:38,us:[2,3,4,6,7,10,11,12,15,30,38,39,48,60,65,74,93,99,102,103,104,106,116],usag:[2,3,4,5,6,65],use_inp:32,use_input:51,use_simple_activ:38,user:[30,38,39,48],usual:[10,74],util:[6,8,11,38,39,82,83,129],v:[2,3,4,5,34,57],val:4,val_:78,valid:[2,5,7,8,10,12,22,60,65,71,72,74,75,78,80,84,104,106],valid_condit:[102,104],valid_sequence_el:[102,104],validate_data:[67,71,72,74,75,80,84],validation_dataset:[79,83],validation_set_fract:110,valu:[7,8,30,38,39,40,48,65,74,78,93,107],valueerror:[65,107],values_over_entire_backselect:65,vanilla:47,vanilladifferencegradexplain:26,vanillagradexplain:[26,32],variabl:[7,40,74],variant:65,variou:[6,15,19,20],version:[2,3,4,5,6,38,39,65,104,106],view:12,violin:8,visibl:[2,3],w:[30,40,48],wa:6,wai:[7,65],want:40,warn:2,we:[8,10,11,38,39,65],weight:[12,30,38,39,48],well:[38,39],were:[12,30,48,65],weren:[30,48],what:[6,65],when:[10,38,39,65],where:[4,7,8,65],whether:[30,38,39,48,71,72,74,75,80,84],which:[3,7,8,10,11,12,65],whole:[38,39],whose:[11,38,39,65],wide:[10,12],width:[7,8,10],width_per_group:39,window:[7,8,10,12,14],window_shap:33,within:[38,39,78],without:74,won:[38,39],word:65,work:11,wrap:[38,39],write:61,write_analysis_script:110,write_data_definition_fil:110,write_data_definition_to_fil:[124,126],write_model_definition_fil:110,write_model_definition_to_fil:[125,127],write_session_info:[70,71,79,80,83,84,122],writer:[6,14],x:[2,3,8,12,14,22,31,38,39,42,43,44,45,46,47,49,50,51,52,53,54,55,56,57,58,59,65,66,70,71,72,74,75,79,80,82,83,84,107,128],x_sis_i:65,x_train:[71,72,74,75,80,84],x_val:[71,72,74,75,80,84],xi:57,xml:[2,3,4,7,8,10,12,101,104,105,106,123,129],xml_config:[104,106],xmldatadefinitionpars:[14,101],xmldatadefinitionwrit:[14,123],xmlhelper:[14,101],xmlmodeldefinitionpars:[14,101],xmlmodeldefinitionwrit:[14,123],xpu:[38,39],y1:[42,47,59],y2:[42,47,59],y:[3,8,14,17,43,44,45,46,49,50,51,52,53,54,55,56,57,58,70,71,72,74,75,79,80,82,83,84,107,117],y_hat:[17,19,20,62,63],y_train:[71,72,74,75,80,84],y_true:[19,20,62,63],y_val:[71,72,74,75,80,84],yield:[38,39],you:[11,30,38,39,40,48,65],your:[11,38,39],z0:[7,12],za:[7,12],zero:[7,27,30,38,39,48,65,93],zero_grad:[38,39],zero_init_residu:39,zf:7},titles:["<no title>","Command line utilities","seqgra core functionality","seqgra attribution","seqgra ensemble","seqgra summary","seqgra","Data definition","Usage examples","Index","ID conventions","Introduction","Model definition","Python Module Index","seqgra package","seqgra.comparator package","seqgra.comparator.comparator module","seqgra.comparator.curvetablecomparator module","seqgra.comparator.fietablecomparator module","seqgra.comparator.prcomparator module","seqgra.comparator.roccomparator module","seqgra.comparator.tablecomparator module","seqgra.constants module","seqgra.evaluator package","seqgra.evaluator.evaluator module","seqgra.evaluator.explainer namespace","seqgra.evaluator.explainer.backprop module","seqgra.evaluator.explainer.deeplift module","seqgra.evaluator.explainer.ebp package","seqgra.evaluator.explainer.ebp.ebp module","seqgra.evaluator.explainer.ebp.functions module","seqgra.evaluator.explainer.feedback module","seqgra.evaluator.explainer.gradcam module","seqgra.evaluator.explainer.occlusion module","seqgra.evaluator.explainer.path module","seqgra.evaluator.explainer.patterns module","seqgra.evaluator.explainer.perturbation module","seqgra.evaluator.explainer.real_time package","seqgra.evaluator.explainer.real_time.pytorch_fixes module","seqgra.evaluator.explainer.real_time.resnet_encoder module","seqgra.evaluator.explainer.real_time.saliency_eval module","seqgra.evaluator.gradientbased package","seqgra.evaluator.gradientbased.abstractdifferencegradientevaluator module","seqgra.evaluator.gradientbased.abstractgradientevaluator module","seqgra.evaluator.gradientbased.contrastiveexcitationbackpropevaluator module","seqgra.evaluator.gradientbased.deconvevaluator module","seqgra.evaluator.gradientbased.deepliftevaluator module","seqgra.evaluator.gradientbased.differencegradientevaluator module","seqgra.evaluator.gradientbased.ebphelper module","seqgra.evaluator.gradientbased.excitationbackpropevaluator module","seqgra.evaluator.gradientbased.feedbackevaluator module","seqgra.evaluator.gradientbased.gradcamgradientevaluator module","seqgra.evaluator.gradientbased.gradientbasedevaluator module","seqgra.evaluator.gradientbased.gradientevaluator module","seqgra.evaluator.gradientbased.gradientxinputevaluator module","seqgra.evaluator.gradientbased.guidedbackpropevaluator module","seqgra.evaluator.gradientbased.integratedgradientevaluator module","seqgra.evaluator.gradientbased.nonlinearintegratedgradientevaluator module","seqgra.evaluator.gradientbased.saliencyevaluator module","seqgra.evaluator.gradientbased.smoothgradevaluator module","seqgra.evaluator.metricsevaluator module","seqgra.evaluator.predictevaluator module","seqgra.evaluator.prevaluator module","seqgra.evaluator.rocevaluator module","seqgra.evaluator.sis package","seqgra.evaluator.sis.sis module","seqgra.evaluator.sisevaluator module","seqgra.idresolver module","seqgra.learner package","seqgra.learner.bayes package","seqgra.learner.bayes.bayeshelper module","seqgra.learner.bayes.bayeslearner module","seqgra.learner.dna module","seqgra.learner.dnahelper module","seqgra.learner.learner module","seqgra.learner.protein module","seqgra.learner.proteinhelper module","seqgra.learner.tensorflow package","seqgra.learner.tensorflow.kerascallback module","seqgra.learner.tensorflow.kerashelper module","seqgra.learner.tensorflow.keraslearner module","seqgra.learner.torch package","seqgra.learner.torch.torchdataset module","seqgra.learner.torch.torchhelper module","seqgra.learner.torch.torchlearner module","seqgra.misc module","seqgra.model package","seqgra.model.data package","seqgra.model.data.alphabetdistribution module","seqgra.model.data.background module","seqgra.model.data.condition module","seqgra.model.data.datadefinition module","seqgra.model.data.datageneration module","seqgra.model.data.operation module","seqgra.model.data.rule module","seqgra.model.data.sequenceelement 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nspecifi:10,until:78,up:[65,78],upon:11,upsampler_bas:38,upsampler_block:38,upsampler_kernel_s:38,upsampler_scal:38,us:[2,3,4,6,7,10,11,12,15,30,38,39,48,60,65,74,93,99,102,103,104,106,116],usag:[2,3,4,5,6,65],use_inp:32,use_input:51,use_simple_activ:38,user:[30,38,39,48],usual:[10,74],util:[6,8,11,38,39,82,83,129],v:[2,3,4,5,34,57],val:4,val_:78,valid:[2,5,7,8,10,12,22,60,65,71,72,74,75,78,80,84,104,106],valid_condit:[102,104],valid_sequence_el:[102,104],validate_data:[67,71,72,74,75,80,84],validation_dataset:[79,83],validation_set_fract:110,valu:[7,8,30,38,39,40,48,65,74,78,93,107],valueerror:[65,107],values_over_entire_backselect:65,vanilla:47,vanilladifferencegradexplain:26,vanillagradexplain:[26,32],variabl:[7,40,74],variant:65,variou:[6,15,19,20],version:[2,3,4,5,6,38,39,65,104,106],view:12,violin:8,visibl:[2,3],w:[30,40,48],wa:6,wai:[7,65],want:40,warn:2,we:[8,10,11,38,39,65],weight:[12,30,38,39,48],well:[38,39],were:[12,30,48,65],weren:[30,48],what:[6,65],when:[10,38,39,65],where:[4,7,8,65],whether:[30,38,39,48,71,72,74,75,80,84],which:[3,7,8,10,11,12,65],whole:[38,39],whose:[11,38,39,65],wide:[10,12],width:[7,8,10],width_per_group:39,window:[7,8,10,12,14],window_shap:33,within:[38,39,78],without:74,won:[38,39],word:65,work:11,wrap:[38,39],write:61,write_analysis_script:110,write_data_definition_fil:110,write_data_definition_to_fil:[124,126],write_model_definition_fil:110,write_model_definition_to_fil:[125,127],write_session_info:[70,71,79,80,83,84,122],writer:[6,14],x:[2,3,8,12,14,22,31,38,39,42,43,44,45,46,47,49,50,51,52,53,54,55,56,57,58,59,65,66,70,71,72,74,75,79,80,82,83,84,107,128],x_sis_i:65,x_train:[71,72,74,75,80,84],x_val:[71,72,74,75,80,84],xi:57,xml:[2,3,4,7,8,10,12,101,104,105,106,123,129],xml_config:[104,106],xmldatadefinitionpars:[14,101],xmldatadefinitionwrit:[14,123],xmlhelper:[14,101],xmlmodeldefinitionpars:[14,101],xmlmodeldefinitionwrit:[14,123],xpu:[38,39],y1:[42,47,59],y2:[42,47,59],y:[3,8,14,17,43,44,45,46,49,50,51,52,53,54,55,56,57,58,70,71,72,74,75,79,80,82,83,84,107,117],y_hat:[17,19,20,62,63],y_train:[71,72,74,75,80,84],y_true:[19,20,62,63],y_val:[71,72,74,75,80,84],yield:[38,39],you:[11,30,38,39,40,48,65],your:[11,38,39],z0:[7,12],za:[7,12],zero:[7,27,30,38,39,48,65,93],zero_grad:[38,39],zero_init_residu:39,zf:7},titles:["<no title>","Command line utilities","seqgra core functionality","seqgra attribution","seqgra ensemble","seqgra summary","seqgra","Data definition","Usage examples","Index","ID conventions","Introduction","Model definition","Python Module Index","seqgra package","seqgra.comparator package","seqgra.comparator.comparator module","seqgra.comparator.curvetablecomparator module","seqgra.comparator.fietablecomparator module","seqgra.comparator.prcomparator module","seqgra.comparator.roccomparator module","seqgra.comparator.tablecomparator module","seqgra.constants module","seqgra.evaluator package","seqgra.evaluator.evaluator module","seqgra.evaluator.explainer namespace","seqgra.evaluator.explainer.backprop module","seqgra.evaluator.explainer.deeplift module","seqgra.evaluator.explainer.ebp package","seqgra.evaluator.explainer.ebp.ebp module","seqgra.evaluator.explainer.ebp.functions module","seqgra.evaluator.explainer.feedback module","seqgra.evaluator.explainer.gradcam module","seqgra.evaluator.explainer.occlusion module","seqgra.evaluator.explainer.path module","seqgra.evaluator.explainer.patterns module","seqgra.evaluator.explainer.perturbation module","seqgra.evaluator.explainer.real_time package","seqgra.evaluator.explainer.real_time.pytorch_fixes module","seqgra.evaluator.explainer.real_time.resnet_encoder module","seqgra.evaluator.explainer.real_time.saliency_eval module","seqgra.evaluator.gradientbased package","seqgra.evaluator.gradientbased.abstractdifferencegradientevaluator module","seqgra.evaluator.gradientbased.abstractgradientevaluator module","seqgra.evaluator.gradientbased.contrastiveexcitationbackpropevaluator module","seqgra.evaluator.gradientbased.deconvevaluator module","seqgra.evaluator.gradientbased.deepliftevaluator module","seqgra.evaluator.gradientbased.differencegradientevaluator module","seqgra.evaluator.gradientbased.ebphelper module","seqgra.evaluator.gradientbased.excitationbackpropevaluator module","seqgra.evaluator.gradientbased.feedbackevaluator module","seqgra.evaluator.gradientbased.gradcamgradientevaluator module","seqgra.evaluator.gradientbased.gradientbasedevaluator module","seqgra.evaluator.gradientbased.gradientevaluator module","seqgra.evaluator.gradientbased.gradientxinputevaluator module","seqgra.evaluator.gradientbased.guidedbackpropevaluator module","seqgra.evaluator.gradientbased.integratedgradientevaluator module","seqgra.evaluator.gradientbased.nonlinearintegratedgradientevaluator module","seqgra.evaluator.gradientbased.saliencyevaluator module","seqgra.evaluator.gradientbased.smoothgradevaluator module","seqgra.evaluator.metricsevaluator module","seqgra.evaluator.predictevaluator module","seqgra.evaluator.prevaluator module","seqgra.evaluator.rocevaluator module","seqgra.evaluator.sis package","seqgra.evaluator.sis.sis module","seqgra.evaluator.sisevaluator module","seqgra.idresolver module","seqgra.learner package","seqgra.learner.bayes package","seqgra.learner.bayes.bayeshelper module","seqgra.learner.bayes.bayeslearner module","seqgra.learner.dna module","seqgra.learner.dnahelper module","seqgra.learner.learner module","seqgra.learner.protein module","seqgra.learner.proteinhelper module","seqgra.learner.tensorflow package","seqgra.learner.tensorflow.kerascallback module","seqgra.learner.tensorflow.kerashelper module","seqgra.learner.tensorflow.keraslearner module","seqgra.learner.torch package","seqgra.learner.torch.torchdataset module","seqgra.learner.torch.torchhelper module","seqgra.learner.torch.torchlearner module","seqgra.misc module","seqgra.model package","seqgra.model.data package","seqgra.model.data.alphabetdistribution module","seqgra.model.data.background module","seqgra.model.data.condition module","seqgra.model.data.datadefinition module","seqgra.model.data.datageneration module","seqgra.model.data.operation module","seqgra.model.data.rule module","seqgra.model.data.sequenceelement 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index e5031ba..d5b8977 100644
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index 7ab9620..59d266f 100644
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index 7981a93..ec60bc8 100644
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index 7595302..d549f5d 100644
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index 99f6973..e93434e 100644
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index fbc1945..cb9174b 100644
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@@ -7,7 +7,7 @@
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index 82db380..da2f176 100644
--- a/docs/seqgra.evaluator.gradientbased.ebphelper.html
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@@ -7,7 +7,7 @@
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@@ -75,7 +75,7 @@
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index a3856a9..4285b7c 100644
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@@ -7,7 +7,7 @@
- seqgra.evaluator.gradientbased.excitationbackpropevaluator module — seqgra 0.0.3 documentation
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@@ -75,7 +75,7 @@
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index 89c7fad..d4eb9c7 100644
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@@ -7,7 +7,7 @@
- seqgra.evaluator.gradientbased.feedbackevaluator module — seqgra 0.0.3 documentation
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@@ -75,7 +75,7 @@
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index e8f69a2..736b145 100644
--- a/docs/seqgra.evaluator.gradientbased.gradcamgradientevaluator.html
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@@ -7,7 +7,7 @@
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@@ -75,7 +75,7 @@
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index e942bf3..8e9edfa 100644
--- a/docs/seqgra.evaluator.gradientbased.gradientbasedevaluator.html
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@@ -7,7 +7,7 @@
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@@ -75,7 +75,7 @@
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index fd08055..2fc0921 100644
--- a/docs/seqgra.evaluator.gradientbased.gradientevaluator.html
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@@ -7,7 +7,7 @@
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@@ -75,7 +75,7 @@
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index 06eb345..532811d 100644
--- a/docs/seqgra.evaluator.gradientbased.gradientxinputevaluator.html
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@@ -7,7 +7,7 @@
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@@ -75,7 +75,7 @@
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index 45a7188..f2ffc32 100644
--- a/docs/seqgra.evaluator.gradientbased.guidedbackpropevaluator.html
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@@ -7,7 +7,7 @@
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@@ -75,7 +75,7 @@
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index 1d16676..3eb6f71 100644
--- a/docs/seqgra.evaluator.gradientbased.html
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@@ -75,7 +75,7 @@
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index f82febd..0b97bab 100644
--- a/docs/seqgra.evaluator.gradientbased.integratedgradientevaluator.html
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@@ -7,7 +7,7 @@
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index 06c1c3b..117227b 100644
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@@ -7,7 +7,7 @@
- seqgra.evaluator.gradientbased.nonlinearintegratedgradientevaluator module — seqgra 0.0.3 documentation
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@@ -75,7 +75,7 @@
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index 5296cde..1c38872 100644
--- a/docs/seqgra.evaluator.gradientbased.saliencyevaluator.html
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@@ -7,7 +7,7 @@
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index 7c1ac5c..94e906a 100644
--- a/docs/seqgra.evaluator.gradientbased.smoothgradevaluator.html
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@@ -7,7 +7,7 @@
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index af341e3..daac1b3 100644
--- a/docs/seqgra.evaluator.html
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index 018f951..a9e8b4a 100644
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index d7b5b79..346560c 100644
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index 31f4691..76979cb 100644
--- a/docs/seqgra.evaluator.prevaluator.html
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index a1c23b9..fd79577 100644
--- a/docs/seqgra.evaluator.rocevaluator.html
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index 51055fb..bc4eed3 100644
--- a/docs/seqgra.evaluator.sis.html
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index f610d64..c66eb07 100644
--- a/docs/seqgra.evaluator.sis.sis.html
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- seqgra.evaluator.sis.sis module — seqgra 0.0.3 documentation
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index 6674061..993261d 100644
--- a/docs/seqgra.evaluator.sisevaluator.html
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index 4bc700f..dd9cc81 100644
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index 11a9345..c847294 100644
--- a/docs/seqgra.idresolver.html
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index d00886a..b3bdc5d 100644
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index b329775..cd32717 100644
--- a/docs/seqgra.learner.dna.html
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@@ -7,7 +7,7 @@
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@@ -75,7 +75,7 @@
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index fcefe89..8a671bb 100644
--- a/docs/seqgra.learner.html
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@@ -7,7 +7,7 @@
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@@ -75,7 +75,7 @@
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index 02376fa..ca48cfc 100644
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@@ -7,7 +7,7 @@
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- seqgra.model.data.condition module — seqgra 0.0.3 documentation
+ seqgra.model.data.condition module — seqgra 0.0.4 documentation
@@ -75,7 +75,7 @@
- 0.0.3
+ 0.0.4
diff --git a/docs/seqgra.model.data.datadefinition.html b/docs/seqgra.model.data.datadefinition.html
index a1a5131..359b55b 100644
--- a/docs/seqgra.model.data.datadefinition.html
+++ b/docs/seqgra.model.data.datadefinition.html
@@ -7,7 +7,7 @@
- seqgra.model.data.datadefinition module — seqgra 0.0.3 documentation
+ seqgra.model.data.datadefinition module — seqgra 0.0.4 documentation
@@ -75,7 +75,7 @@
- 0.0.3
+ 0.0.4
diff --git a/docs/seqgra.model.data.datageneration.html b/docs/seqgra.model.data.datageneration.html
index 08f3210..e700bf0 100644
--- a/docs/seqgra.model.data.datageneration.html
+++ b/docs/seqgra.model.data.datageneration.html
@@ -7,7 +7,7 @@
- seqgra.model.data.datageneration module — seqgra 0.0.3 documentation
+ seqgra.model.data.datageneration module — seqgra 0.0.4 documentation
@@ -75,7 +75,7 @@
- 0.0.3
+ 0.0.4
diff --git a/docs/seqgra.model.data.html b/docs/seqgra.model.data.html
index 133f4b4..a377218 100644
--- a/docs/seqgra.model.data.html
+++ b/docs/seqgra.model.data.html
@@ -7,7 +7,7 @@
- seqgra.model.data package — seqgra 0.0.3 documentation
+ seqgra.model.data package — seqgra 0.0.4 documentation
@@ -75,7 +75,7 @@
- 0.0.3
+ 0.0.4
diff --git a/docs/seqgra.model.data.operation.html b/docs/seqgra.model.data.operation.html
index 45f1b1f..60ad72d 100644
--- a/docs/seqgra.model.data.operation.html
+++ b/docs/seqgra.model.data.operation.html
@@ -7,7 +7,7 @@
- seqgra.model.data.operation module — seqgra 0.0.3 documentation
+ seqgra.model.data.operation module — seqgra 0.0.4 documentation
@@ -75,7 +75,7 @@
- 0.0.3
+ 0.0.4
diff --git a/docs/seqgra.model.data.rule.html b/docs/seqgra.model.data.rule.html
index a553113..789d516 100644
--- a/docs/seqgra.model.data.rule.html
+++ b/docs/seqgra.model.data.rule.html
@@ -7,7 +7,7 @@
- seqgra.model.data.rule module — seqgra 0.0.3 documentation
+ seqgra.model.data.rule module — seqgra 0.0.4 documentation
@@ -75,7 +75,7 @@
- 0.0.3
+ 0.0.4
diff --git a/docs/seqgra.model.data.sequenceelement.html b/docs/seqgra.model.data.sequenceelement.html
index 999651f..bf399a2 100644
--- a/docs/seqgra.model.data.sequenceelement.html
+++ b/docs/seqgra.model.data.sequenceelement.html
@@ -7,7 +7,7 @@
- seqgra.model.data.sequenceelement module — seqgra 0.0.3 documentation
+ seqgra.model.data.sequenceelement module — seqgra 0.0.4 documentation
@@ -75,7 +75,7 @@
- 0.0.3
+ 0.0.4
diff --git a/docs/seqgra.model.data.spacingconstraint.html b/docs/seqgra.model.data.spacingconstraint.html
index 7dbaaef..d5f1776 100644
--- a/docs/seqgra.model.data.spacingconstraint.html
+++ b/docs/seqgra.model.data.spacingconstraint.html
@@ -7,7 +7,7 @@
- seqgra.model.data.spacingconstraint module — seqgra 0.0.3 documentation
+ seqgra.model.data.spacingconstraint module — seqgra 0.0.4 documentation
@@ -75,7 +75,7 @@
- 0.0.3
+ 0.0.4
diff --git a/docs/seqgra.model.html b/docs/seqgra.model.html
index c6a00b7..e6eb427 100644
--- a/docs/seqgra.model.html
+++ b/docs/seqgra.model.html
@@ -7,7 +7,7 @@
- seqgra.model package — seqgra 0.0.3 documentation
+ seqgra.model package — seqgra 0.0.4 documentation
@@ -75,7 +75,7 @@
- 0.0.3
+ 0.0.4
diff --git a/docs/seqgra.model.model.architecture.html b/docs/seqgra.model.model.architecture.html
index 08f024b..94020bb 100644
--- a/docs/seqgra.model.model.architecture.html
+++ b/docs/seqgra.model.model.architecture.html
@@ -7,7 +7,7 @@
- seqgra.model.model.architecture module — seqgra 0.0.3 documentation
+ seqgra.model.model.architecture module — seqgra 0.0.4 documentation
@@ -75,7 +75,7 @@
- 0.0.3
+ 0.0.4
diff --git a/docs/seqgra.model.model.html b/docs/seqgra.model.model.html
index 21c6ff2..5d1a1b7 100644
--- a/docs/seqgra.model.model.html
+++ b/docs/seqgra.model.model.html
@@ -7,7 +7,7 @@
- seqgra.model.model package — seqgra 0.0.3 documentation
+ seqgra.model.model package — seqgra 0.0.4 documentation
@@ -75,7 +75,7 @@
- 0.0.3
+ 0.0.4
diff --git a/docs/seqgra.model.model.modeldefinition.html b/docs/seqgra.model.model.modeldefinition.html
index fbcad2d..b1cb54b 100644
--- a/docs/seqgra.model.model.modeldefinition.html
+++ b/docs/seqgra.model.model.modeldefinition.html
@@ -7,7 +7,7 @@
- seqgra.model.model.modeldefinition module — seqgra 0.0.3 documentation
+ seqgra.model.model.modeldefinition module — seqgra 0.0.4 documentation
@@ -75,7 +75,7 @@
- 0.0.3
+ 0.0.4
diff --git a/docs/seqgra.model.model.operation.html b/docs/seqgra.model.model.operation.html
index 6d758d2..bde0219 100644
--- a/docs/seqgra.model.model.operation.html
+++ b/docs/seqgra.model.model.operation.html
@@ -7,7 +7,7 @@
- seqgra.model.model.operation module — seqgra 0.0.3 documentation
+ seqgra.model.model.operation module — seqgra 0.0.4 documentation
@@ -75,7 +75,7 @@
- 0.0.3
+ 0.0.4
diff --git a/docs/seqgra.parser.datadefinitionparser.html b/docs/seqgra.parser.datadefinitionparser.html
index ff6f5e5..0874c92 100644
--- a/docs/seqgra.parser.datadefinitionparser.html
+++ b/docs/seqgra.parser.datadefinitionparser.html
@@ -7,7 +7,7 @@
- seqgra.parser.datadefinitionparser module — seqgra 0.0.3 documentation
+ seqgra.parser.datadefinitionparser module — seqgra 0.0.4 documentation
@@ -75,7 +75,7 @@
- 0.0.3
+ 0.0.4
diff --git a/docs/seqgra.parser.html b/docs/seqgra.parser.html
index 68afbe5..43e6933 100644
--- a/docs/seqgra.parser.html
+++ b/docs/seqgra.parser.html
@@ -7,7 +7,7 @@
- seqgra.parser package — seqgra 0.0.3 documentation
+ seqgra.parser package — seqgra 0.0.4 documentation
@@ -75,7 +75,7 @@
- 0.0.3
+ 0.0.4
diff --git a/docs/seqgra.parser.modeldefinitionparser.html b/docs/seqgra.parser.modeldefinitionparser.html
index 4ea5176..aa36881 100644
--- a/docs/seqgra.parser.modeldefinitionparser.html
+++ b/docs/seqgra.parser.modeldefinitionparser.html
@@ -7,7 +7,7 @@
- seqgra.parser.modeldefinitionparser module — seqgra 0.0.3 documentation
+ seqgra.parser.modeldefinitionparser module — seqgra 0.0.4 documentation
@@ -75,7 +75,7 @@
- 0.0.3
+ 0.0.4
diff --git a/docs/seqgra.parser.xmldatadefinitionparser.html b/docs/seqgra.parser.xmldatadefinitionparser.html
index 0891db3..dab63ed 100644
--- a/docs/seqgra.parser.xmldatadefinitionparser.html
+++ b/docs/seqgra.parser.xmldatadefinitionparser.html
@@ -7,7 +7,7 @@
- seqgra.parser.xmldatadefinitionparser module — seqgra 0.0.3 documentation
+ seqgra.parser.xmldatadefinitionparser module — seqgra 0.0.4 documentation
@@ -75,7 +75,7 @@
- 0.0.3
+ 0.0.4
diff --git a/docs/seqgra.parser.xmlhelper.html b/docs/seqgra.parser.xmlhelper.html
index 42bd179..4608f21 100644
--- a/docs/seqgra.parser.xmlhelper.html
+++ b/docs/seqgra.parser.xmlhelper.html
@@ -7,7 +7,7 @@
- seqgra.parser.xmlhelper module — seqgra 0.0.3 documentation
+ seqgra.parser.xmlhelper module — seqgra 0.0.4 documentation
@@ -75,7 +75,7 @@
- 0.0.3
+ 0.0.4
diff --git a/docs/seqgra.parser.xmlmodeldefinitionparser.html b/docs/seqgra.parser.xmlmodeldefinitionparser.html
index 0448109..1de819b 100644
--- a/docs/seqgra.parser.xmlmodeldefinitionparser.html
+++ b/docs/seqgra.parser.xmlmodeldefinitionparser.html
@@ -7,7 +7,7 @@
- seqgra.parser.xmlmodeldefinitionparser module — seqgra 0.0.3 documentation
+ seqgra.parser.xmlmodeldefinitionparser module — seqgra 0.0.4 documentation
@@ -75,7 +75,7 @@
- 0.0.3
+ 0.0.4
diff --git a/docs/seqgra.schema.html b/docs/seqgra.schema.html
index be950d2..dbf5fbb 100644
--- a/docs/seqgra.schema.html
+++ b/docs/seqgra.schema.html
@@ -7,7 +7,7 @@
- seqgra.schema module — seqgra 0.0.3 documentation
+ seqgra.schema module — seqgra 0.0.4 documentation
@@ -75,7 +75,7 @@
- 0.0.3
+ 0.0.4
diff --git a/docs/seqgra.seqgra.html b/docs/seqgra.seqgra.html
index 9caac16..ff01281 100644
--- a/docs/seqgra.seqgra.html
+++ b/docs/seqgra.seqgra.html
@@ -7,7 +7,7 @@
- seqgra.seqgra module — seqgra 0.0.3 documentation
+ seqgra.seqgra module — seqgra 0.0.4 documentation
@@ -75,7 +75,7 @@
- 0.0.3
+ 0.0.4
diff --git a/docs/seqgra.seqgraa.html b/docs/seqgra.seqgraa.html
index 1a297f0..73ffee8 100644
--- a/docs/seqgra.seqgraa.html
+++ b/docs/seqgra.seqgraa.html
@@ -7,7 +7,7 @@
- seqgra.seqgraa module — seqgra 0.0.3 documentation
+ seqgra.seqgraa module — seqgra 0.0.4 documentation
@@ -75,7 +75,7 @@
- 0.0.3
+ 0.0.4
diff --git a/docs/seqgra.seqgrae.html b/docs/seqgra.seqgrae.html
index 34a7787..169828d 100644
--- a/docs/seqgra.seqgrae.html
+++ b/docs/seqgra.seqgrae.html
@@ -7,7 +7,7 @@
- seqgra.seqgrae module — seqgra 0.0.3 documentation
+ seqgra.seqgrae module — seqgra 0.0.4 documentation
@@ -75,7 +75,7 @@
- 0.0.3
+ 0.0.4
diff --git a/docs/seqgra.seqgras.html b/docs/seqgra.seqgras.html
index e06ec0d..591e19a 100644
--- a/docs/seqgra.seqgras.html
+++ b/docs/seqgra.seqgras.html
@@ -7,7 +7,7 @@
- seqgra.seqgras module — seqgra 0.0.3 documentation
+ seqgra.seqgras module — seqgra 0.0.4 documentation
@@ -75,7 +75,7 @@
- 0.0.3
+ 0.0.4
diff --git a/docs/seqgra.simulator.backgroundgenerator.html b/docs/seqgra.simulator.backgroundgenerator.html
index 9a5cc10..970e86b 100644
--- a/docs/seqgra.simulator.backgroundgenerator.html
+++ b/docs/seqgra.simulator.backgroundgenerator.html
@@ -7,7 +7,7 @@
- seqgra.simulator.backgroundgenerator module — seqgra 0.0.3 documentation
+ seqgra.simulator.backgroundgenerator module — seqgra 0.0.4 documentation
@@ -75,7 +75,7 @@
- 0.0.3
+ 0.0.4
diff --git a/docs/seqgra.simulator.example.html b/docs/seqgra.simulator.example.html
index 058de07..002e555 100644
--- a/docs/seqgra.simulator.example.html
+++ b/docs/seqgra.simulator.example.html
@@ -7,7 +7,7 @@
- seqgra.simulator.example module — seqgra 0.0.3 documentation
+ seqgra.simulator.example module — seqgra 0.0.4 documentation
@@ -75,7 +75,7 @@
- 0.0.3
+ 0.0.4
diff --git a/docs/seqgra.simulator.examplegenerator.html b/docs/seqgra.simulator.examplegenerator.html
index ed6b392..614a0d5 100644
--- a/docs/seqgra.simulator.examplegenerator.html
+++ b/docs/seqgra.simulator.examplegenerator.html
@@ -7,7 +7,7 @@
- seqgra.simulator.examplegenerator module — seqgra 0.0.3 documentation
+ seqgra.simulator.examplegenerator module — seqgra 0.0.4 documentation
@@ -75,7 +75,7 @@
- 0.0.3
+ 0.0.4
diff --git a/docs/seqgra.simulator.heatmap.heatmap.html b/docs/seqgra.simulator.heatmap.heatmap.html
index 2fc6bcc..1516843 100644
--- a/docs/seqgra.simulator.heatmap.heatmap.html
+++ b/docs/seqgra.simulator.heatmap.heatmap.html
@@ -7,7 +7,7 @@
- seqgra.simulator.heatmap.heatmap module — seqgra 0.0.3 documentation
+ seqgra.simulator.heatmap.heatmap module — seqgra 0.0.4 documentation
@@ -75,7 +75,7 @@
- 0.0.3
+ 0.0.4
diff --git a/docs/seqgra.simulator.heatmap.html b/docs/seqgra.simulator.heatmap.html
index 8c2663f..f309c18 100644
--- a/docs/seqgra.simulator.heatmap.html
+++ b/docs/seqgra.simulator.heatmap.html
@@ -7,7 +7,7 @@
- seqgra.simulator.heatmap package — seqgra 0.0.3 documentation
+ seqgra.simulator.heatmap package — seqgra 0.0.4 documentation
@@ -75,7 +75,7 @@
- 0.0.3
+ 0.0.4
diff --git a/docs/seqgra.simulator.html b/docs/seqgra.simulator.html
index 8c9af85..d561d1d 100644
--- a/docs/seqgra.simulator.html
+++ b/docs/seqgra.simulator.html
@@ -7,7 +7,7 @@
- seqgra.simulator package — seqgra 0.0.3 documentation
+ seqgra.simulator package — seqgra 0.0.4 documentation
@@ -75,7 +75,7 @@
- 0.0.3
+ 0.0.4
diff --git a/docs/seqgra.simulator.motif.ess.html b/docs/seqgra.simulator.motif.ess.html
index ba42aff..d12d8d9 100644
--- a/docs/seqgra.simulator.motif.ess.html
+++ b/docs/seqgra.simulator.motif.ess.html
@@ -7,7 +7,7 @@
- seqgra.simulator.motif.ess module — seqgra 0.0.3 documentation
+ seqgra.simulator.motif.ess module — seqgra 0.0.4 documentation
@@ -75,7 +75,7 @@
- 0.0.3
+ 0.0.4
diff --git a/docs/seqgra.simulator.motif.html b/docs/seqgra.simulator.motif.html
index 6132559..63a7ace 100644
--- a/docs/seqgra.simulator.motif.html
+++ b/docs/seqgra.simulator.motif.html
@@ -7,7 +7,7 @@
- seqgra.simulator.motif package — seqgra 0.0.3 documentation
+ seqgra.simulator.motif package — seqgra 0.0.4 documentation
@@ -75,7 +75,7 @@
- 0.0.3
+ 0.0.4
diff --git a/docs/seqgra.simulator.motif.kld.html b/docs/seqgra.simulator.motif.kld.html
index 5ef2e57..eb5d454 100644
--- a/docs/seqgra.simulator.motif.kld.html
+++ b/docs/seqgra.simulator.motif.kld.html
@@ -7,7 +7,7 @@
- seqgra.simulator.motif.kld module — seqgra 0.0.3 documentation
+ seqgra.simulator.motif.kld module — seqgra 0.0.4 documentation
@@ -75,7 +75,7 @@
- 0.0.3
+ 0.0.4
diff --git a/docs/seqgra.simulator.motif.motifinfo.html b/docs/seqgra.simulator.motif.motifinfo.html
index 97f1df2..ce7e6e8 100644
--- a/docs/seqgra.simulator.motif.motifinfo.html
+++ b/docs/seqgra.simulator.motif.motifinfo.html
@@ -7,7 +7,7 @@
- seqgra.simulator.motif.motifinfo module — seqgra 0.0.3 documentation
+ seqgra.simulator.motif.motifinfo module — seqgra 0.0.4 documentation
@@ -75,7 +75,7 @@
- 0.0.3
+ 0.0.4
diff --git a/docs/seqgra.simulator.simulator.html b/docs/seqgra.simulator.simulator.html
index 5420d31..4189b74 100644
--- a/docs/seqgra.simulator.simulator.html
+++ b/docs/seqgra.simulator.simulator.html
@@ -7,7 +7,7 @@
- seqgra.simulator.simulator module — seqgra 0.0.3 documentation
+ seqgra.simulator.simulator module — seqgra 0.0.4 documentation
@@ -75,7 +75,7 @@
- 0.0.3
+ 0.0.4
diff --git a/docs/seqgra.writer.datadefinitionwriter.html b/docs/seqgra.writer.datadefinitionwriter.html
index f376364..49d7d74 100644
--- a/docs/seqgra.writer.datadefinitionwriter.html
+++ b/docs/seqgra.writer.datadefinitionwriter.html
@@ -7,7 +7,7 @@
- seqgra.writer.datadefinitionwriter module — seqgra 0.0.3 documentation
+ seqgra.writer.datadefinitionwriter module — seqgra 0.0.4 documentation
@@ -75,7 +75,7 @@
- 0.0.3
+ 0.0.4
diff --git a/docs/seqgra.writer.html b/docs/seqgra.writer.html
index 68aaacd..d0babb9 100644
--- a/docs/seqgra.writer.html
+++ b/docs/seqgra.writer.html
@@ -7,7 +7,7 @@
- seqgra.writer package — seqgra 0.0.3 documentation
+ seqgra.writer package — seqgra 0.0.4 documentation
@@ -75,7 +75,7 @@
- 0.0.3
+ 0.0.4
diff --git a/docs/seqgra.writer.modeldefinitionwriter.html b/docs/seqgra.writer.modeldefinitionwriter.html
index 47dceda..7ece16d 100644
--- a/docs/seqgra.writer.modeldefinitionwriter.html
+++ b/docs/seqgra.writer.modeldefinitionwriter.html
@@ -7,7 +7,7 @@
- seqgra.writer.modeldefinitionwriter module — seqgra 0.0.3 documentation
+ seqgra.writer.modeldefinitionwriter module — seqgra 0.0.4 documentation
@@ -75,7 +75,7 @@
- 0.0.3
+ 0.0.4
diff --git a/docs/seqgra.writer.xmldatadefinitionwriter.html b/docs/seqgra.writer.xmldatadefinitionwriter.html
index 6521e82..012cdfe 100644
--- a/docs/seqgra.writer.xmldatadefinitionwriter.html
+++ b/docs/seqgra.writer.xmldatadefinitionwriter.html
@@ -7,7 +7,7 @@
- seqgra.writer.xmldatadefinitionwriter module — seqgra 0.0.3 documentation
+ seqgra.writer.xmldatadefinitionwriter module — seqgra 0.0.4 documentation
@@ -75,7 +75,7 @@
- 0.0.3
+ 0.0.4
diff --git a/docs/seqgra.writer.xmlmodeldefinitionwriter.html b/docs/seqgra.writer.xmlmodeldefinitionwriter.html
index 2d590c2..9a8f972 100644
--- a/docs/seqgra.writer.xmlmodeldefinitionwriter.html
+++ b/docs/seqgra.writer.xmlmodeldefinitionwriter.html
@@ -7,7 +7,7 @@
- seqgra.writer.xmlmodeldefinitionwriter module — seqgra 0.0.3 documentation
+ seqgra.writer.xmlmodeldefinitionwriter module — seqgra 0.0.4 documentation
@@ -75,7 +75,7 @@
- 0.0.3
+ 0.0.4
diff --git a/docs/slec.html b/docs/slec.html
index 4a413d7..06de1d5 100644
--- a/docs/slec.html
+++ b/docs/slec.html
@@ -7,7 +7,7 @@
- Simulators, Learners, Evaluators, Comparators — seqgra 0.0.3 documentation
+ Simulators, Learners, Evaluators, Comparators — seqgra 0.0.4 documentation
@@ -75,7 +75,7 @@
- 0.0.3
+ 0.0.4
diff --git a/docs/structure.html b/docs/structure.html
index bb00ade..ea63457 100644
--- a/docs/structure.html
+++ b/docs/structure.html
@@ -7,7 +7,7 @@
- output folder structure — seqgra 0.0.3 documentation
+ output folder structure — seqgra 0.0.4 documentation
@@ -75,7 +75,7 @@
- 0.0.3
+ 0.0.4
diff --git a/seqgra/__init__.py b/seqgra/__init__.py
index e3c2c92..3d0d270 100644
--- a/seqgra/__init__.py
+++ b/seqgra/__init__.py
@@ -21,4 +21,4 @@
from seqgra.schema import ModelSize
from seqgra.schema import ProbabilisticToken
from seqgra.misc import MiscHelper
-__version__ = "0.0.3"
+__version__ = "0.0.4"